RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 AXIN2Q9Y2T1 843 aa7.78□□□□□ -1.16
HERPUD1-207ENST00000563781 SETD5Q9C0A6 1442 aa7.78□□□□□ -1.16
HERPUD1-207ENST00000563781 GCC2Q8IWJ2 1684 aa7.77□□□□□ -1.17
HERPUD1-207ENST00000563781 PPP1R3GB7ZBB8 358 aa7.77□□□□□ -1.17
HERPUD1-207ENST00000563781 PCGF6Q9BYE7 350 aa7.77□□□□□ -1.17
HERPUD1-207ENST00000563781 MROH1Q8NDA8 1641 aa7.77□□□□□ -1.17
HERPUD1-207ENST00000563781 EIF2AK4Q9P2K8 1649 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-207ENST00000563781 RAB3GAP2Q9H2M9 1393 aa7.76□□□□□ -1.17
HERPUD1-207ENST00000563781 BCORL1Q5H9F3 1711 aa7.76□□□□□ -1.17
HERPUD1-207ENST00000563781 KIF3BO15066 747 aa7.76□□□□□ -1.17
HERPUD1-207ENST00000563781 ZMYND10O75800 440 aa7.76□□□□□ -1.17
HERPUD1-207ENST00000563781 HIC1Q14526 733 aa7.76□□□□□ -1.17
HERPUD1-207ENST00000563781 RNF17Q9BXT8 1623 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-207ENST00000563781 PRDM15P57071 1507 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-207ENST00000563781 GNPATO15228 680 aa7.75□□□□□ -1.17
HERPUD1-207ENST00000563781 DMRTA1Q5VZB9 504 aa7.75□□□□□ -1.17
HERPUD1-207ENST00000563781 UNC13BO14795 1591 aa7.75□□□□□ -1.17
HERPUD1-207ENST00000563781 VWDEQ8N2E2 1590 aa7.75□□□□□ -1.17
HERPUD1-207ENST00000563781 DEPDC5O75140 1603 aa7.74□□□□□ -1.17
HERPUD1-207ENST00000563781 PRSS12P56730 875 aa7.74□□□□□ -1.17
HERPUD1-207ENST00000563781 MLECQ14165 292 aa7.74□□□□□ -1.17
HERPUD1-207ENST00000563781 GGT6Q6P531 493 aa7.74□□□□□ -1.17
HERPUD1-207ENST00000563781 BARGINQ6ZT62 677 aa7.74□□□□□ -1.17
HERPUD1-207ENST00000563781 ZBED2Q9BTP6 218 aa7.74□□□□□ -1.17
HERPUD1-207ENST00000563781 ARID4BQ4LE39 1312 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-207ENST00000563781 KDM5DQ9BY66 1539 aa7.73□□□□□ -1.17
HERPUD1-207ENST00000563781 FECHP22830 423 aa7.73□□□□□ -1.17
HERPUD1-207ENST00000563781 HRCP23327 699 aa7.73□□□□□ -1.17
HERPUD1-207ENST00000563781 TTC13Q8NBP0 860 aa7.73□□□□□ -1.17
HERPUD1-207ENST00000563781 CDCA7LQ96GN5 454 aa7.73□□□□□ -1.17
HERPUD1-207ENST00000563781 SLC4A5Q9BY07 1137 aa7.73□□□□□ -1.17
HERPUD1-207ENST00000563781 RBM27Q9P2N5 1060 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-207ENST00000563781 LMTK2Q8IWU2 1503 aa7.73□□□□□ -1.17
HERPUD1-207ENST00000563781 CDAN1Q8IWY9 1227 aa7.72□□□□□ -1.17
HERPUD1-207ENST00000563781 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
HERPUD1-207ENST00000563781 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
HERPUD1-207ENST00000563781 PZPP20742 1482 aa7.72□□□□□ -1.17
HERPUD1-207ENST00000563781 ABCC3O15438 1527 aa7.72□□□□□ -1.17
HERPUD1-207ENST00000563781 FAM135AQ9P2D6 1515 aa7.72□□□□□ -1.17
HERPUD1-207ENST00000563781 NUP155O75694 1391 aa7.71□□□□□ -1.17
HERPUD1-207ENST00000563781 ADAMTSL3P82987 1691 aa7.71□□□□□ -1.18
HERPUD1-207ENST00000563781 ONECUT3O60422 494 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-207ENST00000563781 LSM11P83369 360 aaKnown RBP eCLIP7.71□□□□□ -1.18
HERPUD1-207ENST00000563781 PROX2Q3B8N5 592 aa7.71□□□□□ -1.18
HERPUD1-207ENST00000563781 PADI6Q6TGC4 694 aa7.71□□□□□ -1.18
HERPUD1-207ENST00000563781 FAM198AQ9UFP1 575 aa7.71□□□□□ -1.18
HERPUD1-207ENST00000563781 TRIM6-TRIM34B2RNG4 842 aa7.7□□□□□ -1.18
HERPUD1-207ENST00000563781 BRPF1P55201 1214 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-207ENST00000563781 TSKSQ9UJT2 592 aa7.7□□□□□ -1.18
HERPUD1-207ENST00000563781 IQGAP3Q86VI3 1631 aa7.7□□□□□ -1.18
HERPUD1-207ENST00000563781 KANK1Q14678 1352 aa7.7□□□□□ -1.18
HERPUD1-207ENST00000563781 CNTLNQ9NXG0 1405 aa7.69□□□□□ -1.18
HERPUD1-207ENST00000563781 TK2O00142 265 aa7.69□□□□□ -1.18
HERPUD1-207ENST00000563781 MAP2K5Q13163 448 aa7.69□□□□□ -1.18
HERPUD1-207ENST00000563781 TRIM52Q96A61 297 aa7.69□□□□□ -1.18
HERPUD1-207ENST00000563781 VPS9D1Q9Y2B5 631 aa7.69□□□□□ -1.18
HERPUD1-207ENST00000563781 MADDQ8WXG6 1647 aa7.69□□□□□ -1.18
HERPUD1-207ENST00000563781 WASHC2CQ9Y4E1 1318 aa7.69□□□□□ -1.18
HERPUD1-207ENST00000563781 NPATQ14207 1427 aa7.69□□□□□ -1.18
HERPUD1-207ENST00000563781 ARHGAP31Q2M1Z3 1444 aa7.69□□□□□ -1.18
HERPUD1-207ENST00000563781 EFCAB6Q5THR3 1501 aa7.68□□□□□ -1.18
HERPUD1-207ENST00000563781 IRF6O14896 467 aa7.68□□□□□ -1.18
HERPUD1-207ENST00000563781 KRI1Q8N9T8 703 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-207ENST00000563781 MINK1Q8N4C8 1332 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-207ENST00000563781 ACIN1Q9UKV3 1341 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-207ENST00000563781 ZC3H13Q5T200 1668 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 ADGRD1Q6QNK2 874 aa7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 ANKRD13DQ6ZTN6 518 aa7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 PACS2Q86VP3 889 aa7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 MPHOSPH9Q99550 1183 aa7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 KIAA1468Q9P260 1216 aa7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 RABGEF1Q9UJ41 708 aa7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 ZMYM3Q14202 1370 aa7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 DHX57Q6P158 1386 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 TET3O43151 1660 aa7.67□□□□□ -1.18
HERPUD1-207ENST00000563781 CEP152O94986 1710 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 BHMG1C9JSJ3 638 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 PCDH10Q9P2E7 1040 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 ADGRG1Q9Y653 693 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 NOS1P29475 1434 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 PTPRMP28827 1452 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 PLA2R1Q13018 1463 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 CAMSAP1Q5T5Y3 1602 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 MROH2AA6NES4 1674 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 CLTCQ00610 1675 aaKnown RBP7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 FER1L4A9Z1Z3 1794 aa7.66□□□□□ -1.18
HERPUD1-207ENST00000563781 PTPRTO14522 1441 aa7.65□□□□□ -1.18
HERPUD1-207ENST00000563781 HRO43593 1189 aa7.65□□□□□ -1.18
HERPUD1-207ENST00000563781 CEBPAP49715 358 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-207ENST00000563781 ERVK-7P63135 1459 aa7.65□□□□□ -1.18
HERPUD1-207ENST00000563781 FAM161AQ3B820 660 aa7.65□□□□□ -1.18
HERPUD1-207ENST00000563781 RPRD2Q5VT52 1461 aaKnown RBP7.65□□□□□ -1.18
HERPUD1-207ENST00000563781 RIMS1Q86UR5 1692 aaKnown RBP7.65□□□□□ -1.18
HERPUD1-207ENST00000563781 ESF1Q9H501 851 aaKnown RBP7.65□□□□□ -1.18
HERPUD1-207ENST00000563781 SPATA31D1Q6ZQQ2 1576 aa7.64□□□□□ -1.19
HERPUD1-207ENST00000563781 FBXO31Q5XUX0 539 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-207ENST00000563781 TATDN2Q93075 761 aa7.64□□□□□ -1.19
HERPUD1-207ENST00000563781 AK7Q96M32 723 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms