RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 ADGRB1O14514 1584 aa16.72■□□□□ 0.27
SPG7-216ENST00000567138 ITSN1Q15811 1721 aa16.72■□□□□ 0.27
SPG7-216ENST00000567138 PHRF1Q9P1Y6 1649 aaKnown RBP16.72■□□□□ 0.27
SPG7-216ENST00000567138 TULP4Q9NRJ4 1543 aa16.71■□□□□ 0.27
SPG7-216ENST00000567138 EN1Q05925 392 aaPredicted RBP16.71■□□□□ 0.27
SPG7-216ENST00000567138 HIRIP3Q9BW71 556 aaPredicted RBP16.71■□□□□ 0.27
SPG7-216ENST00000567138 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
SPG7-216ENST00000567138 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
SPG7-216ENST00000567138 ARHGEF28Q8N1W1 1705 aaKnown RBP16.69■□□□□ 0.26
SPG7-216ENST00000567138 MINK1Q8N4C8 1332 aaPredicted RBP16.69■□□□□ 0.26
SPG7-216ENST00000567138 PRR36Q9H6K5 1346 aa16.69■□□□□ 0.26
SPG7-216ENST00000567138 SPATA31A5Q5VU36 1347 aa16.68■□□□□ 0.26
SPG7-216ENST00000567138 SPATA31A7Q8IWB4 1347 aa16.68■□□□□ 0.26
SPG7-216ENST00000567138 ACIN1Q9UKV3 1341 aaKnown RBP16.68■□□□□ 0.26
SPG7-216ENST00000567138 R3HDM1Q15032 1099 aaKnown RBP16.67■□□□□ 0.26
SPG7-216ENST00000567138 TRAK1Q9UPV9 953 aa16.67■□□□□ 0.26
SPG7-216ENST00000567138 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
SPG7-216ENST00000567138 RREB1Q92766 1687 aa16.66■□□□□ 0.26
SPG7-216ENST00000567138 EIF3AQ14152 1382 aaKnown RBP16.66■□□□□ 0.26
SPG7-216ENST00000567138 NUP188Q5SRE5 1749 aa16.65■□□□□ 0.26
SPG7-216ENST00000567138 PRDM11Q9NQV5 511 aa16.64■□□□□ 0.26
SPG7-216ENST00000567138 PAK3O75914 559 aaPredicted RBP16.64■□□□□ 0.25
SPG7-216ENST00000567138 EZH2Q15910 746 aaKnown RBP16.64■□□□□ 0.25
SPG7-216ENST00000567138 TOPAZ1Q8N9V7 1692 aa16.63■□□□□ 0.25
SPG7-216ENST00000567138 SLC24A1O60721 1099 aa16.63■□□□□ 0.25
SPG7-216ENST00000567138 NGDNQ8NEJ9 315 aaKnown RBP16.63■□□□□ 0.25
SPG7-216ENST00000567138 ATP7BP35670 1465 aa16.62■□□□□ 0.25
SPG7-216ENST00000567138 KIAA0232Q92628 1395 aa16.61■□□□□ 0.25
SPG7-216ENST00000567138 WASLO00401 505 aaPredicted RBP16.61■□□□□ 0.25
SPG7-216ENST00000567138 CHRNA2Q15822 529 aa16.61■□□□□ 0.25
SPG7-216ENST00000567138 SPATA31A1Q5TZJ5 1347 aa16.61■□□□□ 0.25
SPG7-216ENST00000567138 NRKQ7Z2Y5 1582 aa16.6■□□□□ 0.25
SPG7-216ENST00000567138 TRIM37O94972 964 aa16.6■□□□□ 0.25
SPG7-216ENST00000567138 STRN4Q9NRL3 753 aa16.6■□□□□ 0.25
SPG7-216ENST00000567138 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
SPG7-216ENST00000567138 CAMKK2Q96RR4 588 aa16.58■□□□□ 0.24
SPG7-216ENST00000567138 LMO7Q8WWI1 1683 aa16.57■□□□□ 0.24
SPG7-216ENST00000567138 NUTM2GQ5VZR2 741 aa16.57■□□□□ 0.24
SPG7-216ENST00000567138 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
SPG7-216ENST00000567138 FAM196AQ6ZSG2 479 aa16.56■□□□□ 0.24
SPG7-216ENST00000567138 USP35Q9P2H5 1018 aa16.56■□□□□ 0.24
SPG7-216ENST00000567138 RAB3GAP2Q9H2M9 1393 aa16.56■□□□□ 0.24
SPG7-216ENST00000567138 APBA3O96018 575 aa16.55■□□□□ 0.24
SPG7-216ENST00000567138 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
SPG7-216ENST00000567138 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
SPG7-216ENST00000567138 PARP4Q9UKK3 1724 aaKnown RBP16.55■□□□□ 0.24
SPG7-216ENST00000567138 CAMTA1Q9Y6Y1 1673 aa16.54■□□□□ 0.24
SPG7-216ENST00000567138 PARD3Q8TEW0 1356 aa16.54■□□□□ 0.24
SPG7-216ENST00000567138 NUDT16Q96DE0 195 aaKnown RBP16.54■□□□□ 0.24
SPG7-216ENST00000567138 SBF2Q86WG5 1849 aa16.54■□□□□ 0.24
SPG7-216ENST00000567138 WNK3Q9BYP7 1800 aa16.51■□□□□ 0.23
SPG7-216ENST00000567138 EVA1CP58658 441 aa16.51■□□□□ 0.23
SPG7-216ENST00000567138 PDE3BQ13370 1112 aa16.51■□□□□ 0.23
SPG7-216ENST00000567138 POLR3AO14802 1390 aaPredicted RBP16.5■□□□□ 0.23
SPG7-216ENST00000567138 RGPD3A6NKT7 1758 aaPredicted RBP16.5■□□□□ 0.23
SPG7-216ENST00000567138 RGPD4Q7Z3J3 1758 aa16.5■□□□□ 0.23
SPG7-216ENST00000567138 ACEP12821 1306 aa16.5■□□□□ 0.23
SPG7-216ENST00000567138 KIAA1210Q9ULL0 1709 aa16.5■□□□□ 0.23
SPG7-216ENST00000567138 LARP1Q6PKG0 1096 aaKnown RBP16.5■□□□□ 0.23
SPG7-216ENST00000567138 LRRC37A3O60309 1634 aa16.49■□□□□ 0.23
SPG7-216ENST00000567138 PEAK1Q9H792 1746 aa16.49■□□□□ 0.23
SPG7-216ENST00000567138 BARGINQ6ZT62 677 aa16.49■□□□□ 0.23
SPG7-216ENST00000567138 CDK19Q9BWU1 502 aa16.49■□□□□ 0.23
SPG7-216ENST00000567138 AKAP12Q02952 1782 aa16.47■□□□□ 0.23
SPG7-216ENST00000567138 TCP11L2Q8N4U5 519 aa16.47■□□□□ 0.23
SPG7-216ENST00000567138 CPDO75976 1380 aa16.47■□□□□ 0.23
SPG7-216ENST00000567138 COL5A2P05997 1499 aaPredicted RBP16.46■□□□□ 0.23
SPG7-216ENST00000567138 USP19O94966 1318 aa16.46■□□□□ 0.23
SPG7-216ENST00000567138 QRICH2Q9H0J4 1663 aa16.46■□□□□ 0.23
SPG7-216ENST00000567138 YY1P25490 414 aa16.46■□□□□ 0.23
SPG7-216ENST00000567138 NBPF8Q3BBV2 869 aa16.46■□□□□ 0.23
SPG7-216ENST00000567138 NBPF14Q5TI25 921 aa16.46■□□□□ 0.23
SPG7-216ENST00000567138 ABTB2Q8N961 1025 aa16.46■□□□□ 0.23
SPG7-216ENST00000567138 CASZ1Q86V15 1759 aa16.46■□□□□ 0.23
SPG7-216ENST00000567138 RGPD5Q99666 1765 aa16.45■□□□□ 0.22
SPG7-216ENST00000567138 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
SPG7-216ENST00000567138 PPP1R1BQ9UD71 204 aaPredicted RBP16.44■□□□□ 0.22
SPG7-216ENST00000567138 CCDC61Q9Y6R9 512 aa16.43■□□□□ 0.22
SPG7-216ENST00000567138 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
SPG7-216ENST00000567138 OVOS2A0A0J9YW53 1432 aa16.43■□□□□ 0.22
SPG7-216ENST00000567138 OVOS2Q6IE36 1432 aa16.43■□□□□ 0.22
SPG7-216ENST00000567138 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
SPG7-216ENST00000567138 PLEKHG3A1L390 1219 aa16.42■□□□□ 0.22
SPG7-216ENST00000567138 ZBTB7CA1YPR0 619 aa16.42■□□□□ 0.22
SPG7-216ENST00000567138 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
SPG7-216ENST00000567138 SPON1Q9HCB6 807 aa16.42■□□□□ 0.22
SPG7-216ENST00000567138 COL18A1P39060 1754 aa16.42■□□□□ 0.22
SPG7-216ENST00000567138 THRAP3Q9Y2W1 955 aaKnown RBP16.41■□□□□ 0.22
SPG7-216ENST00000567138 CRB1P82279 1406 aa16.41■□□□□ 0.22
SPG7-216ENST00000567138 PIK3C2AO00443 1686 aa16.41■□□□□ 0.22
SPG7-216ENST00000567138 MYOM1P52179 1685 aa16.41■□□□□ 0.22
SPG7-216ENST00000567138 SLIT3O75094 1523 aa16.4■□□□□ 0.22
SPG7-216ENST00000567138 KCNQ2O43526 872 aa16.4■□□□□ 0.22
SPG7-216ENST00000567138 GCP02774 474 aa16.4■□□□□ 0.22
SPG7-216ENST00000567138 NINLQ9Y2I6 1382 aa16.4■□□□□ 0.22
SPG7-216ENST00000567138 NLRP13Q86W25 1043 aa16.39■□□□□ 0.21
SPG7-216ENST00000567138 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
SPG7-216ENST00000567138 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
SPG7-216ENST00000567138 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
SPG7-216ENST00000567138 CABP2Q9NPB3 220 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms