RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 CRYBG1Q9Y4K1 1723 aa17■□□□□ 0.31
NSMCE1-209ENST00000565384 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
NSMCE1-209ENST00000565384 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
NSMCE1-209ENST00000565384 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
NSMCE1-209ENST00000565384 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
NSMCE1-209ENST00000565384 ATP7BP35670 1465 aa16.98■□□□□ 0.31
NSMCE1-209ENST00000565384 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
NSMCE1-209ENST00000565384 ITSN1Q15811 1721 aa16.96■□□□□ 0.31
NSMCE1-209ENST00000565384 SRCAPQ6ZRS2 3230 aa16.95■□□□□ 0.3
NSMCE1-209ENST00000565384 SPATA31A5Q5VU36 1347 aa16.95■□□□□ 0.3
NSMCE1-209ENST00000565384 SPATA31A7Q8IWB4 1347 aa16.95■□□□□ 0.3
NSMCE1-209ENST00000565384 BAG6P46379 1132 aa16.94■□□□□ 0.3
NSMCE1-209ENST00000565384 NUDT16Q96DE0 195 aaKnown RBP16.94■□□□□ 0.3
NSMCE1-209ENST00000565384 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
NSMCE1-209ENST00000565384 THSD7AQ9UPZ6 1657 aa16.94■□□□□ 0.3
NSMCE1-209ENST00000565384 PHRF1Q9P1Y6 1649 aaKnown RBP16.93■□□□□ 0.3
NSMCE1-209ENST00000565384 HRCP23327 699 aa16.93■□□□□ 0.3
NSMCE1-209ENST00000565384 RGPD1P0DJD0 1748 aa16.92■□□□□ 0.3
NSMCE1-209ENST00000565384 LRP5O75197 1615 aa16.92■□□□□ 0.3
NSMCE1-209ENST00000565384 KIAA0232Q92628 1395 aa16.91■□□□□ 0.3
NSMCE1-209ENST00000565384 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
NSMCE1-209ENST00000565384 FAM182BQ5T319 152 aa16.9■□□□□ 0.3
NSMCE1-209ENST00000565384 CDK19Q9BWU1 502 aa16.9■□□□□ 0.3
NSMCE1-209ENST00000565384 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.3
NSMCE1-209ENST00000565384 PSDA5PKW4 1024 aaPredicted RBP16.89■□□□□ 0.29
NSMCE1-209ENST00000565384 CHRNA2Q15822 529 aa16.89■□□□□ 0.29
NSMCE1-209ENST00000565384 SPATA31A1Q5TZJ5 1347 aa16.89■□□□□ 0.29
NSMCE1-209ENST00000565384 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
NSMCE1-209ENST00000565384 EN1Q05925 392 aaPredicted RBP16.88■□□□□ 0.29
NSMCE1-209ENST00000565384 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
NSMCE1-209ENST00000565384 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
NSMCE1-209ENST00000565384 ACEP12821 1306 aa16.88■□□□□ 0.29
NSMCE1-209ENST00000565384 ZC3H6P61129 1189 aaKnown RBP16.87■□□□□ 0.29
NSMCE1-209ENST00000565384 CCDC61Q9Y6R9 512 aa16.87■□□□□ 0.29
NSMCE1-209ENST00000565384 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
NSMCE1-209ENST00000565384 DISP2A7MBM2 1401 aa16.87■□□□□ 0.29
NSMCE1-209ENST00000565384 NRKQ7Z2Y5 1582 aa16.86■□□□□ 0.29
NSMCE1-209ENST00000565384 PLEKHG3A1L390 1219 aa16.85■□□□□ 0.29
NSMCE1-209ENST00000565384 NBPF8Q3BBV2 869 aa16.85■□□□□ 0.29
NSMCE1-209ENST00000565384 SSH2Q76I76 1423 aa16.84■□□□□ 0.29
NSMCE1-209ENST00000565384 NBPF1Q3BBV0 1214 aa16.83■□□□□ 0.28
NSMCE1-209ENST00000565384 USP35Q9P2H5 1018 aa16.83■□□□□ 0.28
NSMCE1-209ENST00000565384 EVA1CP58658 441 aa16.82■□□□□ 0.28
NSMCE1-209ENST00000565384 FAM196AQ6ZSG2 479 aa16.82■□□□□ 0.28
NSMCE1-209ENST00000565384 ABTB2Q8N961 1025 aa16.82■□□□□ 0.28
NSMCE1-209ENST00000565384 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
NSMCE1-209ENST00000565384 PPIP5K1Q6PFW1 1433 aa16.81■□□□□ 0.28
NSMCE1-209ENST00000565384 CPDO75976 1380 aa16.81■□□□□ 0.28
NSMCE1-209ENST00000565384 USP19O94966 1318 aa16.81■□□□□ 0.28
NSMCE1-209ENST00000565384 TRIM37O94972 964 aa16.81■□□□□ 0.28
NSMCE1-209ENST00000565384 EZH2Q15910 746 aaKnown RBP16.81■□□□□ 0.28
NSMCE1-209ENST00000565384 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
NSMCE1-209ENST00000565384 CAMTA1Q9Y6Y1 1673 aa16.81■□□□□ 0.28
NSMCE1-209ENST00000565384 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
NSMCE1-209ENST00000565384 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
NSMCE1-209ENST00000565384 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
NSMCE1-209ENST00000565384 LARP1Q6PKG0 1096 aaKnown RBP16.79■□□□□ 0.28
NSMCE1-209ENST00000565384 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
NSMCE1-209ENST00000565384 CAMKK2Q96RR4 588 aa16.78■□□□□ 0.28
NSMCE1-209ENST00000565384 CABP2Q9NPB3 220 aa16.78■□□□□ 0.28
NSMCE1-209ENST00000565384 APBA3O96018 575 aa16.77■□□□□ 0.28
NSMCE1-209ENST00000565384 NLRP13Q86W25 1043 aa16.77■□□□□ 0.28
NSMCE1-209ENST00000565384 TCP11L2Q8N4U5 519 aa16.77■□□□□ 0.28
NSMCE1-209ENST00000565384 QRICH2Q9H0J4 1663 aa16.77■□□□□ 0.28
NSMCE1-209ENST00000565384 PARD3Q8TEW0 1356 aa16.77■□□□□ 0.27
NSMCE1-209ENST00000565384 COL5A2P05997 1499 aaPredicted RBP16.76■□□□□ 0.27
NSMCE1-209ENST00000565384 GCP02774 474 aa16.76■□□□□ 0.27
NSMCE1-209ENST00000565384 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
NSMCE1-209ENST00000565384 THRAP3Q9Y2W1 955 aaKnown RBP16.75■□□□□ 0.27
NSMCE1-209ENST00000565384 RREB1Q92766 1687 aa16.75■□□□□ 0.27
NSMCE1-209ENST00000565384 USP6P35125 1406 aa16.74■□□□□ 0.27
NSMCE1-209ENST00000565384 SLIT3O75094 1523 aa16.73■□□□□ 0.27
NSMCE1-209ENST00000565384 PARP4Q9UKK3 1724 aaKnown RBP16.73■□□□□ 0.27
NSMCE1-209ENST00000565384 CRB1P82279 1406 aa16.72■□□□□ 0.27
NSMCE1-209ENST00000565384 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
NSMCE1-209ENST00000565384 CABP1Q9NZU7 370 aa16.72■□□□□ 0.27
NSMCE1-209ENST00000565384 NUP188Q5SRE5 1749 aa16.72■□□□□ 0.27
NSMCE1-209ENST00000565384 NLRP6P59044 892 aa16.7■□□□□ 0.26
NSMCE1-209ENST00000565384 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
NSMCE1-209ENST00000565384 AATKQ6ZMQ8 1374 aa16.69■□□□□ 0.26
NSMCE1-209ENST00000565384 L3MBTL2Q969R5 705 aa16.69■□□□□ 0.26
NSMCE1-209ENST00000565384 LRRC37A3O60309 1634 aa16.68■□□□□ 0.26
NSMCE1-209ENST00000565384 TRPM1Q7Z4N2 1603 aa16.68■□□□□ 0.26
NSMCE1-209ENST00000565384 NBPF14Q5TI25 921 aa16.68■□□□□ 0.26
NSMCE1-209ENST00000565384 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
NSMCE1-209ENST00000565384 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
NSMCE1-209ENST00000565384 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
NSMCE1-209ENST00000565384 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
NSMCE1-209ENST00000565384 C11orf95C9JLR9 678 aaPredicted RBP16.67■□□□□ 0.26
NSMCE1-209ENST00000565384 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
NSMCE1-209ENST00000565384 TOM1L2Q6ZVM7 507 aa16.66■□□□□ 0.26
NSMCE1-209ENST00000565384 COL18A1P39060 1754 aa16.66■□□□□ 0.26
NSMCE1-209ENST00000565384 CPSF1Q10570 1443 aaKnown RBP16.65■□□□□ 0.26
NSMCE1-209ENST00000565384 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.26
NSMCE1-209ENST00000565384 WNK3Q9BYP7 1800 aa16.64■□□□□ 0.25
NSMCE1-209ENST00000565384 DDB1Q16531 1140 aa16.64■□□□□ 0.25
NSMCE1-209ENST00000565384 WDR17Q8IZU2 1322 aa16.64■□□□□ 0.25
NSMCE1-209ENST00000565384 SIN3AQ96ST3 1273 aa16.63■□□□□ 0.25
NSMCE1-209ENST00000565384 AXIN2Q9Y2T1 843 aa16.63■□□□□ 0.25
NSMCE1-209ENST00000565384 RGPD3A6NKT7 1758 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms