RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 CAMSAP1Q5T5Y3 1602 aa18.05■□□□□ 0.48
CDH1-209ENST00000566510 FYB1O15117 783 aa18.05■□□□□ 0.48
CDH1-209ENST00000566510 ATF7IPQ6VMQ6 1270 aa18.05■□□□□ 0.48
CDH1-209ENST00000566510 DDX19BQ9UMR2 479 aa18.05■□□□□ 0.48
CDH1-209ENST00000566510 CT47B1P0C2W7 299 aaPredicted RBP18.05■□□□□ 0.48
CDH1-209ENST00000566510 ABCC11Q96J66 1382 aa18.04■□□□□ 0.48
CDH1-209ENST00000566510 NEXMIFQ5QGS0 1516 aa18.04■□□□□ 0.48
CDH1-209ENST00000566510 DIAPH1O60610 1272 aaKnown RBP18.03■□□□□ 0.48
CDH1-209ENST00000566510 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
CDH1-209ENST00000566510 TMEM57Q8N5G2 664 aa18.03■□□□□ 0.48
CDH1-209ENST00000566510 ARXQ96QS3 562 aa18.02■□□□□ 0.48
CDH1-209ENST00000566510 C22orf23Q9BZE7 217 aa18.02■□□□□ 0.48
CDH1-209ENST00000566510 CFAP74Q9C0B2 1584 aa18.02■□□□□ 0.48
CDH1-209ENST00000566510 ANTXR1Q9H6X2 564 aa18.02■□□□□ 0.47
CDH1-209ENST00000566510 ADGRB2O60241 1585 aa18.02■□□□□ 0.47
CDH1-209ENST00000566510 HDGFL2Q7Z4V5 671 aaPredicted RBP18.01■□□□□ 0.47
CDH1-209ENST00000566510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDH1-209ENST00000566510 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.01■□□□□ 0.47
CDH1-209ENST00000566510 FBLN1P23142 703 aa18■□□□□ 0.47
CDH1-209ENST00000566510 ZMYM3Q14202 1370 aa18■□□□□ 0.47
CDH1-209ENST00000566510 HDAC1Q13547 482 aaPredicted RBP17.99■□□□□ 0.47
CDH1-209ENST00000566510 CABP1Q9NZU7 370 aa17.99■□□□□ 0.47
CDH1-209ENST00000566510 STAG3Q9UJ98 1225 aa17.99■□□□□ 0.47
CDH1-209ENST00000566510 SLC52A1Q9NWF4 448 aa17.99■□□□□ 0.47
CDH1-209ENST00000566510 ATAD2Q6PL18 1390 aa17.98■□□□□ 0.47
CDH1-209ENST00000566510 IPO8O15397 1037 aaKnown RBP17.98■□□□□ 0.47
CDH1-209ENST00000566510 CDK19Q9BWU1 502 aa17.98■□□□□ 0.47
CDH1-209ENST00000566510 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
CDH1-209ENST00000566510 PIK3C2BO00750 1634 aa17.97■□□□□ 0.47
CDH1-209ENST00000566510 MYO5BQ9ULV0 1848 aa17.97■□□□□ 0.47
CDH1-209ENST00000566510 LNPKQ9C0E8 428 aa17.96■□□□□ 0.47
CDH1-209ENST00000566510 KIF16BQ96L93 1317 aa17.96■□□□□ 0.47
CDH1-209ENST00000566510 IL16Q14005 1332 aa17.96■□□□□ 0.47
CDH1-209ENST00000566510 PRKAR2BP31323 418 aa17.95■□□□□ 0.46
CDH1-209ENST00000566510 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
CDH1-209ENST00000566510 ZBTB40Q9NUA8 1239 aa17.95■□□□□ 0.46
CDH1-209ENST00000566510 HMOX1P09601 288 aa17.95■□□□□ 0.46
CDH1-209ENST00000566510 FBXO31Q5XUX0 539 aaPredicted RBP17.95■□□□□ 0.46
CDH1-209ENST00000566510 GZF1Q9H116 711 aaPredicted RBP17.95■□□□□ 0.46
CDH1-209ENST00000566510 COL3A1P02461 1466 aaPredicted RBP17.94■□□□□ 0.46
CDH1-209ENST00000566510 SMC5Q8IY18 1101 aa17.94■□□□□ 0.46
CDH1-209ENST00000566510 YTHDC2Q9H6S0 1430 aaKnown RBP17.93■□□□□ 0.46
CDH1-209ENST00000566510 ELL2O00472 640 aaPredicted RBP17.93■□□□□ 0.46
CDH1-209ENST00000566510 THUMPD2Q9BTF0 503 aaKnown RBP17.93■□□□□ 0.46
CDH1-209ENST00000566510 PTPRMP28827 1452 aa17.93■□□□□ 0.46
CDH1-209ENST00000566510 FCHSD2O94868 740 aa17.92■□□□□ 0.46
CDH1-209ENST00000566510 HSCBQ8IWL3 235 aa17.92■□□□□ 0.46
CDH1-209ENST00000566510 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
CDH1-209ENST00000566510 CD163L1Q9NR16 1453 aa17.91■□□□□ 0.46
CDH1-209ENST00000566510 WAPLQ7Z5K2 1190 aa17.91■□□□□ 0.46
CDH1-209ENST00000566510 C1orf115Q9H7X2 142 aa17.91■□□□□ 0.46
CDH1-209ENST00000566510 MCM4P33991 863 aa17.9■□□□□ 0.46
CDH1-209ENST00000566510 ZFYVE9O95405 1425 aa17.9■□□□□ 0.46
CDH1-209ENST00000566510 YEATS2Q9ULM3 1422 aa17.9■□□□□ 0.46
CDH1-209ENST00000566510 NUCB1Q02818 461 aa17.9■□□□□ 0.46
CDH1-209ENST00000566510 ALDH1L2Q3SY69 923 aa17.9■□□□□ 0.46
CDH1-209ENST00000566510 ANKRD45Q5TZF3 282 aa17.9■□□□□ 0.46
CDH1-209ENST00000566510 PHACTR3Q96KR7 559 aa17.9■□□□□ 0.46
CDH1-209ENST00000566510 CHMP5Q9NZZ3 219 aa17.9■□□□□ 0.46
CDH1-209ENST00000566510 ARHGAP31Q2M1Z3 1444 aa17.89■□□□□ 0.46
CDH1-209ENST00000566510 CHD1LQ86WJ1 897 aa17.89■□□□□ 0.45
CDH1-209ENST00000566510 L1TD1Q5T7N2 865 aaKnown RBP17.89■□□□□ 0.45
CDH1-209ENST00000566510 POLKQ9UBT6 870 aa17.89■□□□□ 0.45
CDH1-209ENST00000566510 RSPH6AQ9H0K4 717 aa17.88■□□□□ 0.45
CDH1-209ENST00000566510 ANKRD26Q9UPS8 1709 aa17.88■□□□□ 0.45
CDH1-209ENST00000566510 NEO1Q92859 1461 aa17.88■□□□□ 0.45
CDH1-209ENST00000566510 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
CDH1-209ENST00000566510 TSPYL6Q8N831 410 aa17.86■□□□□ 0.45
CDH1-209ENST00000566510 TMEM131LA2VDJ0 1609 aa17.86■□□□□ 0.45
CDH1-209ENST00000566510 EMILIN1Q9Y6C2 1016 aa17.86■□□□□ 0.45
CDH1-209ENST00000566510 LRRC7Q96NW7 1537 aa17.86■□□□□ 0.45
CDH1-209ENST00000566510 MED14O60244 1454 aa17.86■□□□□ 0.45
CDH1-209ENST00000566510 GOLGA6L3A6NEY3 463 aa17.85■□□□□ 0.45
CDH1-209ENST00000566510 NFE2L2Q16236 605 aa17.85■□□□□ 0.45
CDH1-209ENST00000566510 FAM43AQ8N2R8 423 aa17.85■□□□□ 0.45
CDH1-209ENST00000566510 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
CDH1-209ENST00000566510 EIF5BO60841 1220 aaKnown RBP17.84■□□□□ 0.45
CDH1-209ENST00000566510 VAMP4O75379 141 aa17.84■□□□□ 0.45
CDH1-209ENST00000566510 ZBTB7BO15156 539 aaPredicted RBP17.84■□□□□ 0.45
CDH1-209ENST00000566510 TRAK2O60296 914 aa17.84■□□□□ 0.45
CDH1-209ENST00000566510 KIF20BQ96Q89 1820 aa17.84■□□□□ 0.45
CDH1-209ENST00000566510 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.45
CDH1-209ENST00000566510 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
CDH1-209ENST00000566510 ALKQ9UM73 1620 aa17.83■□□□□ 0.44
CDH1-209ENST00000566510 HSP90AA1P07900 732 aaKnown RBP17.83■□□□□ 0.44
CDH1-209ENST00000566510 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
CDH1-209ENST00000566510 MRPL50Q8N5N7 158 aaKnown RBP17.82■□□□□ 0.44
CDH1-209ENST00000566510 ZRANB1Q9UGI0 708 aa17.82■□□□□ 0.44
CDH1-209ENST00000566510 FAM135BQ49AJ0 1406 aa17.82■□□□□ 0.44
CDH1-209ENST00000566510 GNAI1P63096 354 aa17.82■□□□□ 0.44
CDH1-209ENST00000566510 NME9Q86XW9 330 aa17.82■□□□□ 0.44
CDH1-209ENST00000566510 ZNF428Q96B54 188 aa17.82■□□□□ 0.44
CDH1-209ENST00000566510 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
CDH1-209ENST00000566510 ARHGEF40Q8TER5 1519 aa17.81■□□□□ 0.44
CDH1-209ENST00000566510 MBIPQ9NS73 344 aa17.81■□□□□ 0.44
CDH1-209ENST00000566510 CLTCQ00610 1675 aaKnown RBP17.81■□□□□ 0.44
CDH1-209ENST00000566510 RBM25P49756 843 aaKnown RBP17.81■□□□□ 0.44
CDH1-209ENST00000566510 CHMP4BQ9H444 224 aaKnown RBP17.81■□□□□ 0.44
CDH1-209ENST00000566510 RICTORQ6R327 1708 aa17.81■□□□□ 0.44
CDH1-209ENST00000566510 PPIP5K1Q6PFW1 1433 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms