RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 KRT27Q7Z3Y8 459 aa13.74□□□□□ -0.21
CLN6-203ENST00000563917 GLI3P10071 1580 aa13.74□□□□□ -0.21
CLN6-203ENST00000563917 ABCA3Q99758 1704 aa13.73□□□□□ -0.21
CLN6-203ENST00000563917 CENPJQ9HC77 1338 aaPredicted RBP13.73□□□□□ -0.21
CLN6-203ENST00000563917 ATP7BP35670 1465 aa13.73□□□□□ -0.21
CLN6-203ENST00000563917 TRPM3Q9HCF6 1732 aaPredicted RBP13.73□□□□□ -0.21
CLN6-203ENST00000563917 BLMP54132 1417 aaPredicted RBP13.73□□□□□ -0.21
CLN6-203ENST00000563917 ONECUT3O60422 494 aaPredicted RBP13.72□□□□□ -0.21
CLN6-203ENST00000563917 NBPF1Q3BBV0 1214 aa13.72□□□□□ -0.21
CLN6-203ENST00000563917 COL14A1Q05707 1796 aaKnown RBP13.72□□□□□ -0.21
CLN6-203ENST00000563917 ALS2Q96Q42 1657 aa13.72□□□□□ -0.21
CLN6-203ENST00000563917 ACEP12821 1306 aa13.71□□□□□ -0.21
CLN6-203ENST00000563917 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
CLN6-203ENST00000563917 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.21
CLN6-203ENST00000563917 EVA1CP58658 441 aa13.7□□□□□ -0.22
CLN6-203ENST00000563917 ABTB2Q8N961 1025 aa13.7□□□□□ -0.22
CLN6-203ENST00000563917 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
CLN6-203ENST00000563917 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
CLN6-203ENST00000563917 NUTM2GQ5VZR2 741 aa13.69□□□□□ -0.22
CLN6-203ENST00000563917 L3MBTL2Q969R5 705 aa13.69□□□□□ -0.22
CLN6-203ENST00000563917 POLR3AO14802 1390 aaPredicted RBP13.69□□□□□ -0.22
CLN6-203ENST00000563917 ZC3H6P61129 1189 aaKnown RBP13.68□□□□□ -0.22
CLN6-203ENST00000563917 NLRP13Q86W25 1043 aa13.68□□□□□ -0.22
CLN6-203ENST00000563917 STRN4Q9NRL3 753 aa13.68□□□□□ -0.22
CLN6-203ENST00000563917 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
CLN6-203ENST00000563917 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
CLN6-203ENST00000563917 BAG6P46379 1132 aa13.67□□□□□ -0.22
CLN6-203ENST00000563917 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
CLN6-203ENST00000563917 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
CLN6-203ENST00000563917 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
CLN6-203ENST00000563917 PPIP5K1Q6PFW1 1433 aa13.66□□□□□ -0.22
CLN6-203ENST00000563917 CABP2Q9NPB3 220 aa13.66□□□□□ -0.22
CLN6-203ENST00000563917 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
CLN6-203ENST00000563917 EVC2Q86UK5 1308 aa13.65□□□□□ -0.22
CLN6-203ENST00000563917 NRAPQ86VF7 1730 aa13.65□□□□□ -0.22
CLN6-203ENST00000563917 DEFB132Q7Z7B7 95 aa13.65□□□□□ -0.22
CLN6-203ENST00000563917 ROCK2O75116 1388 aaKnown RBP13.65□□□□□ -0.22
CLN6-203ENST00000563917 TOPAZ1Q8N9V7 1692 aa13.65□□□□□ -0.22
CLN6-203ENST00000563917 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
CLN6-203ENST00000563917 USP35Q9P2H5 1018 aa13.64□□□□□ -0.23
CLN6-203ENST00000563917 CABP1Q9NZU7 370 aa13.63□□□□□ -0.23
CLN6-203ENST00000563917 SPATA31A1Q5TZJ5 1347 aa13.63□□□□□ -0.23
CLN6-203ENST00000563917 QRICH2Q9H0J4 1663 aa13.63□□□□□ -0.23
CLN6-203ENST00000563917 CRYBG1Q9Y4K1 1723 aa13.62□□□□□ -0.23
CLN6-203ENST00000563917 PHRF1Q9P1Y6 1649 aaKnown RBP13.62□□□□□ -0.23
CLN6-203ENST00000563917 ZBTB7CA1YPR0 619 aa13.62□□□□□ -0.23
CLN6-203ENST00000563917 GCP02774 474 aa13.62□□□□□ -0.23
CLN6-203ENST00000563917 NLRP6P59044 892 aa13.62□□□□□ -0.23
CLN6-203ENST00000563917 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
CLN6-203ENST00000563917 FAM196AQ6ZSG2 479 aa13.61□□□□□ -0.23
CLN6-203ENST00000563917 CPDO75976 1380 aa13.6□□□□□ -0.23
CLN6-203ENST00000563917 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
CLN6-203ENST00000563917 USP19O94966 1318 aa13.6□□□□□ -0.23
CLN6-203ENST00000563917 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
CLN6-203ENST00000563917 FAM182BQ5T319 152 aa13.59□□□□□ -0.23
CLN6-203ENST00000563917 BARGINQ6ZT62 677 aa13.59□□□□□ -0.23
CLN6-203ENST00000563917 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
CLN6-203ENST00000563917 EP400Q96L91 3159 aa13.59□□□□□ -0.23
CLN6-203ENST00000563917 USP6P35125 1406 aa13.58□□□□□ -0.24
CLN6-203ENST00000563917 TRPM1Q7Z4N2 1603 aa13.58□□□□□ -0.24
CLN6-203ENST00000563917 THRAP3Q9Y2W1 955 aaKnown RBP13.58□□□□□ -0.24
CLN6-203ENST00000563917 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.24
CLN6-203ENST00000563917 RGPD1P0DJD0 1748 aa13.57□□□□□ -0.24
CLN6-203ENST00000563917 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
CLN6-203ENST00000563917 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
CLN6-203ENST00000563917 KCNH5Q8NCM2 988 aa13.57□□□□□ -0.24
CLN6-203ENST00000563917 TONSLQ96HA7 1378 aa13.57□□□□□ -0.24
CLN6-203ENST00000563917 THSD7AQ9UPZ6 1657 aa13.56□□□□□ -0.24
CLN6-203ENST00000563917 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
CLN6-203ENST00000563917 CARD11Q9BXL7 1154 aa13.56□□□□□ -0.24
CLN6-203ENST00000563917 TRIM37O94972 964 aa13.55□□□□□ -0.24
CLN6-203ENST00000563917 CAMTA1Q9Y6Y1 1673 aa13.55□□□□□ -0.24
CLN6-203ENST00000563917 TTC21AQ8NDW8 1320 aa13.55□□□□□ -0.24
CLN6-203ENST00000563917 APBA3O96018 575 aa13.54□□□□□ -0.24
CLN6-203ENST00000563917 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
CLN6-203ENST00000563917 CRB1P82279 1406 aa13.54□□□□□ -0.24
CLN6-203ENST00000563917 PSDA5PKW4 1024 aaPredicted RBP13.53□□□□□ -0.24
CLN6-203ENST00000563917 CSB-PGBD3P0DP91 1061 aa13.53□□□□□ -0.24
CLN6-203ENST00000563917 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
CLN6-203ENST00000563917 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
CLN6-203ENST00000563917 KTN1Q86UP2 1357 aaKnown RBP13.53□□□□□ -0.24
CLN6-203ENST00000563917 SOX12O15370 315 aa13.52□□□□□ -0.25
CLN6-203ENST00000563917 TMC1Q8TDI8 760 aa13.52□□□□□ -0.25
CLN6-203ENST00000563917 PARD3Q8TEW0 1356 aa13.52□□□□□ -0.25
CLN6-203ENST00000563917 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
CLN6-203ENST00000563917 LMO7Q8WWI1 1683 aa13.51□□□□□ -0.25
CLN6-203ENST00000563917 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
CLN6-203ENST00000563917 EZH2Q15910 746 aaKnown RBP13.51□□□□□ -0.25
CLN6-203ENST00000563917 HDGFL2Q7Z4V5 671 aaPredicted RBP13.51□□□□□ -0.25
CLN6-203ENST00000563917 SLIT3O75094 1523 aa13.5□□□□□ -0.25
CLN6-203ENST00000563917 SBNO2Q9Y2G9 1366 aa13.5□□□□□ -0.25
CLN6-203ENST00000563917 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
CLN6-203ENST00000563917 DDB1Q16531 1140 aa13.5□□□□□ -0.25
CLN6-203ENST00000563917 NBPF14Q5TI25 921 aa13.5□□□□□ -0.25
CLN6-203ENST00000563917 CDCA7Q9BWT1 371 aaPredicted RBP13.5□□□□□ -0.25
CLN6-203ENST00000563917 R3HDM1Q15032 1099 aaKnown RBP13.49□□□□□ -0.25
CLN6-203ENST00000563917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLN6-203ENST00000563917 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
CLN6-203ENST00000563917 WDR17Q8IZU2 1322 aa13.48□□□□□ -0.25
CLN6-203ENST00000563917 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms