RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 ZNF428Q96B54 188 aa14□□□□□ -0.17
TCF4-232ENST00000566286 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
TCF4-232ENST00000566286 DIP2BQ9P265 1576 aa14□□□□□ -0.17
TCF4-232ENST00000566286 ERVK-7P63135 1459 aa14□□□□□ -0.17
TCF4-232ENST00000566286 UPF2Q9HAU5 1272 aaKnown RBP14□□□□□ -0.17
TCF4-232ENST00000566286 MYOM2P54296 1465 aa13.99□□□□□ -0.17
TCF4-232ENST00000566286 NLRP1Q9C000 1473 aa13.99□□□□□ -0.17
TCF4-232ENST00000566286 RAPGEF3O95398 923 aa13.99□□□□□ -0.17
TCF4-232ENST00000566286 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
TCF4-232ENST00000566286 SEMA3EO15041 775 aa13.98□□□□□ -0.17
TCF4-232ENST00000566286 COG6Q9Y2V7 657 aa13.98□□□□□ -0.17
TCF4-232ENST00000566286 UGGT1Q9NYU2 1555 aa13.98□□□□□ -0.17
TCF4-232ENST00000566286 MYO3AQ8NEV4 1616 aa13.98□□□□□ -0.17
TCF4-232ENST00000566286 SBNO2Q9Y2G9 1366 aa13.97□□□□□ -0.17
TCF4-232ENST00000566286 L1TD1Q5T7N2 865 aaKnown RBP13.97□□□□□ -0.17
TCF4-232ENST00000566286 KIF1BO60333 1816 aa13.97□□□□□ -0.17
TCF4-232ENST00000566286 PANK1Q8TE04 598 aa13.96□□□□□ -0.17
TCF4-232ENST00000566286 SHPRHQ149N8 1683 aa13.96□□□□□ -0.18
TCF4-232ENST00000566286 AEBP1Q8IUX7 1158 aa13.96□□□□□ -0.18
TCF4-232ENST00000566286 ABCC3O15438 1527 aa13.96□□□□□ -0.18
TCF4-232ENST00000566286 SEC24BO95487 1268 aa13.95□□□□□ -0.18
TCF4-232ENST00000566286 HMGB1P09429 215 aaKnown RBP13.94□□□□□ -0.18
TCF4-232ENST00000566286 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
TCF4-232ENST00000566286 MROH2AA6NES4 1674 aa13.94□□□□□ -0.18
TCF4-232ENST00000566286 NPATQ14207 1427 aa13.94□□□□□ -0.18
TCF4-232ENST00000566286 IFT172Q9UG01 1749 aa13.94□□□□□ -0.18
TCF4-232ENST00000566286 RBM25P49756 843 aaKnown RBP13.94□□□□□ -0.18
TCF4-232ENST00000566286 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
TCF4-232ENST00000566286 RUNDC1Q96C34 613 aa13.94□□□□□ -0.18
TCF4-232ENST00000566286 TBC1D32Q96NH3 1257 aa13.94□□□□□ -0.18
TCF4-232ENST00000566286 KDM4CQ9H3R0 1056 aa13.94□□□□□ -0.18
TCF4-232ENST00000566286 IQSEC2Q5JU85 1478 aa13.94□□□□□ -0.18
TCF4-232ENST00000566286 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
TCF4-232ENST00000566286 FOXD4L5Q5VV16 416 aaPredicted RBP13.93□□□□□ -0.18
TCF4-232ENST00000566286 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
TCF4-232ENST00000566286 FOXD4L4Q8WXT5 416 aaPredicted RBP13.93□□□□□ -0.18
TCF4-232ENST00000566286 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
TCF4-232ENST00000566286 POGKQ9P215 609 aa13.93□□□□□ -0.18
TCF4-232ENST00000566286 CAMSAP1Q5T5Y3 1602 aa13.93□□□□□ -0.18
TCF4-232ENST00000566286 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
TCF4-232ENST00000566286 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
TCF4-232ENST00000566286 HSP90B1P14625 803 aaKnown RBP13.93□□□□□ -0.18
TCF4-232ENST00000566286 SLKQ9H2G2 1235 aaPredicted RBP13.93□□□□□ -0.18
TCF4-232ENST00000566286 YEATS2Q9ULM3 1422 aa13.93□□□□□ -0.18
TCF4-232ENST00000566286 CFAP65Q6ZU64 1925 aaKnown RBP13.92□□□□□ -0.18
TCF4-232ENST00000566286 GGT6Q6P531 493 aa13.92□□□□□ -0.18
TCF4-232ENST00000566286 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
TCF4-232ENST00000566286 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
TCF4-232ENST00000566286 ADGRB3O60242 1522 aa13.91□□□□□ -0.18
TCF4-232ENST00000566286 CCDC27Q2M243 656 aa13.91□□□□□ -0.18
TCF4-232ENST00000566286 TRAIPQ9BWF2 469 aa13.91□□□□□ -0.18
TCF4-232ENST00000566286 RYDENQ9NUL5 291 aaKnown RBP13.91□□□□□ -0.18
TCF4-232ENST00000566286 USP32Q8NFA0 1604 aa13.91□□□□□ -0.18
TCF4-232ENST00000566286 BARGINQ6ZT62 677 aa13.9□□□□□ -0.18
TCF4-232ENST00000566286 SETBP1Q9Y6X0 1596 aa13.9□□□□□ -0.18
TCF4-232ENST00000566286 NRXN1Q9ULB1 1477 aa13.9□□□□□ -0.18
TCF4-232ENST00000566286 SIGLEC1Q9BZZ2 1709 aa13.9□□□□□ -0.18
TCF4-232ENST00000566286 ZC3H13Q5T200 1668 aaKnown RBP13.9□□□□□ -0.18
TCF4-232ENST00000566286 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
TCF4-232ENST00000566286 PDZRN3Q9UPQ7 1066 aa13.9□□□□□ -0.18
TCF4-232ENST00000566286 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
TCF4-232ENST00000566286 NSD3Q9BZ95 1437 aa13.89□□□□□ -0.19
TCF4-232ENST00000566286 TCP11L2Q8N4U5 519 aa13.89□□□□□ -0.19
TCF4-232ENST00000566286 TBC1D2Q9BYX2 928 aa13.89□□□□□ -0.19
TCF4-232ENST00000566286 ARHGEF1Q92888 912 aaKnown RBP13.88□□□□□ -0.19
TCF4-232ENST00000566286 MYH16Q9H6N6 1097 aa13.88□□□□□ -0.19
TCF4-232ENST00000566286 ADGRF5Q8IZF2 1346 aa13.87□□□□□ -0.19
TCF4-232ENST00000566286 CFAP53Q96M91 514 aa13.87□□□□□ -0.19
TCF4-232ENST00000566286 NOS1P29475 1434 aa13.87□□□□□ -0.19
TCF4-232ENST00000566286 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
TCF4-232ENST00000566286 RLBP1P12271 317 aa13.87□□□□□ -0.19
TCF4-232ENST00000566286 TMCO4Q5TGY1 634 aa13.87□□□□□ -0.19
TCF4-232ENST00000566286 PIK3C2BO00750 1634 aa13.86□□□□□ -0.19
TCF4-232ENST00000566286 PPLO60437 1756 aa13.86□□□□□ -0.19
TCF4-232ENST00000566286 CT47B1P0C2W7 299 aaPredicted RBP13.86□□□□□ -0.19
TCF4-232ENST00000566286 AK7Q96M32 723 aa13.86□□□□□ -0.19
TCF4-232ENST00000566286 STK24Q9Y6E0 443 aa13.86□□□□□ -0.19
TCF4-232ENST00000566286 ARHGAP31Q2M1Z3 1444 aa13.86□□□□□ -0.19
TCF4-232ENST00000566286 MVPQ14764 893 aaKnown RBP13.85□□□□□ -0.19
TCF4-232ENST00000566286 UBE2Q2Q8WVN8 375 aa13.85□□□□□ -0.19
TCF4-232ENST00000566286 QRICH2Q9H0J4 1663 aa13.85□□□□□ -0.19
TCF4-232ENST00000566286 BCL11BQ9C0K0 894 aaPredicted RBP13.85□□□□□ -0.19
TCF4-232ENST00000566286 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
TCF4-232ENST00000566286 GOLGA6L3A6NEY3 463 aa13.84□□□□□ -0.19
TCF4-232ENST00000566286 MCM4P33991 863 aa13.84□□□□□ -0.19
TCF4-232ENST00000566286 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
TCF4-232ENST00000566286 ADGRB2O60241 1585 aa13.83□□□□□ -0.19
TCF4-232ENST00000566286 REREQ9P2R6 1566 aa13.83□□□□□ -0.19
TCF4-232ENST00000566286 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.2
TCF4-232ENST00000566286 MFAP1P55081 439 aaKnown RBP13.83□□□□□ -0.2
TCF4-232ENST00000566286 CHMP5Q9NZZ3 219 aa13.83□□□□□ -0.2
TCF4-232ENST00000566286 NSD2O96028 1365 aa13.83□□□□□ -0.2
TCF4-232ENST00000566286 FSD2A1L4K1 749 aa13.82□□□□□ -0.2
TCF4-232ENST00000566286 FTSJ3Q8IY81 847 aaKnown RBP13.82□□□□□ -0.2
TCF4-232ENST00000566286 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
TCF4-232ENST00000566286 BCL2L13Q9BXK5 485 aa13.82□□□□□ -0.2
TCF4-232ENST00000566286 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
TCF4-232ENST00000566286 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
TCF4-232ENST00000566286 TNNQ9UQP3 1299 aa13.81□□□□□ -0.2
TCF4-232ENST00000566286 TNNT2P45379 298 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms