RNA–Protein interactions for RNA: ENST00000565413.1

E4F1-207, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-207ENST00000565413 BRWD3Q6RI45 1802 aa28.68■■■□□ 2.18
E4F1-207ENST00000565413 NUDT16Q96DE0 195 aaKnown RBP28.67■■■□□ 2.18
E4F1-207ENST00000565413 BTG4Q9NY30 223 aa28.67■■■□□ 2.18
E4F1-207ENST00000565413 COL14A1Q05707 1796 aaKnown RBP28.66■■■□□ 2.18
E4F1-207ENST00000565413 KIAA1210Q9ULL0 1709 aa28.66■■■□□ 2.18
E4F1-207ENST00000565413 ATP7BP35670 1465 aa28.65■■■□□ 2.18
E4F1-207ENST00000565413 ONECUT3O60422 494 aaPredicted RBP28.64■■■□□ 2.18
E4F1-207ENST00000565413 KRT27Q7Z3Y8 459 aa28.64■■■□□ 2.18
E4F1-207ENST00000565413 CDK19Q9BWU1 502 aa28.63■■■□□ 2.17
E4F1-207ENST00000565413 PRDM11Q9NQV5 511 aa28.62■■■□□ 2.17
E4F1-207ENST00000565413 NRAPQ86VF7 1730 aa28.6■■■□□ 2.17
E4F1-207ENST00000565413 FAM98CQ17RN3 349 aaKnown RBP28.59■■■□□ 2.17
E4F1-207ENST00000565413 CCDC61Q9Y6R9 512 aa28.59■■■□□ 2.17
E4F1-207ENST00000565413 CRYBG1Q9Y4K1 1723 aa28.55■■■□□ 2.16
E4F1-207ENST00000565413 ACEP12821 1306 aa28.54■■■□□ 2.16
E4F1-207ENST00000565413 POLR3AO14802 1390 aaPredicted RBP28.53■■■□□ 2.16
E4F1-207ENST00000565413 SRPK2P78362 688 aaKnown RBP28.53■■■□□ 2.16
E4F1-207ENST00000565413 NBPF1Q3BBV0 1214 aa28.53■■■□□ 2.16
E4F1-207ENST00000565413 TOPAZ1Q8N9V7 1692 aa28.53■■■□□ 2.16
E4F1-207ENST00000565413 SPATA31A5Q5VU36 1347 aa28.52■■■□□ 2.16
E4F1-207ENST00000565413 SPATA31A7Q8IWB4 1347 aa28.52■■■□□ 2.16
E4F1-207ENST00000565413 NBPF8Q3BBV2 869 aa28.52■■■□□ 2.16
E4F1-207ENST00000565413 DEFB132Q7Z7B7 95 aa28.52■■■□□ 2.16
E4F1-207ENST00000565413 KIAA0232Q92628 1395 aa28.51■■■□□ 2.16
E4F1-207ENST00000565413 CENPJQ9HC77 1338 aaPredicted RBP28.51■■■□□ 2.15
E4F1-207ENST00000565413 PLEKHG3A1L390 1219 aa28.5■■■□□ 2.15
E4F1-207ENST00000565413 NUTM2GQ5VZR2 741 aa28.5■■■□□ 2.15
E4F1-207ENST00000565413 BAG6P46379 1132 aa28.49■■■□□ 2.15
E4F1-207ENST00000565413 ABTB2Q8N961 1025 aa28.49■■■□□ 2.15
E4F1-207ENST00000565413 PHRF1Q9P1Y6 1649 aaKnown RBP28.49■■■□□ 2.15
E4F1-207ENST00000565413 ZC3H6P61129 1189 aaKnown RBP28.48■■■□□ 2.15
E4F1-207ENST00000565413 CHRNA2Q15822 529 aa28.47■■■□□ 2.15
E4F1-207ENST00000565413 STRN4Q9NRL3 753 aa28.47■■■□□ 2.15
E4F1-207ENST00000565413 PPIP5K1Q6PFW1 1433 aa28.45■■■□□ 2.15
E4F1-207ENST00000565413 EVA1CP58658 441 aa28.45■■■□□ 2.14
E4F1-207ENST00000565413 QRICH2Q9H0J4 1663 aa28.43■■■□□ 2.14
E4F1-207ENST00000565413 SPATA31A1Q5TZJ5 1347 aa28.43■■■□□ 2.14
E4F1-207ENST00000565413 NLRP13Q86W25 1043 aa28.42■■■□□ 2.14
E4F1-207ENST00000565413 CABP2Q9NPB3 220 aa28.42■■■□□ 2.14
E4F1-207ENST00000565413 RGPD1P0DJD0 1748 aa28.4■■■□□ 2.14
E4F1-207ENST00000565413 THSD7AQ9UPZ6 1657 aa28.4■■■□□ 2.14
E4F1-207ENST00000565413 L3MBTL2Q969R5 705 aa28.4■■■□□ 2.14
E4F1-207ENST00000565413 BRD4O60885 1362 aaPredicted RBP28.39■■■□□ 2.14
E4F1-207ENST00000565413 USP35Q9P2H5 1018 aa28.38■■■□□ 2.13
E4F1-207ENST00000565413 NRKQ7Z2Y5 1582 aa28.37■■■□□ 2.13
E4F1-207ENST00000565413 FAM182BQ5T319 152 aa28.37■■■□□ 2.13
E4F1-207ENST00000565413 USP19O94966 1318 aa28.36■■■□□ 2.13
E4F1-207ENST00000565413 EVC2Q86UK5 1308 aa28.36■■■□□ 2.13
E4F1-207ENST00000565413 CPDO75976 1380 aa28.36■■■□□ 2.13
E4F1-207ENST00000565413 SSH2Q76I76 1423 aa28.35■■■□□ 2.13
E4F1-207ENST00000565413 NEUROD1Q13562 356 aa28.34■■■□□ 2.13
E4F1-207ENST00000565413 FAM196AQ6ZSG2 479 aa28.34■■■□□ 2.13
E4F1-207ENST00000565413 GCP02774 474 aa28.33■■■□□ 2.13
E4F1-207ENST00000565413 CABP1Q9NZU7 370 aa28.33■■■□□ 2.13
E4F1-207ENST00000565413 ROCK2O75116 1388 aaKnown RBP28.33■■■□□ 2.13
E4F1-207ENST00000565413 EN1Q05925 392 aaPredicted RBP28.32■■■□□ 2.12
E4F1-207ENST00000565413 PDE3BQ13370 1112 aa28.32■■■□□ 2.12
E4F1-207ENST00000565413 BARGINQ6ZT62 677 aa28.32■■■□□ 2.12
E4F1-207ENST00000565413 SIN3AQ96ST3 1273 aa28.31■■■□□ 2.12
E4F1-207ENST00000565413 TRPM1Q7Z4N2 1603 aa28.31■■■□□ 2.12
E4F1-207ENST00000565413 USP6P35125 1406 aa28.3■■■□□ 2.12
E4F1-207ENST00000565413 NLRP6P59044 892 aa28.3■■■□□ 2.12
E4F1-207ENST00000565413 TCP11L2Q8N4U5 519 aa28.3■■■□□ 2.12
E4F1-207ENST00000565413 CAMTA1Q9Y6Y1 1673 aa28.29■■■□□ 2.12
E4F1-207ENST00000565413 ZBTB7CA1YPR0 619 aa28.29■■■□□ 2.12
E4F1-207ENST00000565413 LARP1Q6PKG0 1096 aaKnown RBP28.29■■■□□ 2.12
E4F1-207ENST00000565413 THRAP3Q9Y2W1 955 aaKnown RBP28.28■■■□□ 2.12
E4F1-207ENST00000565413 LMO7Q8WWI1 1683 aa28.27■■■□□ 2.12
E4F1-207ENST00000565413 DISP2A7MBM2 1401 aa28.26■■■□□ 2.12
E4F1-207ENST00000565413 PSDA5PKW4 1024 aaPredicted RBP28.26■■■□□ 2.11
E4F1-207ENST00000565413 TRIM37O94972 964 aa28.26■■■□□ 2.11
E4F1-207ENST00000565413 TNS1Q9HBL0 1735 aaKnown RBP28.25■■■□□ 2.11
E4F1-207ENST00000565413 ZNF692Q9BU19 519 aaPredicted RBP28.23■■■□□ 2.11
E4F1-207ENST00000565413 COL5A2P05997 1499 aaPredicted RBP28.22■■■□□ 2.11
E4F1-207ENST00000565413 LRP5O75197 1615 aa28.21■■■□□ 2.11
E4F1-207ENST00000565413 APBA3O96018 575 aa28.21■■■□□ 2.11
E4F1-207ENST00000565413 CRB1P82279 1406 aa28.2■■■□□ 2.11
E4F1-207ENST00000565413 C11orf95C9JLR9 678 aaPredicted RBP28.2■■■□□ 2.1
E4F1-207ENST00000565413 AATKQ6ZMQ8 1374 aa28.2■■■□□ 2.1
E4F1-207ENST00000565413 PARD3Q8TEW0 1356 aa28.2■■■□□ 2.1
E4F1-207ENST00000565413 EZH2Q15910 746 aaKnown RBP28.19■■■□□ 2.1
E4F1-207ENST00000565413 SLIT3O75094 1523 aa28.18■■■□□ 2.1
E4F1-207ENST00000565413 PIK3C2AO00443 1686 aa28.17■■■□□ 2.1
E4F1-207ENST00000565413 R3HDM1Q15032 1099 aaKnown RBP28.17■■■□□ 2.1
E4F1-207ENST00000565413 KCNH5Q8NCM2 988 aa28.17■■■□□ 2.1
E4F1-207ENST00000565413 TOM1L2Q6ZVM7 507 aa28.16■■■□□ 2.1
E4F1-207ENST00000565413 TTC21AQ8NDW8 1320 aa28.16■■■□□ 2.1
E4F1-207ENST00000565413 CAMKK2Q96RR4 588 aa28.15■■■□□ 2.1
E4F1-207ENST00000565413 TTC21BQ7Z4L5 1316 aa28.15■■■□□ 2.1
E4F1-207ENST00000565413 PARP4Q9UKK3 1724 aaKnown RBP28.15■■■□□ 2.1
E4F1-207ENST00000565413 AKAP12Q02952 1782 aa28.14■■■□□ 2.09
E4F1-207ENST00000565413 KTN1Q86UP2 1357 aaKnown RBP28.12■■■□□ 2.09
E4F1-207ENST00000565413 CARD11Q9BXL7 1154 aa28.12■■■□□ 2.09
E4F1-207ENST00000565413 SOX12O15370 315 aa28.11■■■□□ 2.09
E4F1-207ENST00000565413 CPSF1Q10570 1443 aaKnown RBP28.1■■■□□ 2.09
E4F1-207ENST00000565413 DDB1Q16531 1140 aa28.1■■■□□ 2.09
E4F1-207ENST00000565413 TONSLQ96HA7 1378 aa28.1■■■□□ 2.09
E4F1-207ENST00000565413 OVOS2A0A0G2JMS6 1433 aa28.09■■■□□ 2.09
E4F1-207ENST00000565413 OVOS2A0A0J9YW53 1432 aa28.09■■■□□ 2.09
E4F1-207ENST00000565413 OVOS2Q6IE36 1432 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms