RNA–Protein interactions for RNA: ENST00000565723.1

RPL4-209, Transcript of ribosomal protein L4, human

TSL 3

Gene RPL4, Length 408 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL4-209	ENST00000565723	STAC3	Q96MF2	364 aa		13.85	□□□□□ -0.19
RPL4-209	ENST00000565723	PRDM11	Q9NQV5	511 aa		13.85	□□□□□ -0.19
RPL4-209	ENST00000565723	TRAK1	Q9UPV9	953 aa		13.85	□□□□□ -0.19
RPL4-209	ENST00000565723	COL14A1	Q05707	1796 aa	Known RBP	13.85	□□□□□ -0.19
RPL4-209	ENST00000565723	DISP2	A7MBM2	1401 aa		13.84	□□□□□ -0.19
RPL4-209	ENST00000565723	PAK3	O75914	559 aa	Predicted RBP	13.84	□□□□□ -0.19
RPL4-209	ENST00000565723	R3HDM1	Q15032	1099 aa	Known RBP	13.84	□□□□□ -0.19
RPL4-209	ENST00000565723	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.84	□□□□□ -0.19
RPL4-209	ENST00000565723	ADGRB2	O60241	1585 aa		13.83	□□□□□ -0.19
RPL4-209	ENST00000565723	FAM182B	Q5T319	152 aa		13.83	□□□□□ -0.2
RPL4-209	ENST00000565723	NRAP	Q86VF7	1730 aa		13.83	□□□□□ -0.2
RPL4-209	ENST00000565723	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.83	□□□□□ -0.2
RPL4-209	ENST00000565723	RGPD1	P0DJD0	1748 aa		13.82	□□□□□ -0.2
RPL4-209	ENST00000565723	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.82	□□□□□ -0.2
RPL4-209	ENST00000565723	SPATA31A1	Q5TZJ5	1347 aa		13.82	□□□□□ -0.2
RPL4-209	ENST00000565723	PRR36	Q9H6K5	1346 aa		13.82	□□□□□ -0.2
RPL4-209	ENST00000565723	ALS2	Q96Q42	1657 aa		13.82	□□□□□ -0.2
RPL4-209	ENST00000565723	EZH2	Q15910	746 aa	Known RBP	13.81	□□□□□ -0.2
RPL4-209	ENST00000565723	CAMKK2	Q96RR4	588 aa		13.81	□□□□□ -0.2
RPL4-209	ENST00000565723	PARD3	Q8TEW0	1356 aa		13.81	□□□□□ -0.2
RPL4-209	ENST00000565723	TULP4	Q9NRJ4	1543 aa		13.8	□□□□□ -0.2
RPL4-209	ENST00000565723	ADGRB1	O14514	1584 aa		13.79	□□□□□ -0.2
RPL4-209	ENST00000565723	TRIM37	O94972	964 aa		13.79	□□□□□ -0.2
RPL4-209	ENST00000565723	APBA3	O96018	575 aa		13.79	□□□□□ -0.2
RPL4-209	ENST00000565723	EVA1C	P58658	441 aa		13.79	□□□□□ -0.2
RPL4-209	ENST00000565723	DCAF11	Q8TEB1	546 aa		13.79	□□□□□ -0.2
RPL4-209	ENST00000565723	KDM2A	Q9Y2K7	1162 aa		13.79	□□□□□ -0.2
RPL4-209	ENST00000565723	PDE3B	Q13370	1112 aa		13.78	□□□□□ -0.2
RPL4-209	ENST00000565723	NBPF8	Q3BBV2	869 aa		13.78	□□□□□ -0.2
RPL4-209	ENST00000565723	NBPF14	Q5TI25	921 aa		13.78	□□□□□ -0.2
RPL4-209	ENST00000565723	BARGIN	Q6ZT62	677 aa		13.78	□□□□□ -0.2
RPL4-209	ENST00000565723	NUDT16	Q96DE0	195 aa	Known RBP	13.78	□□□□□ -0.2
RPL4-209	ENST00000565723	STRN4	Q9NRL3	753 aa		13.78	□□□□□ -0.2
RPL4-209	ENST00000565723	KIAA0232	Q92628	1395 aa		13.78	□□□□□ -0.2
RPL4-209	ENST00000565723	THSD7A	Q9UPZ6	1657 aa		13.78	□□□□□ -0.2
RPL4-209	ENST00000565723	CHRNA2	Q15822	529 aa		13.77	□□□□□ -0.21
RPL4-209	ENST00000565723	C11orf95	C9JLR9	678 aa	Predicted RBP	13.76	□□□□□ -0.21
RPL4-209	ENST00000565723	ZC3H6	P61129	1189 aa	Known RBP	13.76	□□□□□ -0.21
RPL4-209	ENST00000565723	USP35	Q9P2H5	1018 aa		13.75	□□□□□ -0.21
RPL4-209	ENST00000565723	CCDC61	Q9Y6R9	512 aa		13.75	□□□□□ -0.21
RPL4-209	ENST00000565723	TNS1	Q9HBL0	1735 aa	Known RBP	13.74	□□□□□ -0.21
RPL4-209	ENST00000565723	CRYBG1	Q9Y4K1	1723 aa		13.74	□□□□□ -0.21
RPL4-209	ENST00000565723	ADRA2B	P18089	450 aa		13.74	□□□□□ -0.21
RPL4-209	ENST00000565723	CDK19	Q9BWU1	502 aa		13.74	□□□□□ -0.21
RPL4-209	ENST00000565723	THRAP3	Q9Y2W1	955 aa	Known RBP	13.74	□□□□□ -0.21
RPL4-209	ENST00000565723	ATP7B	P35670	1465 aa		13.74	□□□□□ -0.21
RPL4-209	ENST00000565723	TCP11L2	Q8N4U5	519 aa		13.73	□□□□□ -0.21
RPL4-209	ENST00000565723	ABTB2	Q8N961	1025 aa		13.73	□□□□□ -0.21
RPL4-209	ENST00000565723	POLR3A	O14802	1390 aa	Predicted RBP	13.72	□□□□□ -0.21
RPL4-209	ENST00000565723	ACE	P12821	1306 aa		13.72	□□□□□ -0.21
RPL4-209	ENST00000565723	PLEKHG3	A1L390	1219 aa		13.72	□□□□□ -0.21
RPL4-209	ENST00000565723	DCAF8L1	A6NGE4	600 aa		13.72	□□□□□ -0.21
RPL4-209	ENST00000565723	NUTM2G	Q5VZR2	741 aa		13.72	□□□□□ -0.21
RPL4-209	ENST00000565723	RAB3GAP2	Q9H2M9	1393 aa		13.71	□□□□□ -0.21
RPL4-209	ENST00000565723	ITSN1	Q15811	1721 aa		13.71	□□□□□ -0.21
RPL4-209	ENST00000565723	LARP1	Q6PKG0	1096 aa	Known RBP	13.71	□□□□□ -0.21
RPL4-209	ENST00000565723	NLRP13	Q86W25	1043 aa		13.71	□□□□□ -0.21
RPL4-209	ENST00000565723	SSH2	Q76I76	1423 aa		13.71	□□□□□ -0.22
RPL4-209	ENST00000565723	CPD	O75976	1380 aa		13.71	□□□□□ -0.22
RPL4-209	ENST00000565723	YY1	P25490	414 aa		13.7	□□□□□ -0.22
RPL4-209	ENST00000565723	SPON1	Q9HCB6	807 aa		13.7	□□□□□ -0.22
RPL4-209	ENST00000565723	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.68	□□□□□ -0.22
RPL4-209	ENST00000565723	KCNQ2	O43526	872 aa		13.68	□□□□□ -0.22
RPL4-209	ENST00000565723	GC	P02774	474 aa		13.68	□□□□□ -0.22
RPL4-209	ENST00000565723	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.68	□□□□□ -0.22
RPL4-209	ENST00000565723	CAMTA1	Q9Y6Y1	1673 aa		13.68	□□□□□ -0.22
RPL4-209	ENST00000565723	BRD4	O60885	1362 aa	Predicted RBP	13.67	□□□□□ -0.22
RPL4-209	ENST00000565723	USP19	O94966	1318 aa		13.66	□□□□□ -0.22
RPL4-209	ENST00000565723	PLSCR1	O15162	318 aa		13.66	□□□□□ -0.22
RPL4-209	ENST00000565723	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.66	□□□□□ -0.22
RPL4-209	ENST00000565723	RREB1	Q92766	1687 aa		13.65	□□□□□ -0.22
RPL4-209	ENST00000565723	NINL	Q9Y2I6	1382 aa		13.64	□□□□□ -0.23
RPL4-209	ENST00000565723	SRPK2	P78362	688 aa	Known RBP	13.64	□□□□□ -0.23
RPL4-209	ENST00000565723	CRB1	P82279	1406 aa		13.64	□□□□□ -0.23
RPL4-209	ENST00000565723	LMO7	Q8WWI1	1683 aa		13.63	□□□□□ -0.23
RPL4-209	ENST00000565723	NRK	Q7Z2Y5	1582 aa		13.62	□□□□□ -0.23
RPL4-209	ENST00000565723	NUP188	Q5SRE5	1749 aa		13.62	□□□□□ -0.23
RPL4-209	ENST00000565723	DDB1	Q16531	1140 aa		13.62	□□□□□ -0.23
RPL4-209	ENST00000565723	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.62	□□□□□ -0.23
RPL4-209	ENST00000565723	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.62	□□□□□ -0.23
RPL4-209	ENST00000565723	OVOS2	A0A0G2JMS6	1433 aa		13.62	□□□□□ -0.23
RPL4-209	ENST00000565723	OVOS2	A0A0J9YW53	1432 aa		13.62	□□□□□ -0.23
RPL4-209	ENST00000565723	OVOS2	Q6IE36	1432 aa		13.62	□□□□□ -0.23
RPL4-209	ENST00000565723	COL5A2	P05997	1499 aa	Predicted RBP	13.61	□□□□□ -0.23
RPL4-209	ENST00000565723	AATK	Q6ZMQ8	1374 aa		13.61	□□□□□ -0.23
RPL4-209	ENST00000565723	TOPAZ1	Q8N9V7	1692 aa		13.61	□□□□□ -0.23
RPL4-209	ENST00000565723	NLRP6	P59044	892 aa		13.61	□□□□□ -0.23
RPL4-209	ENST00000565723	PPIP5K1	Q6PFW1	1433 aa		13.61	□□□□□ -0.23
RPL4-209	ENST00000565723	PARP4	Q9UKK3	1724 aa	Known RBP	13.61	□□□□□ -0.23
RPL4-209	ENST00000565723	TOM1L2	Q6ZVM7	507 aa		13.6	□□□□□ -0.23
RPL4-209	ENST00000565723	CABP2	Q9NPB3	220 aa		13.59	□□□□□ -0.23
RPL4-209	ENST00000565723	CABP1	Q9NZU7	370 aa		13.59	□□□□□ -0.23
RPL4-209	ENST00000565723	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.59	□□□□□ -0.23
RPL4-209	ENST00000565723	KIAA1210	Q9ULL0	1709 aa		13.59	□□□□□ -0.23
RPL4-209	ENST00000565723	ZBTB7C	A1YPR0	619 aa		13.58	□□□□□ -0.24
RPL4-209	ENST00000565723	NBPF1	Q3BBV0	1214 aa		13.58	□□□□□ -0.24
RPL4-209	ENST00000565723	ZNF692	Q9BU19	519 aa	Predicted RBP	13.57	□□□□□ -0.24
RPL4-209	ENST00000565723	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.57	□□□□□ -0.24
RPL4-209	ENST00000565723	RGPD4	Q7Z3J3	1758 aa		13.57	□□□□□ -0.24
RPL4-209	ENST00000565723	BCL9	O00512	1426 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms