RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 L3MBTL2Q969R5 705 aa21.6■■□□□ 1.05
SPG7-210ENST00000564409 CENPJQ9HC77 1338 aaPredicted RBP21.59■■□□□ 1.05
SPG7-210ENST00000564409 ONECUT3O60422 494 aaPredicted RBP21.59■■□□□ 1.05
SPG7-210ENST00000564409 CRYBG1Q9Y4K1 1723 aa21.59■■□□□ 1.05
SPG7-210ENST00000564409 PLEKHG5O94827 1062 aa21.58■■□□□ 1.05
SPG7-210ENST00000564409 ACEP12821 1306 aa21.56■■□□□ 1.04
SPG7-210ENST00000564409 NRAPQ86VF7 1730 aa21.56■■□□□ 1.04
SPG7-210ENST00000564409 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
SPG7-210ENST00000564409 CCDC9Q9Y3X0 531 aaKnown RBP21.56■■□□□ 1.04
SPG7-210ENST00000564409 BRWD3Q6RI45 1802 aa21.56■■□□□ 1.04
SPG7-210ENST00000564409 BRD4O60885 1362 aaPredicted RBP21.55■■□□□ 1.04
SPG7-210ENST00000564409 QRICH2Q9H0J4 1663 aa21.55■■□□□ 1.04
SPG7-210ENST00000564409 TRPM1Q7Z4N2 1603 aa21.55■■□□□ 1.04
SPG7-210ENST00000564409 SRPK2P78362 688 aaKnown RBP21.54■■□□□ 1.04
SPG7-210ENST00000564409 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
SPG7-210ENST00000564409 BTG4Q9NY30 223 aa21.54■■□□□ 1.04
SPG7-210ENST00000564409 SIN3AQ96ST3 1273 aa21.53■■□□□ 1.04
SPG7-210ENST00000564409 PRDM11Q9NQV5 511 aa21.53■■□□□ 1.04
SPG7-210ENST00000564409 PHRF1Q9P1Y6 1649 aaKnown RBP21.51■■□□□ 1.03
SPG7-210ENST00000564409 BLMP54132 1417 aaPredicted RBP21.5■■□□□ 1.03
SPG7-210ENST00000564409 PPIP5K1Q6PFW1 1433 aa21.5■■□□□ 1.03
SPG7-210ENST00000564409 NEUROD1Q13562 356 aa21.5■■□□□ 1.03
SPG7-210ENST00000564409 EVC2Q86UK5 1308 aa21.49■■□□□ 1.03
SPG7-210ENST00000564409 ROCK2O75116 1388 aaKnown RBP21.48■■□□□ 1.03
SPG7-210ENST00000564409 EP400Q96L91 3159 aa21.48■■□□□ 1.03
SPG7-210ENST00000564409 KRT27Q7Z3Y8 459 aa21.48■■□□□ 1.03
SPG7-210ENST00000564409 ABTB2Q8N961 1025 aa21.48■■□□□ 1.03
SPG7-210ENST00000564409 SPATA31A5Q5VU36 1347 aa21.47■■□□□ 1.03
SPG7-210ENST00000564409 SPATA31A7Q8IWB4 1347 aa21.47■■□□□ 1.03
SPG7-210ENST00000564409 KIAA0232Q92628 1395 aa21.47■■□□□ 1.03
SPG7-210ENST00000564409 NLRP13Q86W25 1043 aa21.46■■□□□ 1.03
SPG7-210ENST00000564409 CABP2Q9NPB3 220 aa21.46■■□□□ 1.03
SPG7-210ENST00000564409 SF3B2Q13435 895 aaKnown RBP21.45■■□□□ 1.02
SPG7-210ENST00000564409 USP19O94966 1318 aa21.45■■□□□ 1.02
SPG7-210ENST00000564409 FAM98CQ17RN3 349 aaKnown RBP21.44■■□□□ 1.02
SPG7-210ENST00000564409 ZRANB1Q9UGI0 708 aa21.44■■□□□ 1.02
SPG7-210ENST00000564409 CPDO75976 1380 aa21.44■■□□□ 1.02
SPG7-210ENST00000564409 A0A0G2JS52 829 aa21.43■■□□□ 1.02
SPG7-210ENST00000564409 MYT1Q01538 1121 aa21.43■■□□□ 1.02
SPG7-210ENST00000564409 NUTM2GQ5VZR2 741 aa21.43■■□□□ 1.02
SPG7-210ENST00000564409 CABP1Q9NZU7 370 aa21.42■■□□□ 1.02
SPG7-210ENST00000564409 NRKQ7Z2Y5 1582 aa21.41■■□□□ 1.02
SPG7-210ENST00000564409 USP6P35125 1406 aa21.41■■□□□ 1.02
SPG7-210ENST00000564409 ZC3H6P61129 1189 aaKnown RBP21.41■■□□□ 1.02
SPG7-210ENST00000564409 ZNF692Q9BU19 519 aaPredicted RBP21.41■■□□□ 1.02
SPG7-210ENST00000564409 SPATA31A1Q5TZJ5 1347 aa21.4■■□□□ 1.02
SPG7-210ENST00000564409 THSD7AQ9UPZ6 1657 aa21.4■■□□□ 1.02
SPG7-210ENST00000564409 SBNO2Q9Y2G9 1366 aa21.39■■□□□ 1.02
SPG7-210ENST00000564409 GCP02774 474 aa21.39■■□□□ 1.01
SPG7-210ENST00000564409 CHRNA2Q15822 529 aa21.39■■□□□ 1.01
SPG7-210ENST00000564409 EVA1CP58658 441 aa21.38■■□□□ 1.01
SPG7-210ENST00000564409 LMO7Q8WWI1 1683 aa21.37■■□□□ 1.01
SPG7-210ENST00000564409 STRN4Q9NRL3 753 aa21.36■■□□□ 1.01
SPG7-210ENST00000564409 SSH2Q76I76 1423 aa21.36■■□□□ 1.01
SPG7-210ENST00000564409 TONSLQ96HA7 1378 aa21.36■■□□□ 1.01
SPG7-210ENST00000564409 CAMTA1Q9Y6Y1 1673 aa21.35■■□□□ 1.01
SPG7-210ENST00000564409 NLRP6P59044 892 aa21.35■■□□□ 1.01
SPG7-210ENST00000564409 BARGINQ6ZT62 677 aa21.35■■□□□ 1.01
SPG7-210ENST00000564409 AKAP12Q02952 1782 aa21.35■■□□□ 1.01
SPG7-210ENST00000564409 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
SPG7-210ENST00000564409 RGPD1P0DJD0 1748 aa21.34■■□□□ 1.01
SPG7-210ENST00000564409 SLIT3O75094 1523 aa21.34■■□□□ 1.01
SPG7-210ENST00000564409 BAG6P46379 1132 aa21.33■■□□□ 1.01
SPG7-210ENST00000564409 CARD11Q9BXL7 1154 aa21.33■■□□□ 1.01
SPG7-210ENST00000564409 THRAP3Q9Y2W1 955 aaKnown RBP21.33■■□□□ 1.01
SPG7-210ENST00000564409 TTC21AQ8NDW8 1320 aa21.32■■□□□ 1
SPG7-210ENST00000564409 PIK3C2AO00443 1686 aa21.31■■□□□ 1
SPG7-210ENST00000564409 DEFB132Q7Z7B7 95 aa21.31■■□□□ 1
SPG7-210ENST00000564409 AATKQ6ZMQ8 1374 aa21.31■■□□□ 1
SPG7-210ENST00000564409 CPSF1Q10570 1443 aaKnown RBP21.3■■□□□ 1
SPG7-210ENST00000564409 FAM196AQ6ZSG2 479 aa21.3■■□□□ 1
SPG7-210ENST00000564409 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
SPG7-210ENST00000564409 TTC21BQ7Z4L5 1316 aa21.29■■□□□ 1
SPG7-210ENST00000564409 COL5A2P05997 1499 aaPredicted RBP21.29■■□□□ 1
SPG7-210ENST00000564409 LARP1Q6PKG0 1096 aaKnown RBP21.29■■□□□ 1
SPG7-210ENST00000564409 KCNH5Q8NCM2 988 aa21.29■■□□□ 1
SPG7-210ENST00000564409 SLC24A1O60721 1099 aa21.28■■□□□ 1
SPG7-210ENST00000564409 PUS7Q96PZ0 661 aaKnown RBP21.28■■□□□ 1
SPG7-210ENST00000564409 KTN1Q86UP2 1357 aaKnown RBP21.27■■□□□ 1
SPG7-210ENST00000564409 C11orf95C9JLR9 678 aaPredicted RBP21.27■■□□□ 1
SPG7-210ENST00000564409 USP35Q9P2H5 1018 aa21.27■■□□□ 1
SPG7-210ENST00000564409 DISP2A7MBM2 1401 aa21.27■■□□□ 1
SPG7-210ENST00000564409 PDE3BQ13370 1112 aa21.26■□□□□ 0.99
SPG7-210ENST00000564409 CRB1P82279 1406 aa21.26■□□□□ 0.99
SPG7-210ENST00000564409 MON2Q7Z3U7 1717 aa21.26■□□□□ 0.99
SPG7-210ENST00000564409 COL18A1P39060 1754 aa21.25■□□□□ 0.99
SPG7-210ENST00000564409 PARP4Q9UKK3 1724 aaKnown RBP21.24■□□□□ 0.99
SPG7-210ENST00000564409 TNS1Q9HBL0 1735 aaKnown RBP21.24■□□□□ 0.99
SPG7-210ENST00000564409 FAM182BQ5T319 152 aa21.23■□□□□ 0.99
SPG7-210ENST00000564409 ARHGEF25Q86VW2 580 aa21.23■□□□□ 0.99
SPG7-210ENST00000564409 ABCC6O95255 1503 aa21.21■□□□□ 0.99
SPG7-210ENST00000564409 USP54Q70EL1 1684 aa21.21■□□□□ 0.99
SPG7-210ENST00000564409 ZBTB7CA1YPR0 619 aa21.2■□□□□ 0.98
SPG7-210ENST00000564409 HDGFL2Q7Z4V5 671 aaPredicted RBP21.2■□□□□ 0.98
SPG7-210ENST00000564409 TERF2IPQ9NYB0 399 aa21.2■□□□□ 0.98
SPG7-210ENST00000564409 USP31Q70CQ4 1352 aa21.2■□□□□ 0.98
SPG7-210ENST00000564409 PARD3Q8TEW0 1356 aa21.2■□□□□ 0.98
SPG7-210ENST00000564409 CDCA7Q9BWT1 371 aaPredicted RBP21.19■□□□□ 0.98
SPG7-210ENST00000564409 WDR17Q8IZU2 1322 aa21.19■□□□□ 0.98
SPG7-210ENST00000564409 EN1Q05925 392 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms