RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 ZNF692Q9BU19 519 aaPredicted RBP20.38■□□□□ 0.85
SPG7-213ENST00000566221 PANK3Q9H999 370 aa20.37■□□□□ 0.85
SPG7-213ENST00000566221 ALS2Q96Q42 1657 aa20.37■□□□□ 0.85
SPG7-213ENST00000566221 NSD3Q9BZ95 1437 aa20.36■□□□□ 0.85
SPG7-213ENST00000566221 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
SPG7-213ENST00000566221 PIK3C2AO00443 1686 aa20.35■□□□□ 0.85
SPG7-213ENST00000566221 USP54Q70EL1 1684 aa20.35■□□□□ 0.85
SPG7-213ENST00000566221 FOXO3O43524 673 aa20.35■□□□□ 0.85
SPG7-213ENST00000566221 POTEAQ6S8J7 498 aa20.35■□□□□ 0.85
SPG7-213ENST00000566221 COL16A1Q07092 1604 aaPredicted RBP20.35■□□□□ 0.85
SPG7-213ENST00000566221 SSH2Q76I76 1423 aa20.34■□□□□ 0.85
SPG7-213ENST00000566221 PSME1Q06323 249 aa20.33■□□□□ 0.85
SPG7-213ENST00000566221 MARF1Q9Y4F3 1742 aaKnown RBP20.32■□□□□ 0.84
SPG7-213ENST00000566221 KRT28Q7Z3Y7 464 aa20.31■□□□□ 0.84
SPG7-213ENST00000566221 CARD14Q9BXL6 1004 aa20.31■□□□□ 0.84
SPG7-213ENST00000566221 SBNO1A3KN83 1393 aa20.31■□□□□ 0.84
SPG7-213ENST00000566221 SOS2Q07890 1332 aaPredicted RBP20.3■□□□□ 0.84
SPG7-213ENST00000566221 TTC21AQ8NDW8 1320 aa20.3■□□□□ 0.84
SPG7-213ENST00000566221 TNS3Q68CZ2 1445 aa20.3■□□□□ 0.84
SPG7-213ENST00000566221 DDX17Q92841 729 aaKnown RBP20.3■□□□□ 0.84
SPG7-213ENST00000566221 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
SPG7-213ENST00000566221 XPCQ01831 940 aaPredicted RBP20.29■□□□□ 0.84
SPG7-213ENST00000566221 CGNL1Q0VF96 1302 aa20.28■□□□□ 0.84
SPG7-213ENST00000566221 TTC21BQ7Z4L5 1316 aa20.28■□□□□ 0.84
SPG7-213ENST00000566221 NSD2O96028 1365 aa20.28■□□□□ 0.84
SPG7-213ENST00000566221 CRYBG1Q9Y4K1 1723 aa20.27■□□□□ 0.84
SPG7-213ENST00000566221 PER1O15534 1290 aaPredicted RBP20.27■□□□□ 0.84
SPG7-213ENST00000566221 ABCA3Q99758 1704 aa20.27■□□□□ 0.83
SPG7-213ENST00000566221 SHPRHQ149N8 1683 aa20.26■□□□□ 0.83
SPG7-213ENST00000566221 NPC1L1Q9UHC9 1359 aa20.26■□□□□ 0.83
SPG7-213ENST00000566221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.26■□□□□ 0.83
SPG7-213ENST00000566221 COL22A1Q8NFW1 1626 aaPredicted RBP20.26■□□□□ 0.83
SPG7-213ENST00000566221 ARHGEF10O15013 1369 aa20.25■□□□□ 0.83
SPG7-213ENST00000566221 PHRF1Q9P1Y6 1649 aaKnown RBP20.25■□□□□ 0.83
SPG7-213ENST00000566221 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
SPG7-213ENST00000566221 SPATA31A3Q5VYP0 1347 aa20.24■□□□□ 0.83
SPG7-213ENST00000566221 OVOS2A0A0J9YW53 1432 aa20.23■□□□□ 0.83
SPG7-213ENST00000566221 OVOS2Q6IE36 1432 aa20.23■□□□□ 0.83
SPG7-213ENST00000566221 AMER1Q5JTC6 1135 aaPredicted RBP20.22■□□□□ 0.83
SPG7-213ENST00000566221 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
SPG7-213ENST00000566221 NME9Q86XW9 330 aa20.21■□□□□ 0.83
SPG7-213ENST00000566221 ABTB2Q8N961 1025 aa20.21■□□□□ 0.83
SPG7-213ENST00000566221 FYB1O15117 783 aa20.2■□□□□ 0.82
SPG7-213ENST00000566221 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
SPG7-213ENST00000566221 SLIT3O75094 1523 aa20.2■□□□□ 0.82
SPG7-213ENST00000566221 LMOD2Q6P5Q4 547 aa20.19■□□□□ 0.82
SPG7-213ENST00000566221 MAP2P11137 1827 aaKnown RBP20.18■□□□□ 0.82
SPG7-213ENST00000566221 GGNBP2Q9H3C7 697 aa20.18■□□□□ 0.82
SPG7-213ENST00000566221 LTN1O94822 1766 aa20.18■□□□□ 0.82
SPG7-213ENST00000566221 NLRP6P59044 892 aa20.17■□□□□ 0.82
SPG7-213ENST00000566221 NLRP13Q86W25 1043 aa20.17■□□□□ 0.82
SPG7-213ENST00000566221 COG3Q96JB2 828 aa20.17■□□□□ 0.82
SPG7-213ENST00000566221 PNPLA6Q8IY17 1366 aa20.17■□□□□ 0.82
SPG7-213ENST00000566221 CC2D1BQ5T0F9 858 aaKnown RBP20.16■□□□□ 0.82
SPG7-213ENST00000566221 USP19O94966 1318 aa20.16■□□□□ 0.82
SPG7-213ENST00000566221 NFAT5O94916 1531 aa20.15■□□□□ 0.82
SPG7-213ENST00000566221 PARD3Q8TEW0 1356 aa20.14■□□□□ 0.81
SPG7-213ENST00000566221 JCADQ9P266 1359 aa20.14■□□□□ 0.81
SPG7-213ENST00000566221 NUTM2GQ5VZR2 741 aa20.14■□□□□ 0.81
SPG7-213ENST00000566221 DIEXFQ68CQ4 756 aaKnown RBP20.14■□□□□ 0.81
SPG7-213ENST00000566221 ZRANB1Q9UGI0 708 aa20.14■□□□□ 0.81
SPG7-213ENST00000566221 MORC1Q86VD1 984 aa20.13■□□□□ 0.81
SPG7-213ENST00000566221 CNGB1Q14028 1251 aaPredicted RBP20.11■□□□□ 0.81
SPG7-213ENST00000566221 UPF1Q92900 1129 aaKnown RBP eCLIP20.1■□□□□ 0.81
SPG7-213ENST00000566221 ANP32CO43423 234 aa20.09■□□□□ 0.81
SPG7-213ENST00000566221 RALBP1Q15311 655 aa20.09■□□□□ 0.81
SPG7-213ENST00000566221 KCNH5Q8NCM2 988 aa20.09■□□□□ 0.81
SPG7-213ENST00000566221 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.81
SPG7-213ENST00000566221 PRKRIP1Q9H875 184 aaPredicted RBP20.08■□□□□ 0.81
SPG7-213ENST00000566221 ABCC6O95255 1503 aa20.07■□□□□ 0.8
SPG7-213ENST00000566221 SMG6Q86US8 1419 aaKnown RBP20.06■□□□□ 0.8
SPG7-213ENST00000566221 PEAK1Q9H792 1746 aa20.06■□□□□ 0.8
SPG7-213ENST00000566221 RGPD5Q99666 1765 aa20.06■□□□□ 0.8
SPG7-213ENST00000566221 PLEKHG5O94827 1062 aa20.05■□□□□ 0.8
SPG7-213ENST00000566221 GCP02774 474 aa20.05■□□□□ 0.8
SPG7-213ENST00000566221 TNNT2P45379 298 aaPredicted RBP20.05■□□□□ 0.8
SPG7-213ENST00000566221 HAP1P54257 671 aaPredicted RBP20.05■□□□□ 0.8
SPG7-213ENST00000566221 CABLES1Q8TDN4 633 aa20.05■□□□□ 0.8
SPG7-213ENST00000566221 COL14A1Q05707 1796 aaKnown RBP20.05■□□□□ 0.8
SPG7-213ENST00000566221 SPATA31A6Q5VVP1 1343 aa20.04■□□□□ 0.8
SPG7-213ENST00000566221 PLCH1Q4KWH8 1693 aa20.04■□□□□ 0.8
SPG7-213ENST00000566221 COL18A1P39060 1754 aa20.04■□□□□ 0.8
SPG7-213ENST00000566221 SOX12O15370 315 aa20.04■□□□□ 0.8
SPG7-213ENST00000566221 MYBBP1AQ9BQG0 1328 aaKnown RBP20.03■□□□□ 0.8
SPG7-213ENST00000566221 CPDO75976 1380 aa20.03■□□□□ 0.8
SPG7-213ENST00000566221 CDK12Q9NYV4 1490 aaPredicted RBP20.03■□□□□ 0.8
SPG7-213ENST00000566221 MEX3CQ5U5Q3 659 aaKnown RBP20.02■□□□□ 0.8
SPG7-213ENST00000566221 RTL1A6NKG5 1358 aa20.02■□□□□ 0.8
SPG7-213ENST00000566221 LMO7Q8WWI1 1683 aa20.02■□□□□ 0.8
SPG7-213ENST00000566221 KIF24Q5T7B8 1368 aa20.01■□□□□ 0.79
SPG7-213ENST00000566221 NWD2Q9ULI1 1742 aa20■□□□□ 0.79
SPG7-213ENST00000566221 PPP2R1AP30153 589 aa20■□□□□ 0.79
SPG7-213ENST00000566221 FAM208AQ9UK61 1670 aaKnown RBP20■□□□□ 0.79
SPG7-213ENST00000566221 MAP3K19Q56UN5 1328 aa20■□□□□ 0.79
SPG7-213ENST00000566221 LRP6O75581 1613 aa19.99■□□□□ 0.79
SPG7-213ENST00000566221 KIAA0232Q92628 1395 aa19.99■□□□□ 0.79
SPG7-213ENST00000566221 RRS1Q15050 365 aaKnown RBP19.99■□□□□ 0.79
SPG7-213ENST00000566221 FLT4P35916 1363 aa19.98■□□□□ 0.79
SPG7-213ENST00000566221 ZC3H6P61129 1189 aaKnown RBP19.98■□□□□ 0.79
SPG7-213ENST00000566221 ZNF772Q68DY9 489 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms