RNA–Protein interactions for RNA: ENST00000564336.1

NKD1-202, Transcript of naked cuticle homolog 1, humanhuman

TSL 3

Gene NKD1, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKD1-202ENST00000564336 GJD4Q96KN9 370 aaPredicted RBP32.43■■■□□ 2.78
NKD1-202ENST00000564336 CABP2Q9NPB3 220 aa32.43■■■□□ 2.78
NKD1-202ENST00000564336 PAK3O75914 559 aaPredicted RBP32.4■■■□□ 2.78
NKD1-202ENST00000564336 HAP1P54257 671 aaPredicted RBP32.4■■■□□ 2.78
NKD1-202ENST00000564336 GLI3P10071 1580 aa32.4■■■□□ 2.78
NKD1-202ENST00000564336 ROCK2O75116 1388 aaKnown RBP32.39■■■□□ 2.78
NKD1-202ENST00000564336 PLCH1Q4KWH8 1693 aa32.39■■■□□ 2.78
NKD1-202ENST00000564336 RALGAPBQ86X10 1494 aa32.37■■■□□ 2.77
NKD1-202ENST00000564336 SRPK2P78362 688 aaKnown RBP32.37■■■□□ 2.77
NKD1-202ENST00000564336 NWD2Q9ULI1 1742 aa32.35■■■□□ 2.77
NKD1-202ENST00000564336 PPIP5K1Q6PFW1 1433 aa32.34■■■□□ 2.77
NKD1-202ENST00000564336 EP400Q96L91 3159 aa32.33■■■□□ 2.77
NKD1-202ENST00000564336 VPS72Q15906 364 aa32.32■■■□□ 2.76
NKD1-202ENST00000564336 NUTM2GQ5VZR2 741 aa32.31■■■□□ 2.76
NKD1-202ENST00000564336 CABP1Q9NZU7 370 aa32.3■■■□□ 2.76
NKD1-202ENST00000564336 NRAPQ86VF7 1730 aa32.29■■■□□ 2.76
NKD1-202ENST00000564336 BTG4Q9NY30 223 aa32.27■■■□□ 2.76
NKD1-202ENST00000564336 COL14A1Q05707 1796 aaKnown RBP32.27■■■□□ 2.76
NKD1-202ENST00000564336 TONSLQ96HA7 1378 aa32.26■■■□□ 2.75
NKD1-202ENST00000564336 PHRF1Q9P1Y6 1649 aaKnown RBP32.26■■■□□ 2.75
NKD1-202ENST00000564336 EVC2Q86UK5 1308 aa32.26■■■□□ 2.75
NKD1-202ENST00000564336 ONECUT3O60422 494 aaPredicted RBP32.25■■■□□ 2.75
NKD1-202ENST00000564336 BRWD3Q6RI45 1802 aa32.23■■■□□ 2.75
NKD1-202ENST00000564336 ATAD2Q6PL18 1390 aa32.22■■■□□ 2.75
NKD1-202ENST00000564336 KIAA0232Q92628 1395 aa32.22■■■□□ 2.75
NKD1-202ENST00000564336 SSH2Q76I76 1423 aa32.22■■■□□ 2.75
NKD1-202ENST00000564336 ABTB2Q8N961 1025 aa32.21■■■□□ 2.75
NKD1-202ENST00000564336 CARD11Q9BXL7 1154 aa32.21■■■□□ 2.75
NKD1-202ENST00000564336 USP19O94966 1318 aa32.2■■■□□ 2.74
NKD1-202ENST00000564336 USP6P35125 1406 aa32.19■■■□□ 2.74
NKD1-202ENST00000564336 ZC3H6P61129 1189 aaKnown RBP32.19■■■□□ 2.74
NKD1-202ENST00000564336 CHRNA2Q15822 529 aa32.19■■■□□ 2.74
NKD1-202ENST00000564336 SEPT12Q8IYM1 358 aa32.19■■■□□ 2.74
NKD1-202ENST00000564336 PRDM11Q9NQV5 511 aa32.19■■■□□ 2.74
NKD1-202ENST00000564336 SBNO2Q9Y2G9 1366 aa32.17■■■□□ 2.74
NKD1-202ENST00000564336 NRKQ7Z2Y5 1582 aa32.16■■■□□ 2.74
NKD1-202ENST00000564336 CCDC9Q9Y3X0 531 aaKnown RBP32.16■■■□□ 2.74
NKD1-202ENST00000564336 BRD4O60885 1362 aaPredicted RBP32.14■■■□□ 2.74
NKD1-202ENST00000564336 SPATA31A5Q5VU36 1347 aa32.13■■■□□ 2.73
NKD1-202ENST00000564336 SPATA31A7Q8IWB4 1347 aa32.13■■■□□ 2.73
NKD1-202ENST00000564336 GCP02774 474 aa32.11■■■□□ 2.73
NKD1-202ENST00000564336 NLRP13Q86W25 1043 aa32.11■■■□□ 2.73
NKD1-202ENST00000564336 CPSF1Q10570 1443 aaKnown RBP32.1■■■□□ 2.73
NKD1-202ENST00000564336 CPDO75976 1380 aa32.1■■■□□ 2.73
NKD1-202ENST00000564336 AKAP12Q02952 1782 aa32.1■■■□□ 2.73
NKD1-202ENST00000564336 FAM98CQ17RN3 349 aaKnown RBP32.1■■■□□ 2.73
NKD1-202ENST00000564336 CAMTA1Q9Y6Y1 1673 aa32.09■■■□□ 2.73
NKD1-202ENST00000564336 PIK3C2AO00443 1686 aa32.08■■■□□ 2.73
NKD1-202ENST00000564336 LMO7Q8WWI1 1683 aa32.07■■■□□ 2.72
NKD1-202ENST00000564336 TTC21BQ7Z4L5 1316 aa32.06■■■□□ 2.72
NKD1-202ENST00000564336 NLRP6P59044 892 aa32.05■■■□□ 2.72
NKD1-202ENST00000564336 TESK2Q96S53 571 aa32.05■■■□□ 2.72
NKD1-202ENST00000564336 ZNF692Q9BU19 519 aaPredicted RBP32.05■■■□□ 2.72
NKD1-202ENST00000564336 SLIT3O75094 1523 aa32.05■■■□□ 2.72
NKD1-202ENST00000564336 CD163L1Q9NR16 1453 aa32.04■■■□□ 2.72
NKD1-202ENST00000564336 SPATA31A1Q5TZJ5 1347 aa32.04■■■□□ 2.72
NKD1-202ENST00000564336 KRT27Q7Z3Y8 459 aa32.03■■■□□ 2.72
NKD1-202ENST00000564336 STRN4Q9NRL3 753 aa32.03■■■□□ 2.72
NKD1-202ENST00000564336 THSD7AQ9UPZ6 1657 aa32.02■■■□□ 2.72
NKD1-202ENST00000564336 ST20-MTHFSA0A0A6YYL1 179 aa32.01■■■□□ 2.71
NKD1-202ENST00000564336 LARP1Q6PKG0 1096 aaKnown RBP31.99■■■□□ 2.71
NKD1-202ENST00000564336 CCDC125Q86Z20 511 aa31.99■■■□□ 2.71
NKD1-202ENST00000564336 SLC12A5Q9H2X9 1139 aa31.99■■■□□ 2.71
NKD1-202ENST00000564336 MON2Q7Z3U7 1717 aa31.97■■■□□ 2.71
NKD1-202ENST00000564336 KTN1Q86UP2 1357 aaKnown RBP31.97■■■□□ 2.71
NKD1-202ENST00000564336 COL18A1P39060 1754 aa31.97■■■□□ 2.71
NKD1-202ENST00000564336 ZRANB1Q9UGI0 708 aa31.97■■■□□ 2.71
NKD1-202ENST00000564336 PCGF6Q9BYE7 350 aa31.96■■■□□ 2.71
NKD1-202ENST00000564336 FAM182BQ5T319 152 aa31.95■■■□□ 2.71
NKD1-202ENST00000564336 TTC21AQ8NDW8 1320 aa31.95■■■□□ 2.7
NKD1-202ENST00000564336 BLMP54132 1417 aaPredicted RBP31.94■■■□□ 2.7
NKD1-202ENST00000564336 A0A0G2JS52 829 aa31.94■■■□□ 2.7
NKD1-202ENST00000564336 EVA1CP58658 441 aa31.94■■■□□ 2.7
NKD1-202ENST00000564336 MYT1Q01538 1121 aa31.94■■■□□ 2.7
NKD1-202ENST00000564336 PUS7Q96PZ0 661 aaKnown RBP31.94■■■□□ 2.7
NKD1-202ENST00000564336 AATKQ6ZMQ8 1374 aa31.93■■■□□ 2.7
NKD1-202ENST00000564336 COL5A2P05997 1499 aaPredicted RBP31.92■■■□□ 2.7
NKD1-202ENST00000564336 AXIN2Q9Y2T1 843 aa31.92■■■□□ 2.7
NKD1-202ENST00000564336 DEFB132Q7Z7B7 95 aa31.91■■■□□ 2.7
NKD1-202ENST00000564336 TMC1Q8TDI8 760 aa31.91■■■□□ 2.7
NKD1-202ENST00000564336 USP35Q9P2H5 1018 aa31.91■■■□□ 2.7
NKD1-202ENST00000564336 ARHGEF25Q86VW2 580 aa31.9■■■□□ 2.7
NKD1-202ENST00000564336 BARGINQ6ZT62 677 aa31.89■■■□□ 2.7
NKD1-202ENST00000564336 ZBTB7CA1YPR0 619 aa31.88■■■□□ 2.69
NKD1-202ENST00000564336 NME9Q86XW9 330 aa31.88■■■□□ 2.69
NKD1-202ENST00000564336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.88■■■□□ 2.699e-8■■□□□ 11.7
NKD1-202ENST00000564336 NFAT5O94916 1531 aa31.88■■■□□ 2.69
NKD1-202ENST00000564336 USP31Q70CQ4 1352 aa31.87■■■□□ 2.69
NKD1-202ENST00000564336 A0A1W2PP64 1363 aa31.85■■■□□ 2.69
NKD1-202ENST00000564336 CLSPNQ9HAW4 1339 aa31.85■■■□□ 2.69
NKD1-202ENST00000564336 TCP11L2Q8N4U5 519 aa31.85■■■□□ 2.69
NKD1-202ENST00000564336 RGPD5Q99666 1765 aa31.84■■■□□ 2.69
NKD1-202ENST00000564336 USP47Q96K76 1375 aa31.84■■■□□ 2.69
NKD1-202ENST00000564336 SOX12O15370 315 aa31.84■■■□□ 2.69
NKD1-202ENST00000564336 USP54Q70EL1 1684 aa31.83■■■□□ 2.69
NKD1-202ENST00000564336 KCNH5Q8NCM2 988 aa31.83■■■□□ 2.69
NKD1-202ENST00000564336 TIMELESSQ9UNS1 1208 aa31.83■■■□□ 2.69
NKD1-202ENST00000564336 SRCAPQ6ZRS2 3230 aa31.81■■■□□ 2.68
NKD1-202ENST00000564336 HDGFL2Q7Z4V5 671 aaPredicted RBP31.8■■■□□ 2.68
NKD1-202ENST00000564336 CRB1P82279 1406 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms