RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
SPG7-209ENST00000564047 ESCO1Q5FWF5 840 aa17.68■□□□□ 0.42
SPG7-209ENST00000564047 PHF8Q9UPP1 1060 aa17.68■□□□□ 0.42
SPG7-209ENST00000564047 KNSTRNQ9Y448 316 aa17.68■□□□□ 0.42
SPG7-209ENST00000564047 ACEP12821 1306 aa17.68■□□□□ 0.42
SPG7-209ENST00000564047 EP400Q96L91 3159 aa17.67■□□□□ 0.42
SPG7-209ENST00000564047 RGS12O14924 1447 aa17.67■□□□□ 0.42
SPG7-209ENST00000564047 BRINP3Q76B58 766 aa17.67■□□□□ 0.42
SPG7-209ENST00000564047 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
SPG7-209ENST00000564047 NSD3Q9BZ95 1437 aa17.66■□□□□ 0.42
SPG7-209ENST00000564047 NGDNQ8NEJ9 315 aaKnown RBP17.66■□□□□ 0.42
SPG7-209ENST00000564047 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
SPG7-209ENST00000564047 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
SPG7-209ENST00000564047 ORAI2Q96SN7 254 aa17.65■□□□□ 0.42
SPG7-209ENST00000564047 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
SPG7-209ENST00000564047 NPC1L1Q9UHC9 1359 aa17.64■□□□□ 0.41
SPG7-209ENST00000564047 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.41
SPG7-209ENST00000564047 RGPD8O14715 1765 aaPredicted RBP17.63■□□□□ 0.41
SPG7-209ENST00000564047 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
SPG7-209ENST00000564047 LRRC59Q96AG4 307 aaKnown RBP17.63■□□□□ 0.41
SPG7-209ENST00000564047 USP6P35125 1406 aa17.63■□□□□ 0.41
SPG7-209ENST00000564047 ANP32CO43423 234 aa17.62■□□□□ 0.41
SPG7-209ENST00000564047 NGLY1Q96IV0 654 aa17.62■□□□□ 0.41
SPG7-209ENST00000564047 ZRANB1Q9UGI0 708 aa17.62■□□□□ 0.41
SPG7-209ENST00000564047 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
SPG7-209ENST00000564047 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
SPG7-209ENST00000564047 NHSL1Q5SYE7 1610 aa17.61■□□□□ 0.41
SPG7-209ENST00000564047 KIF1AQ12756 1690 aa17.61■□□□□ 0.41
SPG7-209ENST00000564047 AKAP12Q02952 1782 aa17.61■□□□□ 0.41
SPG7-209ENST00000564047 SSH2Q76I76 1423 aa17.61■□□□□ 0.41
SPG7-209ENST00000564047 NSD2O96028 1365 aa17.6■□□□□ 0.41
SPG7-209ENST00000564047 MON2Q7Z3U7 1717 aa17.6■□□□□ 0.41
SPG7-209ENST00000564047 PSME1Q06323 249 aa17.59■□□□□ 0.41
SPG7-209ENST00000564047 TTC21BQ7Z4L5 1316 aa17.58■□□□□ 0.4
SPG7-209ENST00000564047 TTC21AQ8NDW8 1320 aa17.58■□□□□ 0.4
SPG7-209ENST00000564047 FOXO3O43524 673 aa17.58■□□□□ 0.4
SPG7-209ENST00000564047 CC2D1BQ5T0F9 858 aaKnown RBP17.58■□□□□ 0.4
SPG7-209ENST00000564047 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.4
SPG7-209ENST00000564047 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
SPG7-209ENST00000564047 FYB1O15117 783 aa17.57■□□□□ 0.4
SPG7-209ENST00000564047 RALBP1Q15311 655 aa17.57■□□□□ 0.4
SPG7-209ENST00000564047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.57■□□□□ 0.4
SPG7-209ENST00000564047 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
SPG7-209ENST00000564047 PNPLA6Q8IY17 1366 aa17.55■□□□□ 0.4
SPG7-209ENST00000564047 PARD3Q8TEW0 1356 aa17.55■□□□□ 0.4
SPG7-209ENST00000564047 KRT28Q7Z3Y7 464 aa17.55■□□□□ 0.4
SPG7-209ENST00000564047 MIER1Q8N108 512 aa17.54■□□□□ 0.4
SPG7-209ENST00000564047 ADAMTS2O95450 1211 aa17.53■□□□□ 0.4
SPG7-209ENST00000564047 CNGB1Q14028 1251 aaPredicted RBP17.53■□□□□ 0.4
SPG7-209ENST00000564047 NME9Q86XW9 330 aa17.53■□□□□ 0.4
SPG7-209ENST00000564047 GGNBP2Q9H3C7 697 aa17.53■□□□□ 0.4
SPG7-209ENST00000564047 MORC1Q86VD1 984 aa17.52■□□□□ 0.4
SPG7-209ENST00000564047 SBNO1A3KN83 1393 aa17.52■□□□□ 0.39
SPG7-209ENST00000564047 PAK3O75914 559 aaPredicted RBP17.51■□□□□ 0.39
SPG7-209ENST00000564047 CCDC125Q86Z20 511 aa17.51■□□□□ 0.39
SPG7-209ENST00000564047 USP21Q9UK80 565 aa17.51■□□□□ 0.39
SPG7-209ENST00000564047 TRPC5Q9UL62 973 aaPredicted RBP17.51■□□□□ 0.39
SPG7-209ENST00000564047 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
SPG7-209ENST00000564047 PXDNQ92626 1479 aa17.5■□□□□ 0.39
SPG7-209ENST00000564047 SOS2Q07890 1332 aaPredicted RBP17.5■□□□□ 0.39
SPG7-209ENST00000564047 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
SPG7-209ENST00000564047 DDX17Q92841 729 aaKnown RBP17.5■□□□□ 0.39
SPG7-209ENST00000564047 COG3Q96JB2 828 aa17.5■□□□□ 0.39
SPG7-209ENST00000564047 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
SPG7-209ENST00000564047 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
SPG7-209ENST00000564047 MYBBP1AQ9BQG0 1328 aaKnown RBP17.48■□□□□ 0.39
SPG7-209ENST00000564047 OVOS2A0A0J9YW53 1432 aa17.48■□□□□ 0.39
SPG7-209ENST00000564047 OVOS2Q6IE36 1432 aa17.48■□□□□ 0.39
SPG7-209ENST00000564047 TRPM3Q9HCF6 1732 aaPredicted RBP17.48■□□□□ 0.39
SPG7-209ENST00000564047 CCER2I3L3R5 266 aa17.47■□□□□ 0.39
SPG7-209ENST00000564047 NLRP6P59044 892 aa17.47■□□□□ 0.39
SPG7-209ENST00000564047 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
SPG7-209ENST00000564047 SPATA31A3Q5VYP0 1347 aa17.47■□□□□ 0.39
SPG7-209ENST00000564047 PIK3C2AO00443 1686 aa17.46■□□□□ 0.39
SPG7-209ENST00000564047 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
SPG7-209ENST00000564047 TNS3Q68CZ2 1445 aa17.46■□□□□ 0.39
SPG7-209ENST00000564047 NLRP13Q86W25 1043 aa17.45■□□□□ 0.38
SPG7-209ENST00000564047 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
SPG7-209ENST00000564047 ARHGEF10O15013 1369 aa17.43■□□□□ 0.38
SPG7-209ENST00000564047 AATKQ6ZMQ8 1374 aa17.43■□□□□ 0.38
SPG7-209ENST00000564047 USP54Q70EL1 1684 aa17.43■□□□□ 0.38
SPG7-209ENST00000564047 ATRNO75882 1429 aa17.43■□□□□ 0.38
SPG7-209ENST00000564047 ALS2Q96Q42 1657 aa17.42■□□□□ 0.38
SPG7-209ENST00000564047 TNNT2P45379 298 aaPredicted RBP17.42■□□□□ 0.38
SPG7-209ENST00000564047 NUTM2GQ5VZR2 741 aa17.42■□□□□ 0.38
SPG7-209ENST00000564047 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
SPG7-209ENST00000564047 USP19O94966 1318 aa17.41■□□□□ 0.38
SPG7-209ENST00000564047 KCNH5Q8NCM2 988 aa17.4■□□□□ 0.38
SPG7-209ENST00000564047 SLIT3O75094 1523 aa17.38■□□□□ 0.37
SPG7-209ENST00000564047 COL22A1Q8NFW1 1626 aaPredicted RBP17.38■□□□□ 0.37
SPG7-209ENST00000564047 MTHFSP49914 203 aa17.37■□□□□ 0.37
SPG7-209ENST00000564047 MRS2Q9HD23 443 aa17.37■□□□□ 0.37
SPG7-209ENST00000564047 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
SPG7-209ENST00000564047 MARF1Q9Y4F3 1742 aaKnown RBP17.37■□□□□ 0.37
SPG7-209ENST00000564047 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
SPG7-209ENST00000564047 GCP02774 474 aa17.36■□□□□ 0.37
SPG7-209ENST00000564047 FBLN1P23142 703 aa17.36■□□□□ 0.37
SPG7-209ENST00000564047 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
SPG7-209ENST00000564047 CENPBP07199 599 aaPredicted RBP17.35■□□□□ 0.37
SPG7-209ENST00000564047 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms