RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 PPIP5K1Q6PFW1 1433 aa22.71■■□□□ 1.23
SPSB3-205ENST00000564070 BCL9LQ86UU0 1499 aa22.71■■□□□ 1.23
SPSB3-205ENST00000564070 ALS2Q96Q42 1657 aa22.7■■□□□ 1.22
SPSB3-205ENST00000564070 ACEP12821 1306 aa22.68■■□□□ 1.22
SPSB3-205ENST00000564070 CABLES1Q8TDN4 633 aa22.68■■□□□ 1.22
SPSB3-205ENST00000564070 MARF1Q9Y4F3 1742 aaKnown RBP22.67■■□□□ 1.22
SPSB3-205ENST00000564070 LMOD2Q6P5Q4 547 aa22.66■■□□□ 1.22
SPSB3-205ENST00000564070 EP400Q96L91 3159 aa22.66■■□□□ 1.22
SPSB3-205ENST00000564070 ABCA3Q99758 1704 aa22.65■■□□□ 1.22
SPSB3-205ENST00000564070 ATAD2Q6PL18 1390 aa22.65■■□□□ 1.22
SPSB3-205ENST00000564070 PAK3O75914 559 aaPredicted RBP22.63■■□□□ 1.21
SPSB3-205ENST00000564070 GJD4Q96KN9 370 aaPredicted RBP22.62■■□□□ 1.21
SPSB3-205ENST00000564070 CABP1Q9NZU7 370 aa22.62■■□□□ 1.21
SPSB3-205ENST00000564070 BRD4O60885 1362 aaPredicted RBP22.62■■□□□ 1.21
SPSB3-205ENST00000564070 USP47Q96K76 1375 aa22.62■■□□□ 1.21
SPSB3-205ENST00000564070 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
SPSB3-205ENST00000564070 SLC24A1O60721 1099 aa22.61■■□□□ 1.21
SPSB3-205ENST00000564070 HAP1P54257 671 aaPredicted RBP22.61■■□□□ 1.21
SPSB3-205ENST00000564070 UNC5CLQ8IV45 518 aa22.6■■□□□ 1.21
SPSB3-205ENST00000564070 SLIT2O94813 1529 aa22.6■■□□□ 1.21
SPSB3-205ENST00000564070 TESK2Q96S53 571 aa22.59■■□□□ 1.21
SPSB3-205ENST00000564070 CRYBG1Q9Y4K1 1723 aa22.59■■□□□ 1.21
SPSB3-205ENST00000564070 USP6P35125 1406 aa22.58■■□□□ 1.21
SPSB3-205ENST00000564070 PUS7Q96PZ0 661 aaKnown RBP22.57■■□□□ 1.2
SPSB3-205ENST00000564070 AKAP12Q02952 1782 aa22.56■■□□□ 1.2
SPSB3-205ENST00000564070 GLI3P10071 1580 aa22.56■■□□□ 1.2
SPSB3-205ENST00000564070 SRCAPQ6ZRS2 3230 aa22.55■■□□□ 1.2
SPSB3-205ENST00000564070 PHRF1Q9P1Y6 1649 aaKnown RBP22.54■■□□□ 1.2
SPSB3-205ENST00000564070 ZNF692Q9BU19 519 aaPredicted RBP22.54■■□□□ 1.2
SPSB3-205ENST00000564070 CPSF1Q10570 1443 aaKnown RBP22.54■■□□□ 1.2
SPSB3-205ENST00000564070 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.54■■□□□ 1.2
SPSB3-205ENST00000564070 FAM83GA6ND36 823 aa22.53■■□□□ 1.2
SPSB3-205ENST00000564070 SSH2Q76I76 1423 aa22.53■■□□□ 1.2
SPSB3-205ENST00000564070 ABTB2Q8N961 1025 aa22.52■■□□□ 1.2
SPSB3-205ENST00000564070 PLCH1Q4KWH8 1693 aa22.52■■□□□ 1.2
SPSB3-205ENST00000564070 NRKQ7Z2Y5 1582 aa22.51■■□□□ 1.19
SPSB3-205ENST00000564070 NWD2Q9ULI1 1742 aa22.51■■□□□ 1.19
SPSB3-205ENST00000564070 MON2Q7Z3U7 1717 aa22.5■■□□□ 1.19
SPSB3-205ENST00000564070 NINLQ9Y2I6 1382 aa22.5■■□□□ 1.19
SPSB3-205ENST00000564070 CD163L1Q9NR16 1453 aa22.49■■□□□ 1.19
SPSB3-205ENST00000564070 COL14A1Q05707 1796 aaKnown RBP22.49■■□□□ 1.19
SPSB3-205ENST00000564070 TMF1P82094 1093 aa22.49■■□□□ 1.19
SPSB3-205ENST00000564070 NUTM2GQ5VZR2 741 aa22.49■■□□□ 1.19
SPSB3-205ENST00000564070 USP19O94966 1318 aa22.49■■□□□ 1.19
SPSB3-205ENST00000564070 KTN1Q86UP2 1357 aaKnown RBP22.49■■□□□ 1.19
SPSB3-205ENST00000564070 VPS72Q15906 364 aa22.48■■□□□ 1.19
SPSB3-205ENST00000564070 NLRP13Q86W25 1043 aa22.48■■□□□ 1.19
SPSB3-205ENST00000564070 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
SPSB3-205ENST00000564070 PIK3C2AO00443 1686 aa22.48■■□□□ 1.19
SPSB3-205ENST00000564070 SEPT12Q8IYM1 358 aa22.47■■□□□ 1.19
SPSB3-205ENST00000564070 CCDC9Q9Y3X0 531 aaKnown RBP22.47■■□□□ 1.19
SPSB3-205ENST00000564070 TTC21AQ8NDW8 1320 aa22.47■■□□□ 1.19
SPSB3-205ENST00000564070 BRWD3Q6RI45 1802 aa22.46■■□□□ 1.19
SPSB3-205ENST00000564070 TTC21BQ7Z4L5 1316 aa22.46■■□□□ 1.19
SPSB3-205ENST00000564070 HDGFL2Q7Z4V5 671 aaPredicted RBP22.45■■□□□ 1.18
SPSB3-205ENST00000564070 SLC12A5Q9H2X9 1139 aa22.45■■□□□ 1.18
SPSB3-205ENST00000564070 CDCA8Q53HL2 280 aa22.44■■□□□ 1.18
SPSB3-205ENST00000564070 TERF2IPQ9NYB0 399 aa22.44■■□□□ 1.18
SPSB3-205ENST00000564070 NRAPQ86VF7 1730 aa22.43■■□□□ 1.18
SPSB3-205ENST00000564070 SLIT3O75094 1523 aa22.43■■□□□ 1.18
SPSB3-205ENST00000564070 KIAA0232Q92628 1395 aa22.43■■□□□ 1.18
SPSB3-205ENST00000564070 NLRP6P59044 892 aa22.43■■□□□ 1.18
SPSB3-205ENST00000564070 PRDM11Q9NQV5 511 aa22.43■■□□□ 1.18
SPSB3-205ENST00000564070 BTG4Q9NY30 223 aa22.43■■□□□ 1.18
SPSB3-205ENST00000564070 A0A1W2PP64 1363 aa22.42■■□□□ 1.18
SPSB3-205ENST00000564070 EDC4Q6P2E9 1401 aaKnown RBP22.41■■□□□ 1.18
SPSB3-205ENST00000564070 CPDO75976 1380 aa22.41■■□□□ 1.18
SPSB3-205ENST00000564070 ONECUT3O60422 494 aaPredicted RBP22.41■■□□□ 1.18
SPSB3-205ENST00000564070 EIF4G2P78344 907 aaKnown RBP eCLIP22.41■■□□□ 1.18
SPSB3-205ENST00000564070 GCP02774 474 aa22.4■■□□□ 1.18
SPSB3-205ENST00000564070 ZC3H6P61129 1189 aaKnown RBP22.39■■□□□ 1.17
SPSB3-205ENST00000564070 CCDC125Q86Z20 511 aa22.39■■□□□ 1.17
SPSB3-205ENST00000564070 USP54Q70EL1 1684 aa22.39■■□□□ 1.17
SPSB3-205ENST00000564070 FAM98CQ17RN3 349 aaKnown RBP22.38■■□□□ 1.17
SPSB3-205ENST00000564070 DEFB132Q7Z7B7 95 aa22.38■■□□□ 1.17
SPSB3-205ENST00000564070 ANKRD36BQ8N2N9 1353 aa22.38■■□□□ 1.17
SPSB3-205ENST00000564070 A0A0G2JS52 829 aa22.36■■□□□ 1.17
SPSB3-205ENST00000564070 HSPA5P11021 654 aaKnown RBP22.36■■□□□ 1.17
SPSB3-205ENST00000564070 MYT1Q01538 1121 aa22.36■■□□□ 1.17
SPSB3-205ENST00000564070 KRT27Q7Z3Y8 459 aa22.36■■□□□ 1.17
SPSB3-205ENST00000564070 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.17
SPSB3-205ENST00000564070 USP31Q70CQ4 1352 aa22.36■■□□□ 1.17
SPSB3-205ENST00000564070 LMO7Q8WWI1 1683 aa22.36■■□□□ 1.17
SPSB3-205ENST00000564070 BLMP54132 1417 aaPredicted RBP22.35■■□□□ 1.17
SPSB3-205ENST00000564070 CHRNA2Q15822 529 aa22.35■■□□□ 1.17
SPSB3-205ENST00000564070 ZRANB1Q9UGI0 708 aa22.35■■□□□ 1.17
SPSB3-205ENST00000564070 MYOM1P52179 1685 aa22.34■■□□□ 1.17
SPSB3-205ENST00000564070 KCNH5Q8NCM2 988 aa22.34■■□□□ 1.17
SPSB3-205ENST00000564070 FAM182BQ5T319 152 aa22.33■■□□□ 1.17
SPSB3-205ENST00000564070 NME9Q86XW9 330 aa22.32■■□□□ 1.16
SPSB3-205ENST00000564070 SPATA31A5Q5VU36 1347 aa22.31■■□□□ 1.16
SPSB3-205ENST00000564070 SPATA31A7Q8IWB4 1347 aa22.31■■□□□ 1.16
SPSB3-205ENST00000564070 NFAT5O94916 1531 aa22.31■■□□□ 1.16
SPSB3-205ENST00000564070 CAMTA1Q9Y6Y1 1673 aa22.31■■□□□ 1.16
SPSB3-205ENST00000564070 AATKQ6ZMQ8 1374 aa22.3■■□□□ 1.16
SPSB3-205ENST00000564070 OVOS2A0A0J9YW53 1432 aa22.3■■□□□ 1.16
SPSB3-205ENST00000564070 OVOS2Q6IE36 1432 aa22.3■■□□□ 1.16
SPSB3-205ENST00000564070 STRN4Q9NRL3 753 aa22.28■■□□□ 1.16
SPSB3-205ENST00000564070 ARHGEF25Q86VW2 580 aa22.27■■□□□ 1.16
SPSB3-205ENST00000564070 COL18A1P39060 1754 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms