RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 NCKAP5LQ9HCH0 1330 aa4.24□□□□□ -1.73
CHD9-216ENST00000565803 SAMD9LQ8IVG5 1584 aa4.24□□□□□ -1.73
CHD9-216ENST00000565803 PAK3O75914 559 aaPredicted RBP4.24□□□□□ -1.73
CHD9-216ENST00000565803 TNS1Q9HBL0 1735 aaKnown RBP4.23□□□□□ -1.73
CHD9-216ENST00000565803 STK25O00506 426 aa4.23□□□□□ -1.73
CHD9-216ENST00000565803 PPP1R37O75864 691 aa4.23□□□□□ -1.73
CHD9-216ENST00000565803 PRDM15P57071 1507 aaPredicted RBP4.23□□□□□ -1.73
CHD9-216ENST00000565803 CHD2O14647 1828 aaKnown RBP4.23□□□□□ -1.73
CHD9-216ENST00000565803 NCOA2Q15596 1464 aa4.23□□□□□ -1.73
CHD9-216ENST00000565803 NLRP6P59044 892 aa4.23□□□□□ -1.73
CHD9-216ENST00000565803 EFCAB3Q8N7B9 438 aa4.23□□□□□ -1.73
CHD9-216ENST00000565803 CLSPNQ9HAW4 1339 aa4.23□□□□□ -1.73
CHD9-216ENST00000565803 ATAD2Q6PL18 1390 aa4.23□□□□□ -1.73
CHD9-216ENST00000565803 FAM50AQ14320 339 aaKnown RBP4.22□□□□□ -1.73
CHD9-216ENST00000565803 ZNF772Q68DY9 489 aaPredicted RBP4.22□□□□□ -1.73
CHD9-216ENST00000565803 ATN1P54259 1190 aaPredicted RBP4.22□□□□□ -1.73
CHD9-216ENST00000565803 CHD4Q14839 1912 aa4.22□□□□□ -1.73
CHD9-216ENST00000565803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.22□□□□□ -1.73
CHD9-216ENST00000565803 USP32Q8NFA0 1604 aa4.22□□□□□ -1.73
CHD9-216ENST00000565803 CASZ1Q86V15 1759 aa4.21□□□□□ -1.73
CHD9-216ENST00000565803 SETD5Q9C0A6 1442 aa4.21□□□□□ -1.73
CHD9-216ENST00000565803 CENPBP07199 599 aaPredicted RBP4.21□□□□□ -1.73
CHD9-216ENST00000565803 FOSBP53539 338 aa4.21□□□□□ -1.73
CHD9-216ENST00000565803 RTEL1-TNFRSF6BF6WH68 1400 aa4.21□□□□□ -1.74
CHD9-216ENST00000565803 FAM9BQ8IZU0 186 aa4.21□□□□□ -1.74
CHD9-216ENST00000565803 SP7Q8TDD2 431 aaPredicted RBP4.21□□□□□ -1.74
CHD9-216ENST00000565803 KDM4CQ9H3R0 1056 aa4.21□□□□□ -1.74
CHD9-216ENST00000565803 DCCP43146 1447 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 TRAIPQ9BWF2 469 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 STK24Q9Y6E0 443 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 ATRNO75882 1429 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 CDC42BPAQ5VT25 1732 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 OS9Q13438 667 aaPredicted RBP4.2□□□□□ -1.74
CHD9-216ENST00000565803 PRXQ9BXM0 1461 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 SCAPERQ9BY12 1400 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 SEMA3EO15041 775 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 CNPY4Q8N129 248 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 PHF8Q9UPP1 1060 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 NWD2Q9ULI1 1742 aa4.2□□□□□ -1.74
CHD9-216ENST00000565803 ZMYM3Q14202 1370 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 ADGRB3O60242 1522 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 FLIIQ13045 1269 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 GLIPR1L2Q4G1C9 344 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 PRAG1Q86YV5 1406 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 PRDM16Q9HAZ2 1276 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 NUP188Q5SRE5 1749 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 ANKRD62A6NC57 917 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 ANAPC15P60006 121 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 TMEM106CQ9BVX2 250 aa4.19□□□□□ -1.74
CHD9-216ENST00000565803 BRWD3Q6RI45 1802 aa4.18□□□□□ -1.74
CHD9-216ENST00000565803 SYCP2Q9BX26 1530 aa4.18□□□□□ -1.74
CHD9-216ENST00000565803 KIAA1107Q9UPP5 1409 aa4.18□□□□□ -1.74
CHD9-216ENST00000565803 TRAK2O60296 914 aa4.18□□□□□ -1.74
CHD9-216ENST00000565803 PTCH1Q13635 1447 aa4.18□□□□□ -1.74
CHD9-216ENST00000565803 ANKRD13AQ8IZ07 590 aa4.18□□□□□ -1.74
CHD9-216ENST00000565803 NINLQ9Y2I6 1382 aa4.18□□□□□ -1.74
CHD9-216ENST00000565803 KIAA1210Q9ULL0 1709 aa4.18□□□□□ -1.74
CHD9-216ENST00000565803 ACIN1Q9UKV3 1341 aaKnown RBP4.18□□□□□ -1.74
CHD9-216ENST00000565803 QSER1Q2KHR3 1735 aa4.18□□□□□ -1.74
CHD9-216ENST00000565803 GORABQ5T7V8 394 aa4.17□□□□□ -1.74
CHD9-216ENST00000565803 BLMP54132 1417 aaPredicted RBP4.17□□□□□ -1.74
CHD9-216ENST00000565803 IRF5Q13568 498 aa4.17□□□□□ -1.74
CHD9-216ENST00000565803 GPATCH11Q8N954 259 aa4.17□□□□□ -1.74
CHD9-216ENST00000565803 MYH16Q9H6N6 1097 aa4.17□□□□□ -1.74
CHD9-216ENST00000565803 CC2D2BQ6DHV5 1058 aa4.17□□□□□ -1.74
CHD9-216ENST00000565803 WWC1Q8IX03 1113 aa4.17□□□□□ -1.74
CHD9-216ENST00000565803 MAST1Q9Y2H9 1570 aa4.17□□□□□ -1.74
CHD9-216ENST00000565803 POTEJP0CG39 1038 aa4.16□□□□□ -1.74
CHD9-216ENST00000565803 SHANK3Q9BYB0 1731 aa4.16□□□□□ -1.74
CHD9-216ENST00000565803 ADGRB2O60241 1585 aa4.16□□□□□ -1.74
CHD9-216ENST00000565803 LRRIQ1Q96JM4 1722 aa4.16□□□□□ -1.74
CHD9-216ENST00000565803 ARHGAP35Q9NRY4 1499 aa4.16□□□□□ -1.74
CHD9-216ENST00000565803 PTGER2P43116 358 aa4.16□□□□□ -1.74
CHD9-216ENST00000565803 FAM117AQ9C073 453 aa4.16□□□□□ -1.74
CHD9-216ENST00000565803 OCEL1Q9H607 264 aa4.16□□□□□ -1.74
CHD9-216ENST00000565803 SERPINA10Q9UK55 444 aa4.16□□□□□ -1.74
CHD9-216ENST00000565803 XRN1Q8IZH2 1706 aaKnown RBP4.15□□□□□ -1.74
CHD9-216ENST00000565803 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.15□□□□□ -1.74
CHD9-216ENST00000565803 RFX1P22670 979 aa4.15□□□□□ -1.74
CHD9-216ENST00000565803 TEX2Q8IWB9 1127 aa4.15□□□□□ -1.74
CHD9-216ENST00000565803 SLC39A7Q92504 469 aa4.15□□□□□ -1.74
CHD9-216ENST00000565803 CABP2Q9NPB3 220 aa4.15□□□□□ -1.74
CHD9-216ENST00000565803 GPHNQ9NQX3 736 aaPredicted RBP4.15□□□□□ -1.74
CHD9-216ENST00000565803 TRIM35Q9UPQ4 493 aa4.15□□□□□ -1.74
CHD9-216ENST00000565803 ARHGAP31Q2M1Z3 1444 aa4.15□□□□□ -1.74
CHD9-216ENST00000565803 C7P10643 843 aa4.15□□□□□ -1.75
CHD9-216ENST00000565803 FOXK1P85037 733 aa4.15□□□□□ -1.75
CHD9-216ENST00000565803 AK7Q96M32 723 aa4.15□□□□□ -1.75
CHD9-216ENST00000565803 MARCH6O60337 910 aa4.15□□□□□ -1.75
CHD9-216ENST00000565803 MICALL2Q8IY33 904 aa4.15□□□□□ -1.75
CHD9-216ENST00000565803 ARHGEF1Q92888 912 aaKnown RBP4.15□□□□□ -1.75
CHD9-216ENST00000565803 LAS1LQ9Y4W2 734 aaKnown RBP4.15□□□□□ -1.75
CHD9-216ENST00000565803 SETQ01105 290 aaPredicted RBP4.14□□□□□ -1.75
CHD9-216ENST00000565803 FOXD4L6Q3SYB3 417 aaPredicted RBP4.14□□□□□ -1.75
CHD9-216ENST00000565803 TMEM92Q6UXU6 159 aa4.14□□□□□ -1.75
CHD9-216ENST00000565803 FOXD4L3Q6VB84 417 aaPredicted RBP4.14□□□□□ -1.75
CHD9-216ENST00000565803 RBM27Q9P2N5 1060 aaKnown RBP4.14□□□□□ -1.75
CHD9-216ENST00000565803 TMEM131LA2VDJ0 1609 aa4.14□□□□□ -1.75
CHD9-216ENST00000565803 EFCAB6Q5THR3 1501 aa4.14□□□□□ -1.75
CHD9-216ENST00000565803 THSD7AQ9UPZ6 1657 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms