RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 PLEKHH1Q9ULM0 1364 aa13.85□□□□□ -0.19
CNOT1-207ENST00000565605 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
CNOT1-207ENST00000565605 L3MBTL2Q969R5 705 aa13.85□□□□□ -0.19
CNOT1-207ENST00000565605 SIRT1Q96EB6 747 aa13.85□□□□□ -0.19
CNOT1-207ENST00000565605 RALGAPBQ86X10 1494 aa13.84□□□□□ -0.19
CNOT1-207ENST00000565605 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
CNOT1-207ENST00000565605 DLC1Q96QB1 1528 aa13.84□□□□□ -0.19
CNOT1-207ENST00000565605 GLI3P10071 1580 aa13.83□□□□□ -0.19
CNOT1-207ENST00000565605 DEFB132Q7Z7B7 95 aa13.83□□□□□ -0.2
CNOT1-207ENST00000565605 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
CNOT1-207ENST00000565605 POGKQ9P215 609 aa13.83□□□□□ -0.2
CNOT1-207ENST00000565605 TRAK1Q9UPV9 953 aa13.83□□□□□ -0.2
CNOT1-207ENST00000565605 MARF1Q9Y4F3 1742 aaKnown RBP13.83□□□□□ -0.2
CNOT1-207ENST00000565605 SLIT2O94813 1529 aa13.83□□□□□ -0.2
CNOT1-207ENST00000565605 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
CNOT1-207ENST00000565605 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
CNOT1-207ENST00000565605 KRT28Q7Z3Y7 464 aa13.81□□□□□ -0.2
CNOT1-207ENST00000565605 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
CNOT1-207ENST00000565605 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-207ENST00000565605 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
CNOT1-207ENST00000565605 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
CNOT1-207ENST00000565605 SEPT12Q8IYM1 358 aa13.8□□□□□ -0.2
CNOT1-207ENST00000565605 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-207ENST00000565605 KIAA1210Q9ULL0 1709 aa13.8□□□□□ -0.2
CNOT1-207ENST00000565605 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
CNOT1-207ENST00000565605 ONECUT3O60422 494 aaPredicted RBP13.77□□□□□ -0.21
CNOT1-207ENST00000565605 VPS72Q15906 364 aa13.77□□□□□ -0.21
CNOT1-207ENST00000565605 NBPF1Q3BBV0 1214 aa13.77□□□□□ -0.21
CNOT1-207ENST00000565605 BRWD3Q6RI45 1802 aa13.76□□□□□ -0.21
CNOT1-207ENST00000565605 FMN2Q9NZ56 1722 aa13.76□□□□□ -0.21
CNOT1-207ENST00000565605 USP32Q8NFA0 1604 aa13.76□□□□□ -0.21
CNOT1-207ENST00000565605 PHF8Q9UPP1 1060 aa13.76□□□□□ -0.21
CNOT1-207ENST00000565605 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-207ENST00000565605 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
CNOT1-207ENST00000565605 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
CNOT1-207ENST00000565605 TNS3Q68CZ2 1445 aa13.74□□□□□ -0.21
CNOT1-207ENST00000565605 ROCK2O75116 1388 aaKnown RBP13.74□□□□□ -0.21
CNOT1-207ENST00000565605 CLSPNQ9HAW4 1339 aa13.74□□□□□ -0.21
CNOT1-207ENST00000565605 ARHGEF28Q8N1W1 1705 aaKnown RBP13.74□□□□□ -0.21
CNOT1-207ENST00000565605 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-207ENST00000565605 KRT27Q7Z3Y8 459 aa13.74□□□□□ -0.21
CNOT1-207ENST00000565605 CCDC9Q9Y3X0 531 aaKnown RBP13.74□□□□□ -0.21
CNOT1-207ENST00000565605 TRPM1Q7Z4N2 1603 aa13.74□□□□□ -0.21
CNOT1-207ENST00000565605 EIF3AQ14152 1382 aaKnown RBP13.73□□□□□ -0.21
CNOT1-207ENST00000565605 KIF1AQ12756 1690 aa13.73□□□□□ -0.21
CNOT1-207ENST00000565605 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
CNOT1-207ENST00000565605 PSME1Q06323 249 aa13.73□□□□□ -0.21
CNOT1-207ENST00000565605 SF3B2Q13435 895 aaKnown RBP13.73□□□□□ -0.21
CNOT1-207ENST00000565605 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
CNOT1-207ENST00000565605 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
CNOT1-207ENST00000565605 PSDA5PKW4 1024 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-207ENST00000565605 NBPF8Q3BBV2 869 aa13.72□□□□□ -0.21
CNOT1-207ENST00000565605 CCER1Q8TC90 406 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-207ENST00000565605 ANKARQ7Z5J8 1434 aa13.72□□□□□ -0.21
CNOT1-207ENST00000565605 SBNO1A3KN83 1393 aa13.71□□□□□ -0.21
CNOT1-207ENST00000565605 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-207ENST00000565605 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
CNOT1-207ENST00000565605 PMFBP1Q8TBY8 1022 aa13.71□□□□□ -0.21
CNOT1-207ENST00000565605 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
CNOT1-207ENST00000565605 PLCH1Q4KWH8 1693 aa13.7□□□□□ -0.22
CNOT1-207ENST00000565605 WASLO00401 505 aaPredicted RBP13.7□□□□□ -0.22
CNOT1-207ENST00000565605 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
CNOT1-207ENST00000565605 DCBLD2Q96PD2 775 aa13.69□□□□□ -0.22
CNOT1-207ENST00000565605 ARHGEF10O15013 1369 aa13.69□□□□□ -0.22
CNOT1-207ENST00000565605 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
CNOT1-207ENST00000565605 A0A0G2JS52 829 aa13.68□□□□□ -0.22
CNOT1-207ENST00000565605 MYT1Q01538 1121 aa13.68□□□□□ -0.22
CNOT1-207ENST00000565605 FAM182BQ5T319 152 aa13.68□□□□□ -0.22
CNOT1-207ENST00000565605 CARD11Q9BXL7 1154 aa13.68□□□□□ -0.22
CNOT1-207ENST00000565605 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
CNOT1-207ENST00000565605 TIMELESSQ9UNS1 1208 aa13.68□□□□□ -0.22
CNOT1-207ENST00000565605 SSUH2Q9Y2M2 353 aa13.68□□□□□ -0.22
CNOT1-207ENST00000565605 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
CNOT1-207ENST00000565605 ABCA3Q99758 1704 aa13.67□□□□□ -0.22
CNOT1-207ENST00000565605 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
CNOT1-207ENST00000565605 LRP5O75197 1615 aa13.67□□□□□ -0.22
CNOT1-207ENST00000565605 BAG6P46379 1132 aa13.66□□□□□ -0.22
CNOT1-207ENST00000565605 EN1Q05925 392 aaPredicted RBP13.66□□□□□ -0.22
CNOT1-207ENST00000565605 CDK19Q9BWU1 502 aa13.66□□□□□ -0.22
CNOT1-207ENST00000565605 QRICH2Q9H0J4 1663 aa13.65□□□□□ -0.22
CNOT1-207ENST00000565605 PRR36Q9H6K5 1346 aa13.64□□□□□ -0.23
CNOT1-207ENST00000565605 SRPK2P78362 688 aaKnown RBP13.64□□□□□ -0.23
CNOT1-207ENST00000565605 NRAPQ86VF7 1730 aa13.64□□□□□ -0.23
CNOT1-207ENST00000565605 ATP7BP35670 1465 aa13.63□□□□□ -0.23
CNOT1-207ENST00000565605 NUDT16Q96DE0 195 aaKnown RBP13.63□□□□□ -0.23
CNOT1-207ENST00000565605 SPATA31A5Q5VU36 1347 aa13.63□□□□□ -0.23
CNOT1-207ENST00000565605 SPATA31A7Q8IWB4 1347 aa13.63□□□□□ -0.23
CNOT1-207ENST00000565605 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
CNOT1-207ENST00000565605 R3HDM1Q15032 1099 aaKnown RBP13.62□□□□□ -0.23
CNOT1-207ENST00000565605 EVC2Q86UK5 1308 aa13.62□□□□□ -0.23
CNOT1-207ENST00000565605 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
CNOT1-207ENST00000565605 ATXN8OSP0DMR3 200 aa13.6□□□□□ -0.23
CNOT1-207ENST00000565605 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
CNOT1-207ENST00000565605 ITSN1Q15811 1721 aa13.6□□□□□ -0.23
CNOT1-207ENST00000565605 EZH2Q15910 746 aaKnown RBP13.6□□□□□ -0.23
CNOT1-207ENST00000565605 CABP2Q9NPB3 220 aa13.6□□□□□ -0.23
CNOT1-207ENST00000565605 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
CNOT1-207ENST00000565605 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
CNOT1-207ENST00000565605 COL14A1Q05707 1796 aaKnown RBP13.59□□□□□ -0.23
CNOT1-207ENST00000565605 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms