RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 ZC3H4Q9UPT8 1303 aaKnown RBP9.06□□□□□ -0.96
CHD9-210ENST00000564582 HMX1Q9NP08 348 aaPredicted RBP9.06□□□□□ -0.96
CHD9-210ENST00000564582 LINC01559Q495D7 138 aa9.05□□□□□ -0.96
CHD9-210ENST00000564582 ZNF511Q8NB15 262 aa9.05□□□□□ -0.96
CHD9-210ENST00000564582 BAP1Q92560 729 aa9.05□□□□□ -0.96
CHD9-210ENST00000564582 FKBPLQ9UIM3 349 aa9.05□□□□□ -0.96
CHD9-210ENST00000564582 MTMR14Q8NCE2 650 aa9.04□□□□□ -0.96
CHD9-210ENST00000564582 SNRKQ9NRH2 765 aa9.04□□□□□ -0.96
CHD9-210ENST00000564582 SH3BP2P78314 561 aa9.03□□□□□ -0.96
CHD9-210ENST00000564582 AGERQ15109 404 aa9.03□□□□□ -0.96
CHD9-210ENST00000564582 NDUFB9Q9Y6M9 179 aa9.03□□□□□ -0.96
CHD9-210ENST00000564582 WNT7AO00755 349 aa9.02□□□□□ -0.97
CHD9-210ENST00000564582 MCM6Q14566 821 aa9.02□□□□□ -0.97
CHD9-210ENST00000564582 BPHLQ86WA6 291 aaPredicted RBP9.02□□□□□ -0.97
CHD9-210ENST00000564582 EHBP1Q8NDI1 1231 aa9.02□□□□□ -0.97
CHD9-210ENST00000564582 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
CHD9-210ENST00000564582 FOXC1Q12948 553 aa9.01□□□□□ -0.97
CHD9-210ENST00000564582 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
CHD9-210ENST00000564582 PDXDC2PQ6P474 469 aa9.01□□□□□ -0.97
CHD9-210ENST00000564582 EPS8L1Q8TE68 723 aa9.01□□□□□ -0.97
CHD9-210ENST00000564582 TRIM34Q9BYJ4 488 aa9.01□□□□□ -0.97
CHD9-210ENST00000564582 VARSP26640 1264 aaKnown RBP9□□□□□ -0.97
CHD9-210ENST00000564582 SKOR1P84550 965 aa9□□□□□ -0.97
CHD9-210ENST00000564582 PRR20EP86478 221 aa9□□□□□ -0.97
CHD9-210ENST00000564582 PRR20CP86479 221 aa9□□□□□ -0.97
CHD9-210ENST00000564582 PRR20DP86480 221 aa9□□□□□ -0.97
CHD9-210ENST00000564582 PRR20BP86481 221 aa9□□□□□ -0.97
CHD9-210ENST00000564582 PRR20AP86496 221 aa9□□□□□ -0.97
CHD9-210ENST00000564582 PTK2Q05397 1052 aa9□□□□□ -0.97
CHD9-210ENST00000564582 GPSM3Q9Y4H4 160 aa9□□□□□ -0.97
CHD9-210ENST00000564582 LAPTM4AQ15012 233 aa8.99□□□□□ -0.97
CHD9-210ENST00000564582 RAD21O60216 631 aa8.98□□□□□ -0.97
CHD9-210ENST00000564582 FAM174AQ8TBP5 190 aa8.98□□□□□ -0.97
CHD9-210ENST00000564582 ARHGAP9Q9BRR9 750 aa8.98□□□□□ -0.97
CHD9-210ENST00000564582 PDZRN3Q9UPQ7 1066 aa8.98□□□□□ -0.97
CHD9-210ENST00000564582 TNFRSF10AO00220 468 aa8.97□□□□□ -0.97
CHD9-210ENST00000564582 GDF9O60383 454 aa8.97□□□□□ -0.97
CHD9-210ENST00000564582 UBTFP17480 764 aaKnown RBP8.97□□□□□ -0.97
CHD9-210ENST00000564582 CYP4X1Q8N118 509 aa8.97□□□□□ -0.97
CHD9-210ENST00000564582 FOXJ1Q92949 421 aa8.97□□□□□ -0.97
CHD9-210ENST00000564582 MRGPRX2Q96LB1 330 aa8.97□□□□□ -0.97
CHD9-210ENST00000564582 IRX2Q9BZI1 471 aaPredicted RBP8.97□□□□□ -0.97
CHD9-210ENST00000564582 PKD2L1Q9P0L9 805 aa8.97□□□□□ -0.97
CHD9-210ENST00000564582 MAGEB6P1A0A0J9YX57 407 aa8.96□□□□□ -0.98
CHD9-210ENST00000564582 SH3BP5LQ7L8J4 393 aa8.96□□□□□ -0.98
CHD9-210ENST00000564582 ZBTB33Q86T24 672 aa8.96□□□□□ -0.98
CHD9-210ENST00000564582 WWC1Q8IX03 1113 aa8.96□□□□□ -0.98
CHD9-210ENST00000564582 TTC24A2A3L6 582 aaPredicted RBP8.95□□□□□ -0.98
CHD9-210ENST00000564582 GFRA3O60609 400 aa8.95□□□□□ -0.98
CHD9-210ENST00000564582 SH3RF1Q7Z6J0 888 aa8.95□□□□□ -0.98
CHD9-210ENST00000564582 CARD14Q9BXL6 1004 aa8.95□□□□□ -0.98
CHD9-210ENST00000564582 ZNF330Q9Y3S2 320 aaPredicted RBP8.95□□□□□ -0.98
CHD9-210ENST00000564582 GTF3C3Q9Y5Q9 886 aa8.95□□□□□ -0.98
CHD9-210ENST00000564582 ZBBXA8MT70 800 aa8.94□□□□□ -0.98
CHD9-210ENST00000564582 TRIM67Q6ZTA4 783 aa8.94□□□□□ -0.98
CHD9-210ENST00000564582 SNIP1Q8TAD8 396 aaKnown RBP8.94□□□□□ -0.98
CHD9-210ENST00000564582 ZNF592Q92610 1267 aa8.94□□□□□ -0.98
CHD9-210ENST00000564582 TBC1D2BQ9UPU7 963 aa8.94□□□□□ -0.98
CHD9-210ENST00000564582 NRG2O14511 850 aaPredicted RBP8.93□□□□□ -0.98
CHD9-210ENST00000564582 ABL2P42684 1182 aa8.92□□□□□ -0.98
CHD9-210ENST00000564582 MPNDQ8N594 471 aa8.92□□□□□ -0.98
CHD9-210ENST00000564582 GDPD2Q9HCC8 539 aa8.92□□□□□ -0.98
CHD9-210ENST00000564582 CDV3Q9UKY7 258 aaKnown RBP8.92□□□□□ -0.98
CHD9-210ENST00000564582 NR1H3Q13133 447 aa8.91□□□□□ -0.98
CHD9-210ENST00000564582 ERFEQ4G0M1 354 aa8.91□□□□□ -0.98
CHD9-210ENST00000564582 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
CHD9-210ENST00000564582 TRMT44Q8IYL2 757 aaKnown RBP8.91□□□□□ -0.98
CHD9-210ENST00000564582 SLC10A4Q96EP9 437 aa8.91□□□□□ -0.98
CHD9-210ENST00000564582 C1QTNF2Q9BXJ5 285 aa8.91□□□□□ -0.98
CHD9-210ENST00000564582 TOR4AQ9NXH8 423 aa8.91□□□□□ -0.98
CHD9-210ENST00000564582 COG6Q9Y2V7 657 aa8.91□□□□□ -0.98
CHD9-210ENST00000564582 SIAH2O43255 324 aa8.9□□□□□ -0.98
CHD9-210ENST00000564582 ALDH1A1P00352 501 aa8.9□□□□□ -0.98
CHD9-210ENST00000564582 WASHC4Q2M389 1173 aa8.9□□□□□ -0.98
CHD9-210ENST00000564582 ADAM32Q8TC27 787 aa8.9□□□□□ -0.98
CHD9-210ENST00000564582 WASF2Q9Y6W5 498 aa8.9□□□□□ -0.98
CHD9-210ENST00000564582 MCCD1P59942 119 aaPredicted RBP8.89□□□□□ -0.99
CHD9-210ENST00000564582 ARID5BQ14865 1188 aa8.89□□□□□ -0.99
CHD9-210ENST00000564582 DZIP3Q86Y13 1208 aaKnown RBP8.89□□□□□ -0.99
CHD9-210ENST00000564582 TLL2Q9Y6L7 1015 aa8.89□□□□□ -0.99
CHD9-210ENST00000564582 TTBK1Q5TCY1 1321 aaPredicted RBP8.88□□□□□ -0.99
CHD9-210ENST00000564582 FBXO45P0C2W1 286 aa8.88□□□□□ -0.99
CHD9-210ENST00000564582 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
CHD9-210ENST00000564582 PKDCCQ504Y2 493 aa8.88□□□□□ -0.99
CHD9-210ENST00000564582 CDK15Q96Q40 435 aa8.88□□□□□ -0.99
CHD9-210ENST00000564582 MAP4K5Q9Y4K4 846 aa8.88□□□□□ -0.99
CHD9-210ENST00000564582 FAM187AA6NFU0 413 aa8.87□□□□□ -0.99
CHD9-210ENST00000564582 GPR37L1O60883 481 aa8.87□□□□□ -0.99
CHD9-210ENST00000564582 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.99
CHD9-210ENST00000564582 VASH1Q7L8A9 365 aaPredicted RBP8.87□□□□□ -0.99
CHD9-210ENST00000564582 DGAT1O75907 488 aa8.86□□□□□ -0.99
CHD9-210ENST00000564582 ADH1CP00326 375 aa8.86□□□□□ -0.99
CHD9-210ENST00000564582 OCSTAMPQ9BR26 566 aa8.86□□□□□ -0.99
CHD9-210ENST00000564582 PCDHB9Q9Y5E1 797 aa8.86□□□□□ -0.99
CHD9-210ENST00000564582 NR5A1Q13285 461 aa8.85□□□□□ -0.99
CHD9-210ENST00000564582 IRF5Q13568 498 aa8.85□□□□□ -0.99
CHD9-210ENST00000564582 POM121Q96HA1 1249 aa8.85□□□□□ -0.99
CHD9-210ENST00000564582 J3QL48 77 aa8.84□□□□□ -0.99
CHD9-210ENST00000564582 SMPD1P17405 629 aa8.84□□□□□ -0.99
CHD9-210ENST00000564582 FSHRP23945 695 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms