RNA–Protein interactions for RNA: ENST00000565113.5

DNAAF4-CCPG1-201, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene DNAAF4-CCPG1, Length 4,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-201ENST00000565113 COG3Q96JB2 828 aa6.55□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 EDC4Q6P2E9 1401 aaKnown RBP6.55□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 CALD1Q05682 793 aaKnown RBP6.55□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 ANKRD26Q9UPS8 1709 aa6.55□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 METP08581 1390 aa6.55□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 CD163L1Q9NR16 1453 aa6.55□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 FCHSD2O94868 740 aa6.55□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 PDE4AP27815 886 aa6.55□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 CCDC61Q9Y6R9 512 aa6.55□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 TMPOP42166 694 aaKnown RBP6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 NOP58Q9Y2X3 529 aaKnown RBP6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 IL16Q14005 1332 aa6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 ZBTB47Q9UFB7 747 aaPredicted RBP6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 PLEKHG1Q9ULL1 1385 aa6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 KIF20BQ96Q89 1820 aa6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 RARSP54136 660 aaKnown RBP6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 RIPK4P57078 832 aa6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 FTSJ3Q8IY81 847 aaKnown RBP6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 PMFBP1Q8TBY8 1022 aa6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 DMRT2Q9Y5R5 561 aa6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 TECPR2O15040 1411 aa6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 IPO9Q96P70 1041 aaKnown RBP6.54□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 KDM2BQ8NHM5 1336 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 MSH5O43196 834 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 NPM2Q86SE8 214 aaKnown RBP6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 KNDC1Q76NI1 1749 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 PLPPR3Q6T4P5 718 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 THEMISQ8N1K5 641 aaPredicted RBP6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 CLUAP1Q96AJ1 413 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 LMOD3Q0VAK6 560 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 ZKSCAN2Q63HK3 967 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 DDRGK1Q96HY6 314 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 PLEKHF1Q96S99 279 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 CPS1P31327 1500 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 PNPLA6Q8IY17 1366 aa6.53□□□□□ -1.36
DNAAF4-CCPG1-201ENST00000565113 SETD1AO15047 1707 aaKnown RBP6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 COL3A1P02461 1466 aaPredicted RBP6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 IPO8O15397 1037 aaKnown RBP6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 BACH2Q9BYV9 841 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 SMC4Q9NTJ3 1288 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 COG6Q9Y2V7 657 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 ADGRB2O60241 1585 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 TRHP20396 242 aaPredicted RBP6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 PANK1Q8TE04 598 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 POLKQ9UBT6 870 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 DAXXQ9UER7 740 aaPredicted RBP6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 NRXN3Q9Y4C0 1643 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 CPSF1Q10570 1443 aaKnown RBP6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 AATKQ6ZMQ8 1374 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 NME9Q86XW9 330 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 CDC42BPGQ6DT37 1551 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 UBR1Q8IWV7 1749 aa6.52□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 PRKAR2BP31323 418 aa6.51□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 RWDD1Q9H446 243 aaPredicted RBP6.51□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 FAM161AQ3B820 660 aa6.51□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 EXOSC9Q06265 439 aaKnown RBP6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 NFE2L2Q16236 605 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 DZIP1LQ8IYY4 767 aaKnown RBP6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 CHMP4BQ9H444 224 aaKnown RBP6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 CEBPAP49715 358 aaPredicted RBP6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 RGS3P49796 1198 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 BCL2L13Q9BXK5 485 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 LAS1LQ9Y4W2 734 aaKnown RBP6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 CDK12Q9NYV4 1490 aaPredicted RBP6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 ROBO2Q9HCK4 1378 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 TSR2Q969E8 191 aaKnown RBP6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 ZNF428Q96B54 188 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 TRIM35Q9UPQ4 493 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 KIF16BQ96L93 1317 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 TBX22Q9Y458 520 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 ADAMTS13Q76LX8 1427 aa6.5□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 LTKP29376 864 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 GNAI1P63096 354 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 SLC26A8Q96RN1 970 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 EMILIN1Q9Y6C2 1016 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 HMOX1P09601 288 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 MVPQ14764 893 aaKnown RBP6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 DDX19BQ9UMR2 479 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 AMOTL2Q9Y2J4 779 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 ALDH1L2Q3SY69 923 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 ITSN1Q15811 1721 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 PLEKHG3A1L390 1219 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 IL13P35225 146 aa6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 HAP1P54257 671 aaPredicted RBP6.49□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 ACEP12821 1306 aa6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 TTC21BQ7Z4L5 1316 aa6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 ITPRIPQ8IWB1 547 aa6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 NGDNQ8NEJ9 315 aaKnown RBP6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 IFT57Q9NWB7 429 aa6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 DIP2AQ14689 1571 aa6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 TTC21AQ8NDW8 1320 aa6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 SLIT1O75093 1534 aa6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 RRS1Q15050 365 aaKnown RBP6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 LRRC7Q96NW7 1537 aa6.48□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 NUTM2FA1L443 756 aa6.47□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 ATF7IPQ6VMQ6 1270 aa6.47□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 MON2Q7Z3U7 1717 aa6.47□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 RTL5Q5HYW3 569 aaPredicted RBP6.47□□□□□ -1.37
DNAAF4-CCPG1-201ENST00000565113 NOB1Q9ULX3 412 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms