RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 CIZ1Q9ULV3 898 aaPredicted RBP14.2□□□□□ -0.14
SIN3A-208ENST00000567289 FBLN1P23142 703 aa14.2□□□□□ -0.14
SIN3A-208ENST00000567289 TMPOP42166 694 aaKnown RBP14.2□□□□□ -0.14
SIN3A-208ENST00000567289 CEBPZQ03701 1054 aaKnown RBP14.2□□□□□ -0.14
SIN3A-208ENST00000567289 DCTN1Q14203 1278 aa14.2□□□□□ -0.14
SIN3A-208ENST00000567289 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
SIN3A-208ENST00000567289 DENND4BO75064 1496 aaPredicted RBP14.2□□□□□ -0.14
SIN3A-208ENST00000567289 GCC1Q96CN9 775 aa14.2□□□□□ -0.14
SIN3A-208ENST00000567289 BAG4O95429 457 aaKnown RBP14.19□□□□□ -0.14
SIN3A-208ENST00000567289 FAM184AQ8NB25 1140 aa14.19□□□□□ -0.14
SIN3A-208ENST00000567289 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
SIN3A-208ENST00000567289 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
SIN3A-208ENST00000567289 IGSF3O75054 1194 aa14.19□□□□□ -0.14
SIN3A-208ENST00000567289 HOMER1Q86YM7 354 aa14.18□□□□□ -0.14
SIN3A-208ENST00000567289 FMNL2Q96PY5 1086 aa14.18□□□□□ -0.14
SIN3A-208ENST00000567289 USP25Q9UHP3 1055 aa14.18□□□□□ -0.14
SIN3A-208ENST00000567289 EXOC6BQ9Y2D4 811 aa14.18□□□□□ -0.14
SIN3A-208ENST00000567289 PER1O15534 1290 aaPredicted RBP14.18□□□□□ -0.14
SIN3A-208ENST00000567289 TBC1D9Q6ZT07 1266 aa14.18□□□□□ -0.14
SIN3A-208ENST00000567289 HECW1Q76N89 1606 aa14.18□□□□□ -0.14
SIN3A-208ENST00000567289 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
SIN3A-208ENST00000567289 TSHZ3Q63HK5 1081 aa14.18□□□□□ -0.14
SIN3A-208ENST00000567289 THOC2Q8NI27 1593 aaKnown RBP14.18□□□□□ -0.14
SIN3A-208ENST00000567289 HTATSF1O43719 755 aaKnown RBP14.17□□□□□ -0.14
SIN3A-208ENST00000567289 IL1RAPL2Q9NP60 686 aa14.17□□□□□ -0.14
SIN3A-208ENST00000567289 TSPYL4Q9UJ04 414 aa14.17□□□□□ -0.14
SIN3A-208ENST00000567289 TPD52L1Q16890 204 aaPredicted RBP14.16□□□□□ -0.14
SIN3A-208ENST00000567289 GORABQ5T7V8 394 aa14.16□□□□□ -0.14
SIN3A-208ENST00000567289 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
SIN3A-208ENST00000567289 FERMT3Q86UX7 667 aa14.16□□□□□ -0.14
SIN3A-208ENST00000567289 TCOF1Q13428 1488 aaKnown RBP14.16□□□□□ -0.14
SIN3A-208ENST00000567289 ROCK1Q13464 1354 aa14.16□□□□□ -0.14
SIN3A-208ENST00000567289 SURF6O75683 361 aaKnown RBP14.16□□□□□ -0.14
SIN3A-208ENST00000567289 ZKSCAN1P17029 563 aaPredicted RBP14.16□□□□□ -0.14
SIN3A-208ENST00000567289 NGDNQ8NEJ9 315 aaKnown RBP14.16□□□□□ -0.14
SIN3A-208ENST00000567289 MIS18AQ9NYP9 233 aa14.16□□□□□ -0.14
SIN3A-208ENST00000567289 MTERF4Q7Z6M4 381 aaKnown RBP14.15□□□□□ -0.14
SIN3A-208ENST00000567289 KDM2BQ8NHM5 1336 aa14.15□□□□□ -0.14
SIN3A-208ENST00000567289 SASS6Q6UVJ0 657 aa14.15□□□□□ -0.14
SIN3A-208ENST00000567289 ERC2O15083 957 aa14.15□□□□□ -0.14
SIN3A-208ENST00000567289 KDM4AO75164 1064 aa14.15□□□□□ -0.14
SIN3A-208ENST00000567289 SPATA31E1Q6ZUB1 1445 aa14.15□□□□□ -0.14
SIN3A-208ENST00000567289 GPATCH3Q96I76 525 aa14.15□□□□□ -0.14
SIN3A-208ENST00000567289 GAS2L2Q8NHY3 880 aa14.15□□□□□ -0.14
SIN3A-208ENST00000567289 NSD3Q9BZ95 1437 aa14.14□□□□□ -0.15
SIN3A-208ENST00000567289 HMGN5P82970 282 aaKnown RBP14.14□□□□□ -0.15
SIN3A-208ENST00000567289 TEX14Q8IWB6 1497 aa14.14□□□□□ -0.15
SIN3A-208ENST00000567289 STK3Q13188 491 aa14.14□□□□□ -0.15
SIN3A-208ENST00000567289 CABP1Q9NZU7 370 aa14.14□□□□□ -0.15
SIN3A-208ENST00000567289 CAMK4Q16566 473 aa14.13□□□□□ -0.15
SIN3A-208ENST00000567289 NUTM2GQ5VZR2 741 aa14.13□□□□□ -0.15
SIN3A-208ENST00000567289 PARD3Q8TEW0 1356 aa14.13□□□□□ -0.15
SIN3A-208ENST00000567289 TRERF1Q96PN7 1200 aa14.13□□□□□ -0.15
SIN3A-208ENST00000567289 C9orf78Q9NZ63 289 aaPredicted RBP14.13□□□□□ -0.15
SIN3A-208ENST00000567289 DTNBO60941 627 aa14.13□□□□□ -0.15
SIN3A-208ENST00000567289 PRIM1P49642 420 aaKnown RBP14.13□□□□□ -0.15
SIN3A-208ENST00000567289 KIF3AQ9Y496 699 aa14.13□□□□□ -0.15
SIN3A-208ENST00000567289 TROQ12816 1431 aaPredicted RBP14.13□□□□□ -0.15
SIN3A-208ENST00000567289 ERICH4A6NGS2 130 aa14.12□□□□□ -0.15
SIN3A-208ENST00000567289 TESK2Q96S53 571 aa14.12□□□□□ -0.15
SIN3A-208ENST00000567289 CWC22Q9HCG8 908 aaKnown RBP14.12□□□□□ -0.15
SIN3A-208ENST00000567289 GPRASP1Q5JY77 1395 aa14.12□□□□□ -0.15
SIN3A-208ENST00000567289 ZSCAN23Q3MJ62 389 aa14.12□□□□□ -0.15
SIN3A-208ENST00000567289 IFIT2P09913 472 aaKnown RBP14.12□□□□□ -0.15
SIN3A-208ENST00000567289 RRS1Q15050 365 aaKnown RBP14.12□□□□□ -0.15
SIN3A-208ENST00000567289 PRAM1Q96QH2 718 aa14.12□□□□□ -0.15
SIN3A-208ENST00000567289 SAMD9Q5K651 1589 aa14.11□□□□□ -0.15
SIN3A-208ENST00000567289 SKIDA1Q1XH10 827 aa14.11□□□□□ -0.15
SIN3A-208ENST00000567289 FILIP1Q7Z7B0 1213 aa14.11□□□□□ -0.15
SIN3A-208ENST00000567289 C16orf71Q8IYS4 520 aaPredicted RBP14.11□□□□□ -0.15
SIN3A-208ENST00000567289 PDCL2Q8N4E4 241 aa14.11□□□□□ -0.15
SIN3A-208ENST00000567289 SULT6B1Q6IMI4 303 aa14.1□□□□□ -0.15
SIN3A-208ENST00000567289 TPM4P67936 248 aa14.1□□□□□ -0.15
SIN3A-208ENST00000567289 KLHL40Q2TBA0 621 aa14.1□□□□□ -0.15
SIN3A-208ENST00000567289 NINLQ9Y2I6 1382 aa14.1□□□□□ -0.15
SIN3A-208ENST00000567289 TTC12Q9H892 705 aaPredicted RBP14.1□□□□□ -0.15
SIN3A-208ENST00000567289 F6X3S4 739 aa14.1□□□□□ -0.15
SIN3A-208ENST00000567289 IQGAP2Q13576 1575 aa14.1□□□□□ -0.15
SIN3A-208ENST00000567289 ZGPATQ8N5A5 531 aaKnown RBP14.1□□□□□ -0.15
SIN3A-208ENST00000567289 ADGRF5Q8IZF2 1346 aa14.09□□□□□ -0.15
SIN3A-208ENST00000567289 UBTFL1P0CB47 393 aaPredicted RBP14.09□□□□□ -0.15
SIN3A-208ENST00000567289 GCC2Q8IWJ2 1684 aa14.09□□□□□ -0.15
SIN3A-208ENST00000567289 SDF4Q9BRK5 362 aa14.09□□□□□ -0.15
SIN3A-208ENST00000567289 TOMM22Q9NS69 142 aa14.09□□□□□ -0.15
SIN3A-208ENST00000567289 PES1O00541 588 aaKnown RBP14.08□□□□□ -0.16
SIN3A-208ENST00000567289 HCLS1P14317 486 aaPredicted RBP14.08□□□□□ -0.16
SIN3A-208ENST00000567289 FAM177A1Q8N128 213 aaPredicted RBP14.08□□□□□ -0.16
SIN3A-208ENST00000567289 AIMP1Q12904 312 aaKnown RBP14.08□□□□□ -0.16
SIN3A-208ENST00000567289 CWC27Q6UX04 472 aaKnown RBP14.08□□□□□ -0.16
SIN3A-208ENST00000567289 RUFY2Q8WXA3 655 aa14.08□□□□□ -0.16
SIN3A-208ENST00000567289 TSC1Q92574 1164 aa14.08□□□□□ -0.16
SIN3A-208ENST00000567289 PPP4R3BQ5MIZ7 849 aa14.08□□□□□ -0.16
SIN3A-208ENST00000567289 CHAMP1Q96JM3 812 aa14.08□□□□□ -0.16
SIN3A-208ENST00000567289 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
SIN3A-208ENST00000567289 LRRIQ1Q96JM4 1722 aa14.07□□□□□ -0.16
SIN3A-208ENST00000567289 NUTM1Q86Y26 1132 aa14.07□□□□□ -0.16
SIN3A-208ENST00000567289 GAS2L3Q86XJ1 694 aa14.07□□□□□ -0.16
SIN3A-208ENST00000567289 C16orf45Q96MC5 204 aaPredicted RBP14.07□□□□□ -0.16
SIN3A-208ENST00000567289 BMP2KLQ5H9B9 411 aa14.07□□□□□ -0.16
SIN3A-208ENST00000567289 STK11IPQ8N1F8 1099 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms