RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SPATA31A1Q5TZJ5 1347 aa23.94■■□□□ 1.42
RNF40-205ENST00000563909 SENP3-EIF4A1A0A087X0R7 540 aa23.94■■□□□ 1.42
RNF40-205ENST00000563909 ZNF784Q8NCA9 323 aaPredicted RBP23.94■■□□□ 1.42
RNF40-205ENST00000563909 SLC4A1APQ9BWU0 796 aaKnown RBP23.94■■□□□ 1.42
RNF40-205ENST00000563909 SAFB2Q14151 953 aaKnown RBP eCLIP23.93■■□□□ 1.42
RNF40-205ENST00000563909 IFFO2Q5TF58 517 aa23.93■■□□□ 1.42
RNF40-205ENST00000563909 PRDM11Q9NQV5 511 aa23.93■■□□□ 1.42
RNF40-205ENST00000563909 RREB1Q92766 1687 aa23.92■■□□□ 1.42
RNF40-205ENST00000563909 ANKRD30BQ9BXX2 1392 aa23.92■■□□□ 1.42
RNF40-205ENST00000563909 NUP188Q5SRE5 1749 aa23.92■■□□□ 1.42
RNF40-205ENST00000563909 CAMTA1Q9Y6Y1 1673 aa23.9■■□□□ 1.42
RNF40-205ENST00000563909 PDE3BQ13370 1112 aa23.9■■□□□ 1.42
RNF40-205ENST00000563909 STRN4Q9NRL3 753 aa23.9■■□□□ 1.42
RNF40-205ENST00000563909 UTRNP46939 3433 aa23.9■■□□□ 1.42
RNF40-205ENST00000563909 GPRASP1Q5JY77 1395 aa23.89■■□□□ 1.41
RNF40-205ENST00000563909 PIK3C2GO75747 1445 aa23.88■■□□□ 1.41
RNF40-205ENST00000563909 PRAM1Q96QH2 718 aa23.88■■□□□ 1.41
RNF40-205ENST00000563909 USP35Q9P2H5 1018 aa23.88■■□□□ 1.41
RNF40-205ENST00000563909 TRPM3Q9HCF6 1732 aaPredicted RBP23.87■■□□□ 1.41
RNF40-205ENST00000563909 ALS2Q96Q42 1657 aa23.86■■□□□ 1.41
RNF40-205ENST00000563909 ANKARQ7Z5J8 1434 aa23.85■■□□□ 1.41
RNF40-205ENST00000563909 PAK3O75914 559 aaPredicted RBP23.85■■□□□ 1.41
RNF40-205ENST00000563909 CHRNA2Q15822 529 aa23.85■■□□□ 1.41
RNF40-205ENST00000563909 ACIN1Q9UKV3 1341 aaKnown RBP23.84■■□□□ 1.41
RNF40-205ENST00000563909 SPATA31E1Q6ZUB1 1445 aa23.84■■□□□ 1.41
RNF40-205ENST00000563909 PPARGC1BQ86YN6 1023 aaKnown RBP23.84■■□□□ 1.41
RNF40-205ENST00000563909 DHX57Q6P158 1386 aaKnown RBP23.83■■□□□ 1.41
RNF40-205ENST00000563909 KIAA0232Q92628 1395 aa23.83■■□□□ 1.41
RNF40-205ENST00000563909 C1QTNF8P60827 252 aa23.83■■□□□ 1.41
RNF40-205ENST00000563909 C14orf93Q9H972 538 aaKnown RBP23.83■■□□□ 1.41
RNF40-205ENST00000563909 POGKQ9P215 609 aa23.82■■□□□ 1.4
RNF40-205ENST00000563909 BARGINQ6ZT62 677 aa23.81■■□□□ 1.4
RNF40-205ENST00000563909 EVA1CP58658 441 aa23.8■■□□□ 1.4
RNF40-205ENST00000563909 CFAP70Q5T0N1 1121 aa23.79■■□□□ 1.4
RNF40-205ENST00000563909 ZC3H6P61129 1189 aaKnown RBP23.78■■□□□ 1.4
RNF40-205ENST00000563909 NGDNQ8NEJ9 315 aaKnown RBP23.78■■□□□ 1.4
RNF40-205ENST00000563909 HIRIP3Q9BW71 556 aaPredicted RBP23.78■■□□□ 1.4
RNF40-205ENST00000563909 CRYBG1Q9Y4K1 1723 aa23.78■■□□□ 1.4
RNF40-205ENST00000563909 PRR36Q9H6K5 1346 aa23.76■■□□□ 1.39
RNF40-205ENST00000563909 PDGFDQ9GZP0 370 aaPredicted RBP23.75■■□□□ 1.39
RNF40-205ENST00000563909 NRKQ7Z2Y5 1582 aa23.74■■□□□ 1.39
RNF40-205ENST00000563909 ZBTB7AO95365 584 aa23.74■■□□□ 1.39
RNF40-205ENST00000563909 LARP1Q6PKG0 1096 aaKnown RBP23.73■■□□□ 1.39
RNF40-205ENST00000563909 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
RNF40-205ENST00000563909 ANO8Q9HCE9 1232 aaPredicted RBP23.73■■□□□ 1.39
RNF40-205ENST00000563909 SSH2Q76I76 1423 aa23.73■■□□□ 1.39
RNF40-205ENST00000563909 CEP350Q5VT06 3117 aa23.73■■□□□ 1.39
RNF40-205ENST00000563909 MINK1Q8N4C8 1332 aaPredicted RBP23.71■■□□□ 1.39
RNF40-205ENST00000563909 PTGER2P43116 358 aa23.71■■□□□ 1.39
RNF40-205ENST00000563909 EIF3AQ14152 1382 aaKnown RBP23.7■■□□□ 1.38
RNF40-205ENST00000563909 NUTM2GQ5VZR2 741 aa23.7■■□□□ 1.38
RNF40-205ENST00000563909 ATF5Q9Y2D1 282 aaPredicted RBP23.7■■□□□ 1.38
RNF40-205ENST00000563909 C11orf95C9JLR9 678 aaPredicted RBP23.69■■□□□ 1.38
RNF40-205ENST00000563909 PLSCR1O15162 318 aa23.69■■□□□ 1.38
RNF40-205ENST00000563909 SYT17Q9BSW7 474 aa23.69■■□□□ 1.38
RNF40-205ENST00000563909 CASZ1Q86V15 1759 aa23.69■■□□□ 1.38
RNF40-205ENST00000563909 FHDC1Q9C0D6 1143 aaPredicted RBP23.68■■□□□ 1.38
RNF40-205ENST00000563909 BCL11BQ9C0K0 894 aaPredicted RBP23.68■■□□□ 1.38
RNF40-205ENST00000563909 DLC1Q96QB1 1528 aa23.68■■□□□ 1.38
RNF40-205ENST00000563909 MYOM1P52179 1685 aa23.67■■□□□ 1.38
RNF40-205ENST00000563909 WASLO00401 505 aaPredicted RBP23.67■■□□□ 1.38
RNF40-205ENST00000563909 TULP4Q9NRJ4 1543 aa23.66■■□□□ 1.38
RNF40-205ENST00000563909 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
RNF40-205ENST00000563909 THRAP3Q9Y2W1 955 aaKnown RBP23.66■■□□□ 1.38
RNF40-205ENST00000563909 PHRF1Q9P1Y6 1649 aaKnown RBP23.65■■□□□ 1.38
RNF40-205ENST00000563909 OVOS2A0A0G2JMS6 1433 aa23.62■■□□□ 1.37
RNF40-205ENST00000563909 OVOS2A0A0J9YW53 1432 aa23.62■■□□□ 1.37
RNF40-205ENST00000563909 OVOS2Q6IE36 1432 aa23.62■■□□□ 1.37
RNF40-205ENST00000563909 PTF1AQ7RTS3 328 aa23.62■■□□□ 1.37
RNF40-205ENST00000563909 PROM2Q8N271 834 aa23.62■■□□□ 1.37
RNF40-205ENST00000563909 CHD4Q14839 1912 aa23.61■■□□□ 1.37
RNF40-205ENST00000563909 MPHOSPH9Q99550 1183 aa23.61■■□□□ 1.37
RNF40-205ENST00000563909 RGPD3A6NKT7 1758 aaPredicted RBP23.6■■□□□ 1.37
RNF40-205ENST00000563909 RGPD4Q7Z3J3 1758 aa23.6■■□□□ 1.37
RNF40-205ENST00000563909 GIGYF1O75420 1035 aaPredicted RBP23.59■■□□□ 1.37
RNF40-205ENST00000563909 PARP4Q9UKK3 1724 aaKnown RBP23.59■■□□□ 1.37
RNF40-205ENST00000563909 ATP7BP35670 1465 aa23.58■■□□□ 1.37
RNF40-205ENST00000563909 NUDT16Q96DE0 195 aaKnown RBP23.58■■□□□ 1.37
RNF40-205ENST00000563909 STK32BQ9NY57 414 aa23.58■■□□□ 1.37
RNF40-205ENST00000563909 PEAK1Q9H792 1746 aa23.57■■□□□ 1.36
RNF40-205ENST00000563909 CPDO75976 1380 aa23.56■■□□□ 1.36
RNF40-205ENST00000563909 MTFR1LQ9H019 292 aa23.56■■□□□ 1.36
RNF40-205ENST00000563909 DDB1Q16531 1140 aa23.55■■□□□ 1.36
RNF40-205ENST00000563909 ABTB2Q8N961 1025 aa23.55■■□□□ 1.36
RNF40-205ENST00000563909 LMO7Q8WWI1 1683 aa23.54■■□□□ 1.36
RNF40-205ENST00000563909 ADGRB1O14514 1584 aa23.54■■□□□ 1.36
RNF40-205ENST00000563909 SLC15A2Q16348 729 aa23.54■■□□□ 1.36
RNF40-205ENST00000563909 SGIP1Q9BQI5 828 aa23.53■■□□□ 1.36
RNF40-205ENST00000563909 SBF2Q86WG5 1849 aa23.53■■□□□ 1.36
RNF40-205ENST00000563909 COL5A2P05997 1499 aaPredicted RBP23.52■■□□□ 1.36
RNF40-205ENST00000563909 GPR162Q16538 588 aa23.52■■□□□ 1.36
RNF40-205ENST00000563909 TXNRD1Q16881 649 aa23.52■■□□□ 1.36
RNF40-205ENST00000563909 ARXQ96QS3 562 aa23.52■■□□□ 1.36
RNF40-205ENST00000563909 CRB1P82279 1406 aa23.51■■□□□ 1.35
RNF40-205ENST00000563909 ACEP12821 1306 aa23.51■■□□□ 1.35
RNF40-205ENST00000563909 ITSN1Q15811 1721 aa23.5■■□□□ 1.35
RNF40-205ENST00000563909 GOLGB1Q14789 3259 aaKnown RBP23.5■■□□□ 1.35
RNF40-205ENST00000563909 GCP02774 474 aa23.49■■□□□ 1.35
RNF40-205ENST00000563909 USP19O94966 1318 aa23.49■■□□□ 1.35
RNF40-205ENST00000563909 ZBTB7CA1YPR0 619 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms