RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 NCOA2Q15596 1464 aa9.67□□□□□ -0.86
UBFD1-204ENST00000565634 RGS12O14924 1447 aa9.67□□□□□ -0.86
UBFD1-204ENST00000565634 PPARGC1BQ86YN6 1023 aaKnown RBP9.67□□□□□ -0.86
UBFD1-204ENST00000565634 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
UBFD1-204ENST00000565634 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
UBFD1-204ENST00000565634 KDM2AQ9Y2K7 1162 aa9.67□□□□□ -0.86
UBFD1-204ENST00000565634 EID1Q9Y6B2 187 aa9.67□□□□□ -0.86
UBFD1-204ENST00000565634 CCNB3Q8WWL7 1395 aa9.66□□□□□ -0.86
UBFD1-204ENST00000565634 CEP152O94986 1710 aa9.66□□□□□ -0.86
UBFD1-204ENST00000565634 LARP6Q9BRS8 491 aaKnown RBP9.66□□□□□ -0.86
UBFD1-204ENST00000565634 KIAA1107Q9UPP5 1409 aa9.65□□□□□ -0.86
UBFD1-204ENST00000565634 SPATA31A6Q5VVP1 1343 aa9.65□□□□□ -0.86
UBFD1-204ENST00000565634 C14orf37Q86TY3 774 aa9.65□□□□□ -0.86
UBFD1-204ENST00000565634 ZNF454Q8N9F8 522 aa9.65□□□□□ -0.86
UBFD1-204ENST00000565634 DDX17Q92841 729 aaKnown RBP9.65□□□□□ -0.86
UBFD1-204ENST00000565634 ANO8Q9HCE9 1232 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-204ENST00000565634 HCSTQ9UBK5 93 aa9.65□□□□□ -0.86
UBFD1-204ENST00000565634 MSH6P52701 1360 aa9.64□□□□□ -0.87
UBFD1-204ENST00000565634 RBM6P78332 1123 aaKnown RBP9.64□□□□□ -0.87
UBFD1-204ENST00000565634 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
UBFD1-204ENST00000565634 FOSBP53539 338 aa9.63□□□□□ -0.87
UBFD1-204ENST00000565634 VPS9D1Q9Y2B5 631 aa9.63□□□□□ -0.87
UBFD1-204ENST00000565634 ERVK-7P63135 1459 aa9.63□□□□□ -0.87
UBFD1-204ENST00000565634 MBD5Q9P267 1494 aa9.63□□□□□ -0.87
UBFD1-204ENST00000565634 MFSD10Q14728 455 aa9.62□□□□□ -0.87
UBFD1-204ENST00000565634 KANK4Q5T7N3 995 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-204ENST00000565634 DEFB132Q7Z7B7 95 aa9.62□□□□□ -0.87
UBFD1-204ENST00000565634 CADPS2Q86UW7 1296 aa9.62□□□□□ -0.87
UBFD1-204ENST00000565634 EVI5O60447 810 aa9.61□□□□□ -0.87
UBFD1-204ENST00000565634 DDX27Q96GQ7 796 aaKnown RBP9.61□□□□□ -0.87
UBFD1-204ENST00000565634 NGLY1Q96IV0 654 aa9.61□□□□□ -0.87
UBFD1-204ENST00000565634 BCL2L12Q9HB09 334 aa9.61□□□□□ -0.87
UBFD1-204ENST00000565634 SHPRHQ149N8 1683 aa9.61□□□□□ -0.87
UBFD1-204ENST00000565634 PIK3C2BO00750 1634 aa9.6□□□□□ -0.87
UBFD1-204ENST00000565634 CCDC18Q5T9S5 1454 aa9.6□□□□□ -0.87
UBFD1-204ENST00000565634 PLEKHH2Q8IVE3 1493 aa9.6□□□□□ -0.87
UBFD1-204ENST00000565634 CDK12Q9NYV4 1490 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-204ENST00000565634 ARHGAP23Q9P227 1491 aa9.6□□□□□ -0.87
UBFD1-204ENST00000565634 CASKIN1Q8WXD9 1431 aa9.6□□□□□ -0.87
UBFD1-204ENST00000565634 TPRNQ4KMQ1 711 aa9.6□□□□□ -0.87
UBFD1-204ENST00000565634 PRDM15P57071 1507 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-204ENST00000565634 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
UBFD1-204ENST00000565634 IDI1Q13907 227 aa9.59□□□□□ -0.87
UBFD1-204ENST00000565634 KCTD12Q96CX2 325 aaKnown RBP9.59□□□□□ -0.87
UBFD1-204ENST00000565634 EMILIN3Q9NT22 766 aa9.59□□□□□ -0.87
UBFD1-204ENST00000565634 PLA2G2EQ9NZK7 142 aa9.59□□□□□ -0.87
UBFD1-204ENST00000565634 ABCC3O15438 1527 aa9.59□□□□□ -0.87
UBFD1-204ENST00000565634 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.59□□□□□ -0.87
UBFD1-204ENST00000565634 LRRC9Q6ZRR7 1453 aa9.59□□□□□ -0.87
UBFD1-204ENST00000565634 MYO5BQ9ULV0 1848 aa9.59□□□□□ -0.88
UBFD1-204ENST00000565634 TIAM1Q13009 1591 aa9.58□□□□□ -0.88
UBFD1-204ENST00000565634 RTEL1-TNFRSF6BF6WH68 1400 aa9.58□□□□□ -0.88
UBFD1-204ENST00000565634 VPS8Q8N3P4 1428 aa9.58□□□□□ -0.88
UBFD1-204ENST00000565634 SLIT1O75093 1534 aa9.58□□□□□ -0.88
UBFD1-204ENST00000565634 PAXIP1Q6ZW49 1069 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-204ENST00000565634 ATAD2Q6PL18 1390 aa9.58□□□□□ -0.88
UBFD1-204ENST00000565634 TMEM2Q9UHN6 1383 aa9.58□□□□□ -0.88
UBFD1-204ENST00000565634 TET3O43151 1660 aa9.58□□□□□ -0.88
UBFD1-204ENST00000565634 KDM5AP29375 1690 aaKnown RBP9.58□□□□□ -0.88
UBFD1-204ENST00000565634 FGD6Q6ZV73 1430 aa9.57□□□□□ -0.88
UBFD1-204ENST00000565634 BRINP3Q76B58 766 aa9.57□□□□□ -0.88
UBFD1-204ENST00000565634 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
UBFD1-204ENST00000565634 SLC4A5Q9BY07 1137 aa9.57□□□□□ -0.88
UBFD1-204ENST00000565634 ATF3P18847 181 aa9.56□□□□□ -0.88
UBFD1-204ENST00000565634 CFAP44Q96MT7 982 aa9.56□□□□□ -0.88
UBFD1-204ENST00000565634 ADAM33Q9BZ11 813 aa9.56□□□□□ -0.88
UBFD1-204ENST00000565634 EP400Q96L91 3159 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 DIP2AQ14689 1571 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 MTUS2Q5JR59 1369 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 BHMG1C9JSJ3 638 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-204ENST00000565634 TSPY4P0CV99 314 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 TSPY10P0CW01 314 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 PTPREP23469 700 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 MAP3K9P80192 1104 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 ZDHHC16Q969W1 377 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 STAC3Q96MF2 364 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 ZBED2Q9BTP6 218 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 USP21Q9UK80 565 aa9.55□□□□□ -0.88
UBFD1-204ENST00000565634 MAST1Q9Y2H9 1570 aa9.54□□□□□ -0.88
UBFD1-204ENST00000565634 AHDC1Q5TGY3 1603 aaPredicted RBP9.53□□□□□ -0.88
UBFD1-204ENST00000565634 YY1P25490 414 aa9.53□□□□□ -0.88
UBFD1-204ENST00000565634 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.53□□□□□ -0.88
UBFD1-204ENST00000565634 BRWD3Q6RI45 1802 aa9.53□□□□□ -0.88
UBFD1-204ENST00000565634 C19orf44Q9H6X5 657 aa9.52□□□□□ -0.89
UBFD1-204ENST00000565634 MROH1Q8NDA8 1641 aa9.52□□□□□ -0.89
UBFD1-204ENST00000565634 CCDC141Q6ZP82 1450 aa9.52□□□□□ -0.89
UBFD1-204ENST00000565634 FYCO1Q9BQS8 1478 aa9.52□□□□□ -0.89
UBFD1-204ENST00000565634 LRRC59Q96AG4 307 aaKnown RBP9.51□□□□□ -0.89
UBFD1-204ENST00000565634 PCDHGA10Q9Y5H3 936 aa9.51□□□□□ -0.89
UBFD1-204ENST00000565634 NWD1Q149M9 1564 aa9.5□□□□□ -0.89
UBFD1-204ENST00000565634 HRCP23327 699 aa9.5□□□□□ -0.89
UBFD1-204ENST00000565634 TRPC5Q9UL62 973 aaPredicted RBP9.5□□□□□ -0.89
UBFD1-204ENST00000565634 NKTRP30414 1462 aaKnown RBP9.5□□□□□ -0.89
UBFD1-204ENST00000565634 CAMSAP2Q08AD1 1489 aa9.5□□□□□ -0.89
UBFD1-204ENST00000565634 EFCAB6Q5THR3 1501 aa9.5□□□□□ -0.89
UBFD1-204ENST00000565634 PPP1R15AO75807 674 aaPredicted RBP9.49□□□□□ -0.89
UBFD1-204ENST00000565634 PTPN5P54829 565 aa9.49□□□□□ -0.89
UBFD1-204ENST00000565634 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
UBFD1-204ENST00000565634 RRP7BPQ9NSQ0 103 aa9.49□□□□□ -0.89
UBFD1-204ENST00000565634 PNPLA6Q8IY17 1366 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms