RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 USP32Q8NFA0 1604 aa31.09■■■□□ 2.57
FANCA-221ENST00000566889 MYOM2P54296 1465 aa31.08■■■□□ 2.57
FANCA-221ENST00000566889 CHD1LQ86WJ1 897 aa31.08■■■□□ 2.57
FANCA-221ENST00000566889 FAM13BQ9NYF5 915 aa31.08■■■□□ 2.57
FANCA-221ENST00000566889 SMAP1Q8IYB5 467 aaPredicted RBP31.07■■■□□ 2.56
FANCA-221ENST00000566889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.06■■■□□ 2.565e-7■■■□□ 18.8
FANCA-221ENST00000566889 DYNC1I1O14576 645 aa31.06■■■□□ 2.56
FANCA-221ENST00000566889 MAP3K4Q9Y6R4 1608 aa31.06■■■□□ 2.56
FANCA-221ENST00000566889 CD2BP2O95400 341 aaKnown RBP31.05■■■□□ 2.56
FANCA-221ENST00000566889 SSH1Q8WYL5 1049 aa31.04■■■□□ 2.56
FANCA-221ENST00000566889 ABCA6Q8N139 1617 aa31.03■■■□□ 2.56
FANCA-221ENST00000566889 UQCRHLA0A096LP55 91 aa31.03■■■□□ 2.56
FANCA-221ENST00000566889 UQCRHP07919 91 aa31.03■■■□□ 2.56
FANCA-221ENST00000566889 GAS2L2Q8NHY3 880 aa31.03■■■□□ 2.56
FANCA-221ENST00000566889 LNPKQ9C0E8 428 aa31.03■■■□□ 2.56
FANCA-221ENST00000566889 MTHFSP49914 203 aa31.02■■■□□ 2.56
FANCA-221ENST00000566889 NUCB2P80303 420 aa31.02■■■□□ 2.56
FANCA-221ENST00000566889 FOXD4L1Q9NU39 408 aa31.02■■■□□ 2.56
FANCA-221ENST00000566889 DNAJC5BQ9UF47 199 aa31.02■■■□□ 2.56
FANCA-221ENST00000566889 ABCC11Q96J66 1382 aa31.02■■■□□ 2.56
FANCA-221ENST00000566889 IPO8O15397 1037 aaKnown RBP31.02■■■□□ 2.56
FANCA-221ENST00000566889 EXOSC9Q06265 439 aaKnown RBP31.01■■■□□ 2.56
FANCA-221ENST00000566889 TMEM57Q8N5G2 664 aa31.01■■■□□ 2.56
FANCA-221ENST00000566889 NOS1P29475 1434 aa31.01■■■□□ 2.55
FANCA-221ENST00000566889 ZSCAN23Q3MJ62 389 aa31.01■■■□□ 2.55
FANCA-221ENST00000566889 PODXL2Q9NZ53 605 aa31.01■■■□□ 2.55
FANCA-221ENST00000566889 ZKSCAN5Q9Y2L8 839 aa31.01■■■□□ 2.55
FANCA-221ENST00000566889 REREQ9P2R6 1566 aa31.01■■■□□ 2.55
FANCA-221ENST00000566889 CFAP70Q5T0N1 1121 aa31■■■□□ 2.55
FANCA-221ENST00000566889 FBLN2P98095 1184 aa31■■■□□ 2.55
FANCA-221ENST00000566889 NOB1Q9ULX3 412 aaKnown RBP31■■■□□ 2.55
FANCA-221ENST00000566889 TNNT2P45379 298 aaPredicted RBP30.99■■■□□ 2.55
FANCA-221ENST00000566889 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.99■■■□□ 2.55
FANCA-221ENST00000566889 IL16Q14005 1332 aa30.98■■■□□ 2.55
FANCA-221ENST00000566889 TET3O43151 1660 aa30.98■■■□□ 2.55
FANCA-221ENST00000566889 TSR2Q969E8 191 aaKnown RBP30.97■■■□□ 2.55
FANCA-221ENST00000566889 GCC1Q96CN9 775 aa30.97■■■□□ 2.55
FANCA-221ENST00000566889 TBC1D9Q6ZT07 1266 aa30.96■■■□□ 2.55
FANCA-221ENST00000566889 U2AF1L5P0DN76 240 aaPredicted RBP30.95■■■□□ 2.55
FANCA-221ENST00000566889 U2AF1Q01081 240 aaKnown RBP eCLIP30.95■■■□□ 2.554e-8■■■□□ 18.2
FANCA-221ENST00000566889 CAVIN1Q6NZI2 390 aaKnown RBP30.95■■■□□ 2.55
FANCA-221ENST00000566889 RBSNQ9H1K0 784 aa30.95■■■□□ 2.55
FANCA-221ENST00000566889 LMBRD1Q9NUN5 540 aa30.95■■■□□ 2.55
FANCA-221ENST00000566889 XPCQ01831 940 aaPredicted RBP30.94■■■□□ 2.54
FANCA-221ENST00000566889 SASS6Q6UVJ0 657 aa30.94■■■□□ 2.54
FANCA-221ENST00000566889 CFAP44Q96MT7 982 aa30.94■■■□□ 2.54
FANCA-221ENST00000566889 MCTP1Q6DN14 999 aa30.94■■■□□ 2.54
FANCA-221ENST00000566889 CHMP4BQ9H444 224 aaKnown RBP30.94■■■□□ 2.54
FANCA-221ENST00000566889 CYP2E1P05181 493 aaPredicted RBP30.93■■■□□ 2.54
FANCA-221ENST00000566889 RABEP1Q15276 862 aa30.93■■■□□ 2.54
FANCA-221ENST00000566889 CCDC39Q9UFE4 941 aa30.93■■■□□ 2.54
FANCA-221ENST00000566889 NSD2O96028 1365 aa30.93■■■□□ 2.54
FANCA-221ENST00000566889 DEPDC5O75140 1603 aa30.92■■■□□ 2.54
FANCA-221ENST00000566889 RBM42Q9BTD8 480 aaKnown RBP30.92■■■□□ 2.54
FANCA-221ENST00000566889 NCLP19338 710 aaKnown RBP30.9■■■□□ 2.54
FANCA-221ENST00000566889 ALDH1L2Q3SY69 923 aa30.9■■■□□ 2.54
FANCA-221ENST00000566889 CWC22Q9HCG8 908 aaKnown RBP30.89■■■□□ 2.54
FANCA-221ENST00000566889 SETBP1Q9Y6X0 1596 aa30.89■■■□□ 2.53
FANCA-221ENST00000566889 MED14O60244 1454 aa30.88■■■□□ 2.53
FANCA-221ENST00000566889 CDC45O75419 566 aa30.88■■■□□ 2.53
FANCA-221ENST00000566889 INO80Q9ULG1 1556 aaPredicted RBP30.88■■■□□ 2.53
FANCA-221ENST00000566889 NRXN1Q9ULB1 1477 aa30.88■■■□□ 2.53
FANCA-221ENST00000566889 PRIM1P49642 420 aaKnown RBP30.88■■■□□ 2.53
FANCA-221ENST00000566889 ANKRD45Q5TZF3 282 aa30.88■■■□□ 2.53
FANCA-221ENST00000566889 SLC12A5Q9H2X9 1139 aa30.87■■■□□ 2.53
FANCA-221ENST00000566889 ADGRF5Q8IZF2 1346 aa30.87■■■□□ 2.53
FANCA-221ENST00000566889 IFT172Q9UG01 1749 aa30.86■■■□□ 2.53
FANCA-221ENST00000566889 TMPOP42166 694 aaKnown RBP30.86■■■□□ 2.53
FANCA-221ENST00000566889 ZC3H13Q5T200 1668 aaKnown RBP30.86■■■□□ 2.53
FANCA-221ENST00000566889 CD109Q6YHK3 1445 aa30.85■■■□□ 2.53
FANCA-221ENST00000566889 TRAPPC8Q9Y2L5 1435 aa30.85■■■□□ 2.53
FANCA-221ENST00000566889 TRIM35Q9UPQ4 493 aa30.85■■■□□ 2.53
FANCA-221ENST00000566889 ABCC1P33527 1531 aa30.84■■■□□ 2.53
FANCA-221ENST00000566889 UTP14CQ5TAP6 766 aaKnown RBP30.84■■■□□ 2.53
FANCA-221ENST00000566889 LRSAM1Q6UWE0 723 aa30.84■■■□□ 2.53
FANCA-221ENST00000566889 BRPF1P55201 1214 aaPredicted RBP30.83■■■□□ 2.53
FANCA-221ENST00000566889 PLEKHF1Q96S99 279 aa30.83■■■□□ 2.53
FANCA-221ENST00000566889 PLCH2O75038 1416 aa30.83■■■□□ 2.53
FANCA-221ENST00000566889 PPIP5K1Q6PFW1 1433 aa30.82■■■□□ 2.53
FANCA-221ENST00000566889 CCDC94Q9BW85 323 aaPredicted RBP30.82■■■□□ 2.52
FANCA-221ENST00000566889 VWDEQ8N2E2 1590 aa30.82■■■□□ 2.52
FANCA-221ENST00000566889 ZNF428Q96B54 188 aa30.82■■■□□ 2.52
FANCA-221ENST00000566889 PPRC1Q5VV67 1664 aaKnown RBP30.82■■■□□ 2.52
FANCA-221ENST00000566889 EFCAB2Q5VUJ9 269 aa30.81■■■□□ 2.52
FANCA-221ENST00000566889 KIF1BO60333 1816 aa30.8■■■□□ 2.52
FANCA-221ENST00000566889 QRICH2Q9H0J4 1663 aa30.79■■■□□ 2.52
FANCA-221ENST00000566889 PUS7Q96PZ0 661 aaKnown RBP30.79■■■□□ 2.52
FANCA-221ENST00000566889 ZBTB7BO15156 539 aaPredicted RBP30.77■■■□□ 2.52
FANCA-221ENST00000566889 GPT2Q8TD30 523 aa30.77■■■□□ 2.52
FANCA-221ENST00000566889 AK9Q5TCS8 1911 aa30.77■■■□□ 2.52
FANCA-221ENST00000566889 PRPF40AO75400 957 aaKnown RBP30.76■■■□□ 2.51
FANCA-221ENST00000566889 PIK3R4Q99570 1358 aa30.75■■■□□ 2.51
FANCA-221ENST00000566889 DMTNQ08495 405 aa30.75■■■□□ 2.51
FANCA-221ENST00000566889 SPAG9O60271 1321 aaKnown RBP30.75■■■□□ 2.51
FANCA-221ENST00000566889 ANKRD36BQ8N2N9 1353 aa30.74■■■□□ 2.51
FANCA-221ENST00000566889 MBD3O95983 291 aa30.73■■■□□ 2.51
FANCA-221ENST00000566889 MYRIPQ8NFW9 859 aa30.73■■■□□ 2.51
FANCA-221ENST00000566889 ARHGAP45Q92619 1136 aa30.73■■■□□ 2.51
FANCA-221ENST00000566889 ZFYVE16Q7Z3T8 1539 aa30.73■■■□□ 2.51
FANCA-221ENST00000566889 KIAA2012Q0VF49 1180 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms