RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 BRWD3Q6RI45 1802 aa23.44■■□□□ 1.34
CLN6-208ENST00000567060 TESK2Q96S53 571 aa23.42■■□□□ 1.34
CLN6-208ENST00000567060 HIRIP3Q9BW71 556 aaPredicted RBP23.42■■□□□ 1.34
CLN6-208ENST00000567060 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
CLN6-208ENST00000567060 CDK19Q9BWU1 502 aa23.41■■□□□ 1.34
CLN6-208ENST00000567060 PHF8Q9UPP1 1060 aa23.41■■□□□ 1.34
CLN6-208ENST00000567060 CDCA8Q53HL2 280 aa23.4■■□□□ 1.34
CLN6-208ENST00000567060 ITSN1Q15811 1721 aa23.39■■□□□ 1.33
CLN6-208ENST00000567060 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
CLN6-208ENST00000567060 FAM83GA6ND36 823 aa23.38■■□□□ 1.33
CLN6-208ENST00000567060 PLEKHG5O94827 1062 aa23.38■■□□□ 1.33
CLN6-208ENST00000567060 TMF1P82094 1093 aa23.38■■□□□ 1.33
CLN6-208ENST00000567060 PSME1Q06323 249 aa23.38■■□□□ 1.33
CLN6-208ENST00000567060 TNS3Q68CZ2 1445 aa23.37■■□□□ 1.33
CLN6-208ENST00000567060 RGPD8O14715 1765 aaPredicted RBP23.37■■□□□ 1.33
CLN6-208ENST00000567060 ATP7BP35670 1465 aa23.36■■□□□ 1.33
CLN6-208ENST00000567060 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
CLN6-208ENST00000567060 HAP1P54257 671 aaPredicted RBP23.36■■□□□ 1.33
CLN6-208ENST00000567060 SRPK2P78362 688 aaKnown RBP23.36■■□□□ 1.33
CLN6-208ENST00000567060 SF3B2Q13435 895 aaKnown RBP23.36■■□□□ 1.33
CLN6-208ENST00000567060 KRT27Q7Z3Y8 459 aa23.36■■□□□ 1.33
CLN6-208ENST00000567060 CCDC61Q9Y6R9 512 aa23.36■■□□□ 1.33
CLN6-208ENST00000567060 SBNO1A3KN83 1393 aa23.35■■□□□ 1.33
CLN6-208ENST00000567060 NUDT16Q96DE0 195 aaKnown RBP23.34■■□□□ 1.33
CLN6-208ENST00000567060 CCDC9Q9Y3X0 531 aaKnown RBP23.34■■□□□ 1.33
CLN6-208ENST00000567060 TOPAZ1Q8N9V7 1692 aa23.32■■□□□ 1.32
CLN6-208ENST00000567060 NINLQ9Y2I6 1382 aa23.32■■□□□ 1.32
CLN6-208ENST00000567060 LMOD2Q6P5Q4 547 aa23.32■■□□□ 1.32
CLN6-208ENST00000567060 PRR36Q9H6K5 1346 aa23.32■■□□□ 1.32
CLN6-208ENST00000567060 NWD2Q9ULI1 1742 aa23.31■■□□□ 1.32
CLN6-208ENST00000567060 PLCH1Q4KWH8 1693 aa23.3■■□□□ 1.32
CLN6-208ENST00000567060 PMFBP1Q8TBY8 1022 aa23.3■■□□□ 1.32
CLN6-208ENST00000567060 CABP2Q9NPB3 220 aa23.3■■□□□ 1.32
CLN6-208ENST00000567060 ARHGEF10O15013 1369 aa23.29■■□□□ 1.32
CLN6-208ENST00000567060 PLEKHG3A1L390 1219 aa23.29■■□□□ 1.32
CLN6-208ENST00000567060 PSDA5PKW4 1024 aaPredicted RBP23.28■■□□□ 1.32
CLN6-208ENST00000567060 FAM98CQ17RN3 349 aaKnown RBP23.27■■□□□ 1.32
CLN6-208ENST00000567060 ABCA3Q99758 1704 aa23.27■■□□□ 1.32
CLN6-208ENST00000567060 BTG4Q9NY30 223 aa23.26■■□□□ 1.31
CLN6-208ENST00000567060 POLR3AO14802 1390 aaPredicted RBP23.26■■□□□ 1.31
CLN6-208ENST00000567060 LRP5O75197 1615 aa23.26■■□□□ 1.31
CLN6-208ENST00000567060 PPIP5K1Q6PFW1 1433 aa23.25■■□□□ 1.31
CLN6-208ENST00000567060 BRD4O60885 1362 aaPredicted RBP23.25■■□□□ 1.31
CLN6-208ENST00000567060 BAG6P46379 1132 aa23.24■■□□□ 1.31
CLN6-208ENST00000567060 FAM182BQ5T319 152 aa23.23■■□□□ 1.31
CLN6-208ENST00000567060 A0A0G2JS52 829 aa23.22■■□□□ 1.31
CLN6-208ENST00000567060 MYT1Q01538 1121 aa23.22■■□□□ 1.31
CLN6-208ENST00000567060 EN1Q05925 392 aaPredicted RBP23.22■■□□□ 1.31
CLN6-208ENST00000567060 ZNF692Q9BU19 519 aaPredicted RBP23.22■■□□□ 1.31
CLN6-208ENST00000567060 NGDNQ8NEJ9 315 aaKnown RBP23.21■■□□□ 1.31
CLN6-208ENST00000567060 NRAPQ86VF7 1730 aa23.21■■□□□ 1.31
CLN6-208ENST00000567060 CABP1Q9NZU7 370 aa23.2■■□□□ 1.3
CLN6-208ENST00000567060 SPATA31A5Q5VU36 1347 aa23.19■■□□□ 1.3
CLN6-208ENST00000567060 SPATA31A7Q8IWB4 1347 aa23.19■■□□□ 1.3
CLN6-208ENST00000567060 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
CLN6-208ENST00000567060 ACEP12821 1306 aa23.18■■□□□ 1.3
CLN6-208ENST00000567060 TERF2IPQ9NYB0 399 aa23.18■■□□□ 1.3
CLN6-208ENST00000567060 CPSF1Q10570 1443 aaKnown RBP23.16■■□□□ 1.3
CLN6-208ENST00000567060 ALS2Q96Q42 1657 aa23.16■■□□□ 1.3
CLN6-208ENST00000567060 AKAP12Q02952 1782 aa23.15■■□□□ 1.3
CLN6-208ENST00000567060 HDGFL2Q7Z4V5 671 aaPredicted RBP23.15■■□□□ 1.3
CLN6-208ENST00000567060 TMC1Q8TDI8 760 aa23.15■■□□□ 1.3
CLN6-208ENST00000567060 COL14A1Q05707 1796 aaKnown RBP23.14■■□□□ 1.3
CLN6-208ENST00000567060 R3HDM1Q15032 1099 aaKnown RBP23.14■■□□□ 1.29
CLN6-208ENST00000567060 ANKRD36BQ8N2N9 1353 aa23.14■■□□□ 1.29
CLN6-208ENST00000567060 SLC12A5Q9H2X9 1139 aa23.13■■□□□ 1.29
CLN6-208ENST00000567060 USP6P35125 1406 aa23.13■■□□□ 1.29
CLN6-208ENST00000567060 EZH2Q15910 746 aaKnown RBP23.12■■□□□ 1.29
CLN6-208ENST00000567060 KIF7Q2M1P5 1343 aa23.11■■□□□ 1.29
CLN6-208ENST00000567060 MON2Q7Z3U7 1717 aa23.11■■□□□ 1.29
CLN6-208ENST00000567060 DISP2A7MBM2 1401 aa23.11■■□□□ 1.29
CLN6-208ENST00000567060 MYOM1P52179 1685 aa23.11■■□□□ 1.29
CLN6-208ENST00000567060 CD163L1Q9NR16 1453 aa23.11■■□□□ 1.29
CLN6-208ENST00000567060 CCDC7Q96M83 1385 aa23.1■■□□□ 1.29
CLN6-208ENST00000567060 THSD7AQ9UPZ6 1657 aa23.09■■□□□ 1.29
CLN6-208ENST00000567060 RGPD1P0DJD0 1748 aa23.09■■□□□ 1.29
CLN6-208ENST00000567060 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
CLN6-208ENST00000567060 CAMKK2Q96RR4 588 aa23.09■■□□□ 1.29
CLN6-208ENST00000567060 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
CLN6-208ENST00000567060 KTN1Q86UP2 1357 aaKnown RBP23.09■■□□□ 1.29
CLN6-208ENST00000567060 SPATA31A1Q5TZJ5 1347 aa23.08■■□□□ 1.29
CLN6-208ENST00000567060 TTC21AQ8NDW8 1320 aa23.08■■□□□ 1.29
CLN6-208ENST00000567060 EDC4Q6P2E9 1401 aaKnown RBP23.08■■□□□ 1.29
CLN6-208ENST00000567060 SSH2Q76I76 1423 aa23.08■■□□□ 1.29
CLN6-208ENST00000567060 C11orf95C9JLR9 678 aaPredicted RBP23.08■■□□□ 1.29
CLN6-208ENST00000567060 A0A1W2PP64 1363 aa23.08■■□□□ 1.29
CLN6-208ENST00000567060 CRYBG1Q9Y4K1 1723 aa23.08■■□□□ 1.28
CLN6-208ENST00000567060 TRIM37O94972 964 aa23.06■■□□□ 1.28
CLN6-208ENST00000567060 CHRNA2Q15822 529 aa23.06■■□□□ 1.28
CLN6-208ENST00000567060 NRKQ7Z2Y5 1582 aa23.06■■□□□ 1.28
CLN6-208ENST00000567060 TNS1Q9HBL0 1735 aaKnown RBP23.05■■□□□ 1.28
CLN6-208ENST00000567060 KIAA0232Q92628 1395 aa23.05■■□□□ 1.28
CLN6-208ENST00000567060 WASHC2AQ641Q2 1341 aa23.05■■□□□ 1.28
CLN6-208ENST00000567060 FAM196AQ6ZSG2 479 aa23.04■■□□□ 1.28
CLN6-208ENST00000567060 POLR3GLQ9BT43 218 aa23.03■■□□□ 1.28
CLN6-208ENST00000567060 TTC21BQ7Z4L5 1316 aa23.03■■□□□ 1.28
CLN6-208ENST00000567060 ZC3H6P61129 1189 aaKnown RBP23.02■■□□□ 1.28
CLN6-208ENST00000567060 STRN4Q9NRL3 753 aa23.02■■□□□ 1.28
CLN6-208ENST00000567060 APBA3O96018 575 aa23.01■■□□□ 1.27
CLN6-208ENST00000567060 NUTM2GQ5VZR2 741 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms