RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 WAPLQ7Z5K2 1190 aa28.75■■■□□ 2.19
SPSB3-206ENST00000564709 VIRMAQ69YN4 1812 aaKnown RBP28.74■■■□□ 2.19
SPSB3-206ENST00000564709 TMPOP42166 694 aaKnown RBP28.74■■■□□ 2.19
SPSB3-206ENST00000564709 MAPK8IP3Q9UPT6 1336 aa28.73■■■□□ 2.19
SPSB3-206ENST00000564709 MED14O60244 1454 aa28.73■■■□□ 2.19
SPSB3-206ENST00000564709 A2ML1A8K2U0 1454 aa28.73■■■□□ 2.19
SPSB3-206ENST00000564709 PCDHB15Q9Y5E8 787 aa28.72■■■□□ 2.19
SPSB3-206ENST00000564709 TRIM35Q9UPQ4 493 aa28.71■■■□□ 2.19
SPSB3-206ENST00000564709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.71■■■□□ 2.19
SPSB3-206ENST00000564709 NEFMP07197 916 aa28.7■■■□□ 2.19
SPSB3-206ENST00000564709 NCBP3Q53F19 620 aaKnown RBP28.7■■■□□ 2.19
SPSB3-206ENST00000564709 FBLN1P23142 703 aa28.7■■■□□ 2.18
SPSB3-206ENST00000564709 RIMS2Q9UQ26 1411 aa28.69■■■□□ 2.18
SPSB3-206ENST00000564709 EXOSC9Q06265 439 aaKnown RBP28.69■■■□□ 2.18
SPSB3-206ENST00000564709 REREQ9P2R6 1566 aa28.69■■■□□ 2.18
SPSB3-206ENST00000564709 SETD1AO15047 1707 aaKnown RBP28.69■■■□□ 2.18
SPSB3-206ENST00000564709 AGLP35573 1532 aa28.69■■■□□ 2.18
SPSB3-206ENST00000564709 DIAPH1O60610 1272 aaKnown RBP28.68■■■□□ 2.18
SPSB3-206ENST00000564709 SPATA31D1Q6ZQQ2 1576 aa28.67■■■□□ 2.18
SPSB3-206ENST00000564709 PPM1GO15355 546 aaPredicted RBP28.66■■■□□ 2.18
SPSB3-206ENST00000564709 PMFBP1Q8TBY8 1022 aa28.66■■■□□ 2.18
SPSB3-206ENST00000564709 RIPK4P57078 832 aa28.65■■■□□ 2.18
SPSB3-206ENST00000564709 SMC4Q9NTJ3 1288 aa28.64■■■□□ 2.18
SPSB3-206ENST00000564709 ZKSCAN2Q63HK3 967 aa28.64■■■□□ 2.17
SPSB3-206ENST00000564709 DAXXQ9UER7 740 aaPredicted RBP28.64■■■□□ 2.17
SPSB3-206ENST00000564709 DLC1Q96QB1 1528 aa28.63■■■□□ 2.17
SPSB3-206ENST00000564709 FTSJ3Q8IY81 847 aaKnown RBP28.63■■■□□ 2.17
SPSB3-206ENST00000564709 MVPQ14764 893 aaKnown RBP28.63■■■□□ 2.17
SPSB3-206ENST00000564709 LRRC7Q96NW7 1537 aa28.62■■■□□ 2.17
SPSB3-206ENST00000564709 PNPLA6Q8IY17 1366 aa28.62■■■□□ 2.17
SPSB3-206ENST00000564709 DZIP1LQ8IYY4 767 aaKnown RBP28.61■■■□□ 2.17
SPSB3-206ENST00000564709 SEC24BO95487 1268 aa28.6■■■□□ 2.17
SPSB3-206ENST00000564709 AAMPQ13685 434 aa28.6■■■□□ 2.17
SPSB3-206ENST00000564709 SSH1Q8WYL5 1049 aa28.6■■■□□ 2.17
SPSB3-206ENST00000564709 PPP6R1Q9UPN7 881 aa28.59■■■□□ 2.17
SPSB3-206ENST00000564709 NRXN3Q9Y4C0 1643 aa28.59■■■□□ 2.17
SPSB3-206ENST00000564709 ATP7BP35670 1465 aa28.59■■■□□ 2.17
SPSB3-206ENST00000564709 PDZRN3Q9UPQ7 1066 aa28.59■■■□□ 2.17
SPSB3-206ENST00000564709 MAP2P11137 1827 aaKnown RBP28.58■■■□□ 2.17
SPSB3-206ENST00000564709 CT47B1P0C2W7 299 aaPredicted RBP28.58■■■□□ 2.17
SPSB3-206ENST00000564709 POLKQ9UBT6 870 aa28.57■■■□□ 2.16
SPSB3-206ENST00000564709 TRIM27P14373 513 aa28.57■■■□□ 2.16
SPSB3-206ENST00000564709 USP19O94966 1318 aa28.56■■■□□ 2.16
SPSB3-206ENST00000564709 METP08581 1390 aa28.55■■■□□ 2.16
SPSB3-206ENST00000564709 PRKAR2BP31323 418 aa28.55■■■□□ 2.16
SPSB3-206ENST00000564709 RWDD1Q9H446 243 aaPredicted RBP28.55■■■□□ 2.16
SPSB3-206ENST00000564709 CDC42BPGQ6DT37 1551 aa28.54■■■□□ 2.16
SPSB3-206ENST00000564709 IL16Q14005 1332 aa28.54■■■□□ 2.16
SPSB3-206ENST00000564709 PPIP5K1Q6PFW1 1433 aa28.54■■■□□ 2.16
SPSB3-206ENST00000564709 TXNDC2Q86VQ3 553 aa28.53■■■□□ 2.16
SPSB3-206ENST00000564709 HMOX1P09601 288 aa28.53■■■□□ 2.16
SPSB3-206ENST00000564709 RSPH6AQ9H0K4 717 aa28.53■■■□□ 2.16
SPSB3-206ENST00000564709 USP35Q9P2H5 1018 aa28.53■■■□□ 2.16
SPSB3-206ENST00000564709 ZRANB1Q9UGI0 708 aa28.53■■■□□ 2.16
SPSB3-206ENST00000564709 NOB1Q9ULX3 412 aaKnown RBP28.53■■■□□ 2.16
SPSB3-206ENST00000564709 NCKAP5LQ9HCH0 1330 aa28.52■■■□□ 2.16
SPSB3-206ENST00000564709 ITPRIPQ8IWB1 547 aa28.52■■■□□ 2.16
SPSB3-206ENST00000564709 PNNQ9H307 717 aaKnown RBP28.52■■■□□ 2.16
SPSB3-206ENST00000564709 NME9Q86XW9 330 aa28.52■■■□□ 2.16
SPSB3-206ENST00000564709 EMILIN1Q9Y6C2 1016 aa28.52■■■□□ 2.16
SPSB3-206ENST00000564709 FAM135BQ49AJ0 1406 aa28.51■■■□□ 2.15
SPSB3-206ENST00000564709 WASLO00401 505 aaPredicted RBP28.51■■■□□ 2.15
SPSB3-206ENST00000564709 FCHSD2O94868 740 aa28.51■■■□□ 2.15
SPSB3-206ENST00000564709 ATF7IPQ6VMQ6 1270 aa28.5■■■□□ 2.15
SPSB3-206ENST00000564709 PHACTR3Q96KR7 559 aa28.48■■■□□ 2.15
SPSB3-206ENST00000564709 ESF1Q9H501 851 aaKnown RBP28.48■■■□□ 2.15
SPSB3-206ENST00000564709 CPSF1Q10570 1443 aaKnown RBP28.47■■■□□ 2.15
SPSB3-206ENST00000564709 EDC4Q6P2E9 1401 aaKnown RBP28.47■■■□□ 2.15
SPSB3-206ENST00000564709 NFKBIBQ15653 356 aa28.47■■■□□ 2.15
SPSB3-206ENST00000564709 THUMPD2Q9BTF0 503 aaKnown RBP28.47■■■□□ 2.15
SPSB3-206ENST00000564709 ZMYM3Q14202 1370 aa28.47■■■□□ 2.15
SPSB3-206ENST00000564709 TMEM57Q8N5G2 664 aa28.46■■■□□ 2.15
SPSB3-206ENST00000564709 DDX19BQ9UMR2 479 aa28.44■■■□□ 2.14
SPSB3-206ENST00000564709 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.44■■■□□ 2.14
SPSB3-206ENST00000564709 NUDT16Q96DE0 195 aaKnown RBP28.44■■■□□ 2.14
SPSB3-206ENST00000564709 CPS1P31327 1500 aa28.44■■■□□ 2.14
SPSB3-206ENST00000564709 KIF13AQ9H1H9 1805 aa28.43■■■□□ 2.14
SPSB3-206ENST00000564709 NFE2L2Q16236 605 aa28.41■■■□□ 2.14
SPSB3-206ENST00000564709 KIF16BQ96L93 1317 aa28.41■■■□□ 2.14
SPSB3-206ENST00000564709 KNDC1Q76NI1 1749 aa28.41■■■□□ 2.14
SPSB3-206ENST00000564709 MON2Q7Z3U7 1717 aa28.41■■■□□ 2.14
SPSB3-206ENST00000564709 RRS1Q15050 365 aaKnown RBP28.41■■■□□ 2.14
SPSB3-206ENST00000564709 IL13P35225 146 aa28.4■■■□□ 2.14
SPSB3-206ENST00000564709 CDK12Q9NYV4 1490 aaPredicted RBP28.39■■■□□ 2.14
SPSB3-206ENST00000564709 ITSN1Q15811 1721 aa28.38■■■□□ 2.13
SPSB3-206ENST00000564709 COG3Q96JB2 828 aa28.37■■■□□ 2.13
SPSB3-206ENST00000564709 HDAC1Q13547 482 aaPredicted RBP28.37■■■□□ 2.13
SPSB3-206ENST00000564709 IPO8O15397 1037 aaKnown RBP28.36■■■□□ 2.13
SPSB3-206ENST00000564709 CCDC61Q9Y6R9 512 aa28.36■■■□□ 2.13
SPSB3-206ENST00000564709 AKAP12Q02952 1782 aa28.36■■■□□ 2.13
SPSB3-206ENST00000564709 ALDH1L2Q3SY69 923 aa28.36■■■□□ 2.13
SPSB3-206ENST00000564709 DLG5Q8TDM6 1919 aa28.36■■■□□ 2.13
SPSB3-206ENST00000564709 TNRQ92752 1358 aa28.35■■■□□ 2.13
SPSB3-206ENST00000564709 ZBTB40Q9NUA8 1239 aa28.35■■■□□ 2.13
SPSB3-206ENST00000564709 PRR36Q9H6K5 1346 aa28.35■■■□□ 2.13
SPSB3-206ENST00000564709 C3P01024 1663 aa28.34■■■□□ 2.13
SPSB3-206ENST00000564709 TECPR2O15040 1411 aa28.34■■■□□ 2.13
SPSB3-206ENST00000564709 TSPYL6Q8N831 410 aa28.34■■■□□ 2.13
SPSB3-206ENST00000564709 UPF2Q9HAU5 1272 aaKnown RBP28.34■■■□□ 2.13
SPSB3-206ENST00000564709 UBR1Q8IWV7 1749 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms