RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 UPF1Q92900 1129 aaKnown RBP eCLIP26.86■■□□□ 1.89
IFT140-208ENST00000566818 TONSLQ96HA7 1378 aa26.84■■□□□ 1.89
IFT140-208ENST00000566818 GJD4Q96KN9 370 aaPredicted RBP26.84■■□□□ 1.89
IFT140-208ENST00000566818 ACEP12821 1306 aa26.83■■□□□ 1.89
IFT140-208ENST00000566818 CRYBG1Q9Y4K1 1723 aa26.82■■□□□ 1.88
IFT140-208ENST00000566818 PLEKHG3A1L390 1219 aa26.82■■□□□ 1.88
IFT140-208ENST00000566818 ATAD2Q6PL18 1390 aa26.82■■□□□ 1.88
IFT140-208ENST00000566818 PPIP5K1Q6PFW1 1433 aa26.82■■□□□ 1.88
IFT140-208ENST00000566818 RALGAPBQ86X10 1494 aa26.81■■□□□ 1.88
IFT140-208ENST00000566818 COL14A1Q05707 1796 aaKnown RBP26.8■■□□□ 1.88
IFT140-208ENST00000566818 EVC2Q86UK5 1308 aa26.79■■□□□ 1.88
IFT140-208ENST00000566818 GLI3P10071 1580 aa26.79■■□□□ 1.88
IFT140-208ENST00000566818 NBPF8Q3BBV2 869 aa26.78■■□□□ 1.88
IFT140-208ENST00000566818 CABP2Q9NPB3 220 aa26.78■■□□□ 1.88
IFT140-208ENST00000566818 PHRF1Q9P1Y6 1649 aaKnown RBP26.77■■□□□ 1.88
IFT140-208ENST00000566818 VPS72Q15906 364 aa26.77■■□□□ 1.88
IFT140-208ENST00000566818 FAM83GA6ND36 823 aa26.76■■□□□ 1.87
IFT140-208ENST00000566818 NRAPQ86VF7 1730 aa26.75■■□□□ 1.87
IFT140-208ENST00000566818 BRD4O60885 1362 aaPredicted RBP26.74■■□□□ 1.87
IFT140-208ENST00000566818 CCDC9Q9Y3X0 531 aaKnown RBP26.74■■□□□ 1.87
IFT140-208ENST00000566818 PRDM11Q9NQV5 511 aa26.72■■□□□ 1.87
IFT140-208ENST00000566818 CARD11Q9BXL7 1154 aa26.71■■□□□ 1.87
IFT140-208ENST00000566818 BTG4Q9NY30 223 aa26.71■■□□□ 1.87
IFT140-208ENST00000566818 ABTB2Q8N961 1025 aa26.69■■□□□ 1.86
IFT140-208ENST00000566818 SBNO2Q9Y2G9 1366 aa26.69■■□□□ 1.86
IFT140-208ENST00000566818 NRKQ7Z2Y5 1582 aa26.68■■□□□ 1.86
IFT140-208ENST00000566818 USP6P35125 1406 aa26.68■■□□□ 1.86
IFT140-208ENST00000566818 NUTM2GQ5VZR2 741 aa26.68■■□□□ 1.86
IFT140-208ENST00000566818 CABP1Q9NZU7 370 aa26.68■■□□□ 1.86
IFT140-208ENST00000566818 KIAA0232Q92628 1395 aa26.68■■□□□ 1.86
IFT140-208ENST00000566818 USP19O94966 1318 aa26.65■■□□□ 1.86
IFT140-208ENST00000566818 NLRP13Q86W25 1043 aa26.64■■□□□ 1.86
IFT140-208ENST00000566818 SEPT12Q8IYM1 358 aa26.63■■□□□ 1.85
IFT140-208ENST00000566818 BRWD3Q6RI45 1802 aa26.61■■□□□ 1.85
IFT140-208ENST00000566818 A0A0G2JS52 829 aa26.61■■□□□ 1.85
IFT140-208ENST00000566818 ZC3H6P61129 1189 aaKnown RBP26.61■■□□□ 1.85
IFT140-208ENST00000566818 MYT1Q01538 1121 aa26.61■■□□□ 1.85
IFT140-208ENST00000566818 CPDO75976 1380 aa26.6■■□□□ 1.85
IFT140-208ENST00000566818 ONECUT3O60422 494 aaPredicted RBP26.6■■□□□ 1.85
IFT140-208ENST00000566818 AKAP12Q02952 1782 aa26.59■■□□□ 1.85
IFT140-208ENST00000566818 CHRNA2Q15822 529 aa26.59■■□□□ 1.85
IFT140-208ENST00000566818 CCDC125Q86Z20 511 aa26.59■■□□□ 1.85
IFT140-208ENST00000566818 SPATA31A5Q5VU36 1347 aa26.59■■□□□ 1.85
IFT140-208ENST00000566818 SPATA31A7Q8IWB4 1347 aa26.59■■□□□ 1.85
IFT140-208ENST00000566818 ZNF692Q9BU19 519 aaPredicted RBP26.58■■□□□ 1.85
IFT140-208ENST00000566818 FAM98CQ17RN3 349 aaKnown RBP26.57■■□□□ 1.84
IFT140-208ENST00000566818 PIK3C2AO00443 1686 aa26.57■■□□□ 1.84
IFT140-208ENST00000566818 SSH2Q76I76 1423 aa26.56■■□□□ 1.84
IFT140-208ENST00000566818 EP400Q96L91 3159 aa26.56■■□□□ 1.84
IFT140-208ENST00000566818 SLIT3O75094 1523 aa26.55■■□□□ 1.84
IFT140-208ENST00000566818 GCP02774 474 aa26.55■■□□□ 1.84
IFT140-208ENST00000566818 NLRP6P59044 892 aa26.55■■□□□ 1.84
IFT140-208ENST00000566818 KRT27Q7Z3Y8 459 aa26.55■■□□□ 1.84
IFT140-208ENST00000566818 STRN4Q9NRL3 753 aa26.55■■□□□ 1.84
IFT140-208ENST00000566818 LMO7Q8WWI1 1683 aa26.54■■□□□ 1.84
IFT140-208ENST00000566818 TTC21AQ8NDW8 1320 aa26.53■■□□□ 1.84
IFT140-208ENST00000566818 KTN1Q86UP2 1357 aaKnown RBP26.53■■□□□ 1.84
IFT140-208ENST00000566818 BLMP54132 1417 aaPredicted RBP26.53■■□□□ 1.84
IFT140-208ENST00000566818 CPSF1Q10570 1443 aaKnown RBP26.53■■□□□ 1.84
IFT140-208ENST00000566818 MON2Q7Z3U7 1717 aa26.52■■□□□ 1.84
IFT140-208ENST00000566818 THSD7AQ9UPZ6 1657 aa26.52■■□□□ 1.84
IFT140-208ENST00000566818 SPATA31A1Q5TZJ5 1347 aa26.51■■□□□ 1.83
IFT140-208ENST00000566818 TTC21BQ7Z4L5 1316 aa26.51■■□□□ 1.83
IFT140-208ENST00000566818 EVA1CP58658 441 aa26.51■■□□□ 1.83
IFT140-208ENST00000566818 CAMTA1Q9Y6Y1 1673 aa26.5■■□□□ 1.83
IFT140-208ENST00000566818 CLSPNQ9HAW4 1339 aa26.48■■□□□ 1.83
IFT140-208ENST00000566818 SLC24A1O60721 1099 aa26.48■■□□□ 1.83
IFT140-208ENST00000566818 SF3B2Q13435 895 aaKnown RBP26.48■■□□□ 1.83
IFT140-208ENST00000566818 ZBTB7CA1YPR0 619 aa26.46■■□□□ 1.83
IFT140-208ENST00000566818 TMC1Q8TDI8 760 aa26.46■■□□□ 1.83
IFT140-208ENST00000566818 PUS7Q96PZ0 661 aaKnown RBP26.46■■□□□ 1.83
IFT140-208ENST00000566818 COL5A2P05997 1499 aaPredicted RBP26.45■■□□□ 1.82
IFT140-208ENST00000566818 HDGFL2Q7Z4V5 671 aaPredicted RBP26.45■■□□□ 1.82
IFT140-208ENST00000566818 KCNH5Q8NCM2 988 aa26.45■■□□□ 1.82
IFT140-208ENST00000566818 AATKQ6ZMQ8 1374 aa26.45■■□□□ 1.82
IFT140-208ENST00000566818 PCGF6Q9BYE7 350 aa26.44■■□□□ 1.82
IFT140-208ENST00000566818 CD163L1Q9NR16 1453 aa26.43■■□□□ 1.82
IFT140-208ENST00000566818 ST20-MTHFSA0A0A6YYL1 179 aa26.43■■□□□ 1.82
IFT140-208ENST00000566818 TIMELESSQ9UNS1 1208 aa26.43■■□□□ 1.82
IFT140-208ENST00000566818 NINLQ9Y2I6 1382 aa26.43■■□□□ 1.82
IFT140-208ENST00000566818 LARP1Q6PKG0 1096 aaKnown RBP26.42■■□□□ 1.82
IFT140-208ENST00000566818 TERF2IPQ9NYB0 399 aa26.42■■□□□ 1.82
IFT140-208ENST00000566818 USP35Q9P2H5 1018 aa26.42■■□□□ 1.82
IFT140-208ENST00000566818 BARGINQ6ZT62 677 aa26.41■■□□□ 1.82
IFT140-208ENST00000566818 TESK2Q96S53 571 aa26.41■■□□□ 1.82
IFT140-208ENST00000566818 USP47Q96K76 1375 aa26.41■■□□□ 1.82
IFT140-208ENST00000566818 EDC4Q6P2E9 1401 aaKnown RBP26.4■■□□□ 1.82
IFT140-208ENST00000566818 TCP11L2Q8N4U5 519 aa26.4■■□□□ 1.82
IFT140-208ENST00000566818 THRAP3Q9Y2W1 955 aaKnown RBP26.4■■□□□ 1.82
IFT140-208ENST00000566818 USP54Q70EL1 1684 aa26.4■■□□□ 1.82
IFT140-208ENST00000566818 CRB1P82279 1406 aa26.39■■□□□ 1.82
IFT140-208ENST00000566818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.39■■□□□ 1.82
IFT140-208ENST00000566818 NFAT5O94916 1531 aa26.39■■□□□ 1.81
IFT140-208ENST00000566818 USP31Q70CQ4 1352 aa26.38■■□□□ 1.81
IFT140-208ENST00000566818 SLC12A5Q9H2X9 1139 aa26.38■■□□□ 1.81
IFT140-208ENST00000566818 RGPD1P0DJD0 1748 aa26.38■■□□□ 1.81
IFT140-208ENST00000566818 A0A1W2PP64 1363 aa26.37■■□□□ 1.81
IFT140-208ENST00000566818 SOX12O15370 315 aa26.37■■□□□ 1.81
IFT140-208ENST00000566818 ABCC6O95255 1503 aa26.37■■□□□ 1.81
IFT140-208ENST00000566818 COL18A1P39060 1754 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms