RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-233ENST00000566376 Q6ZNB5 142 aa10.08□□□□□ -0.8
TCF4-233ENST00000566376 PAXIP1Q6ZW49 1069 aaPredicted RBP10.08□□□□□ -0.8
TCF4-233ENST00000566376 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
TCF4-233ENST00000566376 SCAF11Q99590 1463 aaKnown RBP10.08□□□□□ -0.8
TCF4-233ENST00000566376 NPHP4O75161 1426 aaPredicted RBP10.07□□□□□ -0.8
TCF4-233ENST00000566376 CPS1P31327 1500 aa10.07□□□□□ -0.8
TCF4-233ENST00000566376 ZFYVE9O95405 1425 aa10.07□□□□□ -0.8
TCF4-233ENST00000566376 NAIPQ13075 1403 aa10.07□□□□□ -0.8
TCF4-233ENST00000566376 PPLO60437 1756 aa10.06□□□□□ -0.8
TCF4-233ENST00000566376 XRN1Q8IZH2 1706 aaKnown RBP10.05□□□□□ -0.8
TCF4-233ENST00000566376 ARHGAP33O14559 1287 aa10.05□□□□□ -0.8
TCF4-233ENST00000566376 PTPN5P54829 565 aa10.05□□□□□ -0.8
TCF4-233ENST00000566376 FAM50AQ14320 339 aaKnown RBP10.05□□□□□ -0.8
TCF4-233ENST00000566376 LRRC7Q96NW7 1537 aa10.05□□□□□ -0.8
TCF4-233ENST00000566376 TRPM2O94759 1503 aa10.04□□□□□ -0.8
TCF4-233ENST00000566376 HAP1P54257 671 aaPredicted RBP10.03□□□□□ -0.8
TCF4-233ENST00000566376 NEXMIFQ5QGS0 1516 aa10.02□□□□□ -0.8
TCF4-233ENST00000566376 LTKP29376 864 aa10.02□□□□□ -0.81
TCF4-233ENST00000566376 TMEM2Q9UHN6 1383 aa10.01□□□□□ -0.81
TCF4-233ENST00000566376 NALCNQ8IZF0 1738 aa10.01□□□□□ -0.81
TCF4-233ENST00000566376 HFM1A2PYH4 1435 aa10□□□□□ -0.81
TCF4-233ENST00000566376 SETBP1Q9Y6X0 1596 aa10□□□□□ -0.81
TCF4-233ENST00000566376 KANK1Q14678 1352 aa10□□□□□ -0.81
TCF4-233ENST00000566376 IDI1Q13907 227 aa9.99□□□□□ -0.81
TCF4-233ENST00000566376 DIP2AQ14689 1571 aa9.99□□□□□ -0.81
TCF4-233ENST00000566376 SOX12O15370 315 aa9.98□□□□□ -0.81
TCF4-233ENST00000566376 ROBO1Q9Y6N7 1651 aa9.98□□□□□ -0.81
TCF4-233ENST00000566376 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.98□□□□□ -0.81
TCF4-233ENST00000566376 ADAMTS13Q76LX8 1427 aa9.98□□□□□ -0.81
TCF4-233ENST00000566376 A0A0G2JS52 829 aa9.97□□□□□ -0.81
TCF4-233ENST00000566376 TK2O00142 265 aa9.97□□□□□ -0.81
TCF4-233ENST00000566376 HRO43593 1189 aa9.97□□□□□ -0.81
TCF4-233ENST00000566376 DMRTA1Q5VZB9 504 aa9.97□□□□□ -0.81
TCF4-233ENST00000566376 MS4A4AQ96JQ5 239 aa9.97□□□□□ -0.81
TCF4-233ENST00000566376 PSEN2P49810 448 aa9.96□□□□□ -0.82
TCF4-233ENST00000566376 THEMISQ8N1K5 641 aaPredicted RBP9.96□□□□□ -0.82
TCF4-233ENST00000566376 NKTRP30414 1462 aaKnown RBP9.96□□□□□ -0.82
TCF4-233ENST00000566376 NLRP6P59044 892 aa9.95□□□□□ -0.82
TCF4-233ENST00000566376 ANKLE2Q86XL3 938 aa9.95□□□□□ -0.82
TCF4-233ENST00000566376 PHF8Q9UPP1 1060 aa9.95□□□□□ -0.82
TCF4-233ENST00000566376 PCDHGA4Q9Y5G9 962 aa9.95□□□□□ -0.82
TCF4-233ENST00000566376 RIMS2Q9UQ26 1411 aa9.95□□□□□ -0.82
TCF4-233ENST00000566376 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
TCF4-233ENST00000566376 ASXL1Q8IXJ9 1541 aa9.94□□□□□ -0.82
TCF4-233ENST00000566376 NUP155O75694 1391 aa9.94□□□□□ -0.82
TCF4-233ENST00000566376 ITGAEP38570 1179 aa9.94□□□□□ -0.82
TCF4-233ENST00000566376 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
TCF4-233ENST00000566376 PTPRUQ92729 1446 aa9.93□□□□□ -0.82
TCF4-233ENST00000566376 PLEKHG1Q9ULL1 1385 aa9.92□□□□□ -0.82
TCF4-233ENST00000566376 IFFO2Q5TF58 517 aa9.92□□□□□ -0.82
TCF4-233ENST00000566376 VSIG10Q8N0Z9 540 aa9.92□□□□□ -0.82
TCF4-233ENST00000566376 COL16A1Q07092 1604 aaPredicted RBP9.92□□□□□ -0.82
TCF4-233ENST00000566376 NHSL1Q5SYE7 1610 aa9.92□□□□□ -0.82
TCF4-233ENST00000566376 PHLPP1O60346 1717 aa9.91□□□□□ -0.82
TCF4-233ENST00000566376 GTPBP6O43824 516 aaPredicted RBP9.91□□□□□ -0.82
TCF4-233ENST00000566376 NKX1-1Q15270 411 aaPredicted RBP9.91□□□□□ -0.82
TCF4-233ENST00000566376 TXNDC2Q86VQ3 553 aa9.9□□□□□ -0.82
TCF4-233ENST00000566376 RGPD8O14715 1765 aaPredicted RBP9.9□□□□□ -0.82
TCF4-233ENST00000566376 SLC52A1Q9NWF4 448 aa9.89□□□□□ -0.83
TCF4-233ENST00000566376 LAMC1P11047 1609 aa9.89□□□□□ -0.83
TCF4-233ENST00000566376 PSDA5PKW4 1024 aaPredicted RBP9.88□□□□□ -0.83
TCF4-233ENST00000566376 SHPRHQ149N8 1683 aa9.87□□□□□ -0.83
TCF4-233ENST00000566376 C2orf72A6NCS6 295 aa9.87□□□□□ -0.83
TCF4-233ENST00000566376 SPATA31E1Q6ZUB1 1445 aa9.87□□□□□ -0.83
TCF4-233ENST00000566376 TMEM94Q12767 1356 aa9.87□□□□□ -0.83
TCF4-233ENST00000566376 UBAP1LF5GYI3 381 aa9.86□□□□□ -0.83
TCF4-233ENST00000566376 PRAG1Q86YV5 1406 aa9.86□□□□□ -0.83
TCF4-233ENST00000566376 SLC26A8Q96RN1 970 aa9.86□□□□□ -0.83
TCF4-233ENST00000566376 AHDC1Q5TGY3 1603 aaPredicted RBP9.85□□□□□ -0.83
TCF4-233ENST00000566376 NUTM2DQ5VT03 806 aaPredicted RBP9.84□□□□□ -0.83
TCF4-233ENST00000566376 RBM33Q96EV2 1170 aaKnown RBP9.84□□□□□ -0.83
TCF4-233ENST00000566376 MFRPQ9BY79 579 aa9.84□□□□□ -0.83
TCF4-233ENST00000566376 FMN2Q9NZ56 1722 aa9.83□□□□□ -0.84
TCF4-233ENST00000566376 HSPA1LP34931 641 aa9.83□□□□□ -0.84
TCF4-233ENST00000566376 METP08581 1390 aa9.83□□□□□ -0.84
TCF4-233ENST00000566376 ILDR2Q71H61 639 aa9.82□□□□□ -0.84
TCF4-233ENST00000566376 ARHGEF28Q8N1W1 1705 aaKnown RBP9.82□□□□□ -0.84
TCF4-233ENST00000566376 MARF1Q9Y4F3 1742 aaKnown RBP9.82□□□□□ -0.84
TCF4-233ENST00000566376 NRXN1Q9ULB1 1477 aa9.81□□□□□ -0.84
TCF4-233ENST00000566376 PIK3R4Q99570 1358 aa9.81□□□□□ -0.84
TCF4-233ENST00000566376 RAB3GAP2Q9H2M9 1393 aa9.81□□□□□ -0.84
TCF4-233ENST00000566376 SLC34A2O95436 690 aa9.81□□□□□ -0.84
TCF4-233ENST00000566376 KCNA6P17658 529 aa9.81□□□□□ -0.84
TCF4-233ENST00000566376 EID1Q9Y6B2 187 aa9.81□□□□□ -0.84
TCF4-233ENST00000566376 ABCA3Q99758 1704 aa9.81□□□□□ -0.84
TCF4-233ENST00000566376 GOLGA8CPA6NN73 597 aa9.8□□□□□ -0.84
TCF4-233ENST00000566376 USP32Q8NFA0 1604 aa9.8□□□□□ -0.84
TCF4-233ENST00000566376 FAM135BQ49AJ0 1406 aa9.8□□□□□ -0.84
TCF4-233ENST00000566376 SETD5Q9C0A6 1442 aa9.8□□□□□ -0.84
TCF4-233ENST00000566376 CDC42BPGQ6DT37 1551 aa9.8□□□□□ -0.84
TCF4-233ENST00000566376 KIF3CO14782 793 aa9.79□□□□□ -0.84
TCF4-233ENST00000566376 PIP4K2BP78356 416 aa9.79□□□□□ -0.84
TCF4-233ENST00000566376 KCNK17Q96T54 332 aa9.79□□□□□ -0.84
TCF4-233ENST00000566376 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
TCF4-233ENST00000566376 PIK3C2GO75747 1445 aa9.79□□□□□ -0.84
TCF4-233ENST00000566376 PTCH1Q13635 1447 aa9.79□□□□□ -0.84
TCF4-233ENST00000566376 LRP6O75581 1613 aa9.78□□□□□ -0.84
TCF4-233ENST00000566376 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
TCF4-233ENST00000566376 TRAF7Q6Q0C0 670 aa9.78□□□□□ -0.84
TCF4-233ENST00000566376 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms