RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 PAK3O75914 559 aaPredicted RBP30.68■■■□□ 2.5
SPG7-214ENST00000566371 TIMELESSQ9UNS1 1208 aa30.68■■■□□ 2.5
SPG7-214ENST00000566371 BCL9LQ86UU0 1499 aa30.68■■■□□ 2.5
SPG7-214ENST00000566371 RBM6P78332 1123 aaKnown RBP30.67■■■□□ 2.5
SPG7-214ENST00000566371 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.67■■■□□ 2.5
SPG7-214ENST00000566371 CRYBG1Q9Y4K1 1723 aa30.67■■■□□ 2.5
SPG7-214ENST00000566371 TRPC5Q9UL62 973 aaPredicted RBP30.66■■■□□ 2.5
SPG7-214ENST00000566371 SLIT2O94813 1529 aa30.66■■■□□ 2.5
SPG7-214ENST00000566371 ATRNO75882 1429 aa30.65■■■□□ 2.5
SPG7-214ENST00000566371 BRD4O60885 1362 aaPredicted RBP30.64■■■□□ 2.5
SPG7-214ENST00000566371 CABP1Q9NZU7 370 aa30.62■■■□□ 2.49
SPG7-214ENST00000566371 PLEKHG5O94827 1062 aa30.61■■■□□ 2.49
SPG7-214ENST00000566371 ATAD2Q6PL18 1390 aa30.61■■■□□ 2.49
SPG7-214ENST00000566371 NWD2Q9ULI1 1742 aa30.61■■■□□ 2.49
SPG7-214ENST00000566371 PLCH1Q4KWH8 1693 aa30.6■■■□□ 2.49
SPG7-214ENST00000566371 UNC5CLQ8IV45 518 aa30.58■■■□□ 2.49
SPG7-214ENST00000566371 USP6P35125 1406 aa30.57■■■□□ 2.48
SPG7-214ENST00000566371 RGS12O14924 1447 aa30.56■■■□□ 2.48
SPG7-214ENST00000566371 PHRF1Q9P1Y6 1649 aaKnown RBP30.56■■■□□ 2.48
SPG7-214ENST00000566371 COL14A1Q05707 1796 aaKnown RBP30.55■■■□□ 2.48
SPG7-214ENST00000566371 FAM83GA6ND36 823 aa30.53■■■□□ 2.48
SPG7-214ENST00000566371 ABTB2Q8N961 1025 aa30.53■■■□□ 2.48
SPG7-214ENST00000566371 CCER1Q8TC90 406 aaPredicted RBP30.53■■■□□ 2.48
SPG7-214ENST00000566371 AKAP12Q02952 1782 aa30.53■■■□□ 2.48
SPG7-214ENST00000566371 SSH2Q76I76 1423 aa30.52■■■□□ 2.48
SPG7-214ENST00000566371 ZNF692Q9BU19 519 aaPredicted RBP30.51■■■□□ 2.47
SPG7-214ENST00000566371 SLC24A1O60721 1099 aa30.5■■■□□ 2.47
SPG7-214ENST00000566371 GJD4Q96KN9 370 aaPredicted RBP30.5■■■□□ 2.47
SPG7-214ENST00000566371 PUS7Q96PZ0 661 aaKnown RBP30.5■■■□□ 2.47
SPG7-214ENST00000566371 CPSF1Q10570 1443 aaKnown RBP30.49■■■□□ 2.47
SPG7-214ENST00000566371 ST20-MTHFSA0A0A6YYL1 179 aa30.49■■■□□ 2.47
SPG7-214ENST00000566371 NUTM2GQ5VZR2 741 aa30.49■■■□□ 2.47
SPG7-214ENST00000566371 TESK2Q96S53 571 aa30.49■■■□□ 2.47
SPG7-214ENST00000566371 NRAPQ86VF7 1730 aa30.49■■■□□ 2.47
SPG7-214ENST00000566371 USP19O94966 1318 aa30.48■■■□□ 2.47
SPG7-214ENST00000566371 NRKQ7Z2Y5 1582 aa30.48■■■□□ 2.47
SPG7-214ENST00000566371 USP47Q96K76 1375 aa30.47■■■□□ 2.47
SPG7-214ENST00000566371 VPS72Q15906 364 aa30.47■■■□□ 2.47
SPG7-214ENST00000566371 GLI3P10071 1580 aa30.46■■■□□ 2.47
SPG7-214ENST00000566371 NLRP13Q86W25 1043 aa30.46■■■□□ 2.47
SPG7-214ENST00000566371 PRDM11Q9NQV5 511 aa30.46■■■□□ 2.47
SPG7-214ENST00000566371 PIK3C2AO00443 1686 aa30.45■■■□□ 2.46
SPG7-214ENST00000566371 KIAA0232Q92628 1395 aa30.44■■■□□ 2.46
SPG7-214ENST00000566371 BTG4Q9NY30 223 aa30.44■■■□□ 2.46
SPG7-214ENST00000566371 MON2Q7Z3U7 1717 aa30.44■■■□□ 2.46
SPG7-214ENST00000566371 CPDO75976 1380 aa30.41■■■□□ 2.46
SPG7-214ENST00000566371 KTN1Q86UP2 1357 aaKnown RBP30.41■■■□□ 2.46
SPG7-214ENST00000566371 TTC21AQ8NDW8 1320 aa30.41■■■□□ 2.46
SPG7-214ENST00000566371 CD163L1Q9NR16 1453 aa30.4■■■□□ 2.46
SPG7-214ENST00000566371 SLIT3O75094 1523 aa30.4■■■□□ 2.46
SPG7-214ENST00000566371 TTC21BQ7Z4L5 1316 aa30.4■■■□□ 2.46
SPG7-214ENST00000566371 NINLQ9Y2I6 1382 aa30.39■■■□□ 2.45
SPG7-214ENST00000566371 GCP02774 474 aa30.38■■■□□ 2.45
SPG7-214ENST00000566371 NLRP6P59044 892 aa30.38■■■□□ 2.45
SPG7-214ENST00000566371 ZC3H6P61129 1189 aaKnown RBP30.38■■■□□ 2.45
SPG7-214ENST00000566371 TMC1Q8TDI8 760 aa30.37■■■□□ 2.45
SPG7-214ENST00000566371 UPF1Q92900 1129 aaKnown RBP eCLIP30.35■■■□□ 2.45
SPG7-214ENST00000566371 CCDC9Q9Y3X0 531 aaKnown RBP30.35■■■□□ 2.45
SPG7-214ENST00000566371 LMO7Q8WWI1 1683 aa30.34■■■□□ 2.45
SPG7-214ENST00000566371 CHRNA2Q15822 529 aa30.34■■■□□ 2.45
SPG7-214ENST00000566371 HDGFL2Q7Z4V5 671 aaPredicted RBP30.34■■■□□ 2.45
SPG7-214ENST00000566371 SLC12A5Q9H2X9 1139 aa30.34■■■□□ 2.45
SPG7-214ENST00000566371 TERF2IPQ9NYB0 399 aa30.34■■■□□ 2.45
SPG7-214ENST00000566371 ONECUT3O60422 494 aaPredicted RBP30.33■■■□□ 2.45
SPG7-214ENST00000566371 TMF1P82094 1093 aa30.33■■■□□ 2.45
SPG7-214ENST00000566371 EDC4Q6P2E9 1401 aaKnown RBP30.3■■■□□ 2.44
SPG7-214ENST00000566371 A0A1W2PP64 1363 aa30.3■■■□□ 2.44
SPG7-214ENST00000566371 USP54Q70EL1 1684 aa30.3■■■□□ 2.44
SPG7-214ENST00000566371 SPATA31A5Q5VU36 1347 aa30.3■■■□□ 2.44
SPG7-214ENST00000566371 SPATA31A7Q8IWB4 1347 aa30.3■■■□□ 2.44
SPG7-214ENST00000566371 CAMTA1Q9Y6Y1 1673 aa30.29■■■□□ 2.44
SPG7-214ENST00000566371 CDCA8Q53HL2 280 aa30.27■■■□□ 2.44
SPG7-214ENST00000566371 SEPT12Q8IYM1 358 aa30.27■■■□□ 2.44
SPG7-214ENST00000566371 KCNH5Q8NCM2 988 aa30.27■■■□□ 2.44
SPG7-214ENST00000566371 USP31Q70CQ4 1352 aa30.27■■■□□ 2.44
SPG7-214ENST00000566371 EP400Q96L91 3159 aa30.26■■■□□ 2.43
SPG7-214ENST00000566371 BRWD3Q6RI45 1802 aa30.25■■■□□ 2.43
SPG7-214ENST00000566371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.25■■■□□ 2.43
SPG7-214ENST00000566371 AATKQ6ZMQ8 1374 aa30.25■■■□□ 2.43
SPG7-214ENST00000566371 NFAT5O94916 1531 aa30.23■■■□□ 2.43
SPG7-214ENST00000566371 STRN4Q9NRL3 753 aa30.23■■■□□ 2.43
SPG7-214ENST00000566371 SPATA31A1Q5TZJ5 1347 aa30.22■■■□□ 2.43
SPG7-214ENST00000566371 EVA1CP58658 441 aa30.22■■■□□ 2.43
SPG7-214ENST00000566371 FAM98CQ17RN3 349 aaKnown RBP30.22■■■□□ 2.43
SPG7-214ENST00000566371 COL5A2P05997 1499 aaPredicted RBP30.22■■■□□ 2.43
SPG7-214ENST00000566371 THSD7AQ9UPZ6 1657 aa30.21■■■□□ 2.43
SPG7-214ENST00000566371 ANKRD36BQ8N2N9 1353 aa30.21■■■□□ 2.43
SPG7-214ENST00000566371 COL18A1P39060 1754 aa30.2■■■□□ 2.43
SPG7-214ENST00000566371 NME9Q86XW9 330 aa30.2■■■□□ 2.43
SPG7-214ENST00000566371 ARHGEF25Q86VW2 580 aa30.19■■■□□ 2.42
SPG7-214ENST00000566371 ABCC6O95255 1503 aa30.18■■■□□ 2.42
SPG7-214ENST00000566371 A0A0G2JS52 829 aa30.16■■■□□ 2.42
SPG7-214ENST00000566371 MYT1Q01538 1121 aa30.16■■■□□ 2.42
SPG7-214ENST00000566371 LARP1Q6PKG0 1096 aaKnown RBP30.16■■■□□ 2.42
SPG7-214ENST00000566371 KRT27Q7Z3Y8 459 aa30.16■■■□□ 2.42
SPG7-214ENST00000566371 ZRANB1Q9UGI0 708 aa30.16■■■□□ 2.42
SPG7-214ENST00000566371 OVOS2A0A0J9YW53 1432 aa30.15■■■□□ 2.42
SPG7-214ENST00000566371 OVOS2Q6IE36 1432 aa30.15■■■□□ 2.42
SPG7-214ENST00000566371 ZBTB7CA1YPR0 619 aa30.15■■■□□ 2.42
SPG7-214ENST00000566371 EIF4G2P78344 907 aaKnown RBP eCLIP30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms