RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
SPG7-206ENST00000562775 ZNF335Q9H4Z2 1342 aaPredicted RBP18.87■□□□□ 0.61
SPG7-206ENST00000562775 NME9Q86XW9 330 aa18.87■□□□□ 0.61
SPG7-206ENST00000562775 TTC21AQ8NDW8 1320 aa18.86■□□□□ 0.61
SPG7-206ENST00000562775 ATF3P18847 181 aa18.85■□□□□ 0.61
SPG7-206ENST00000562775 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
SPG7-206ENST00000562775 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
SPG7-206ENST00000562775 HNRNPUQ00839 825 aaKnown RBP eCLIP18.85■□□□□ 0.61
SPG7-206ENST00000562775 ESCO1Q5FWF5 840 aa18.85■□□□□ 0.61
SPG7-206ENST00000562775 MTHFSP49914 203 aa18.84■□□□□ 0.61
SPG7-206ENST00000562775 COG3Q96JB2 828 aa18.84■□□□□ 0.61
SPG7-206ENST00000562775 INSRP06213 1382 aa18.83■□□□□ 0.61
SPG7-206ENST00000562775 MSH6P52701 1360 aa18.83■□□□□ 0.61
SPG7-206ENST00000562775 XIRP1Q702N8 1843 aaKnown RBP18.83■□□□□ 0.61
SPG7-206ENST00000562775 C1orf167Q5SNV9 1468 aa18.83■□□□□ 0.61
SPG7-206ENST00000562775 CADPS2Q86UW7 1296 aa18.83■□□□□ 0.6
SPG7-206ENST00000562775 MST1RQ04912 1400 aa18.82■□□□□ 0.6
SPG7-206ENST00000562775 CFAP53Q96M91 514 aa18.81■□□□□ 0.6
SPG7-206ENST00000562775 ZRANB1Q9UGI0 708 aa18.81■□□□□ 0.6
SPG7-206ENST00000562775 ORAI2Q96SN7 254 aa18.81■□□□□ 0.6
SPG7-206ENST00000562775 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
SPG7-206ENST00000562775 AATKQ6ZMQ8 1374 aa18.8■□□□□ 0.6
SPG7-206ENST00000562775 OVOS2A0A0J9YW53 1432 aa18.8■□□□□ 0.6
SPG7-206ENST00000562775 OVOS2Q6IE36 1432 aa18.8■□□□□ 0.6
SPG7-206ENST00000562775 KIF1AQ12756 1690 aa18.79■□□□□ 0.6
SPG7-206ENST00000562775 USP31Q70CQ4 1352 aa18.79■□□□□ 0.6
SPG7-206ENST00000562775 PSME1Q06323 249 aa18.77■□□□□ 0.6
SPG7-206ENST00000562775 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
SPG7-206ENST00000562775 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
SPG7-206ENST00000562775 POLKQ9UBT6 870 aa18.76■□□□□ 0.59
SPG7-206ENST00000562775 BLMP54132 1417 aaPredicted RBP18.75■□□□□ 0.59
SPG7-206ENST00000562775 FOXO3O43524 673 aa18.75■□□□□ 0.59
SPG7-206ENST00000562775 MAP2P11137 1827 aaKnown RBP18.75■□□□□ 0.59
SPG7-206ENST00000562775 PNPLA6Q8IY17 1366 aa18.74■□□□□ 0.59
SPG7-206ENST00000562775 ZBED9Q6R2W3 1325 aa18.74■□□□□ 0.59
SPG7-206ENST00000562775 SHPRHQ149N8 1683 aa18.74■□□□□ 0.59
SPG7-206ENST00000562775 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
SPG7-206ENST00000562775 USP54Q70EL1 1684 aa18.73■□□□□ 0.59
SPG7-206ENST00000562775 PAK3O75914 559 aaPredicted RBP18.73■□□□□ 0.59
SPG7-206ENST00000562775 COL3A1P02461 1466 aaPredicted RBP18.73■□□□□ 0.59
SPG7-206ENST00000562775 FBLN1P23142 703 aa18.72■□□□□ 0.59
SPG7-206ENST00000562775 NLRP6P59044 892 aa18.72■□□□□ 0.59
SPG7-206ENST00000562775 ABTB2Q8N961 1025 aa18.72■□□□□ 0.59
SPG7-206ENST00000562775 KRT28Q7Z3Y7 464 aa18.71■□□□□ 0.59
SPG7-206ENST00000562775 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
SPG7-206ENST00000562775 CDK12Q9NYV4 1490 aaPredicted RBP18.7■□□□□ 0.58
SPG7-206ENST00000562775 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
SPG7-206ENST00000562775 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
SPG7-206ENST00000562775 MARF1Q9Y4F3 1742 aaKnown RBP18.69■□□□□ 0.58
SPG7-206ENST00000562775 PPM1GO15355 546 aaPredicted RBP18.68■□□□□ 0.58
SPG7-206ENST00000562775 DIAPH1O60610 1272 aaKnown RBP18.68■□□□□ 0.58
SPG7-206ENST00000562775 RRS1Q15050 365 aaKnown RBP18.68■□□□□ 0.58
SPG7-206ENST00000562775 SLAIN2Q9P270 581 aa18.68■□□□□ 0.58
SPG7-206ENST00000562775 NPHP3Q7Z494 1330 aa18.68■□□□□ 0.58
SPG7-206ENST00000562775 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
SPG7-206ENST00000562775 XPCQ01831 940 aaPredicted RBP18.67■□□□□ 0.58
SPG7-206ENST00000562775 NUTM2GQ5VZR2 741 aa18.67■□□□□ 0.58
SPG7-206ENST00000562775 BRINP3Q76B58 766 aa18.66■□□□□ 0.58
SPG7-206ENST00000562775 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.58
SPG7-206ENST00000562775 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.581e-21■■□□□ 12.5
SPG7-206ENST00000562775 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
SPG7-206ENST00000562775 SOX12O15370 315 aa18.64■□□□□ 0.57
SPG7-206ENST00000562775 MAP3K19Q56UN5 1328 aa18.63■□□□□ 0.57
SPG7-206ENST00000562775 U2SURPO15042 1029 aaKnown RBP18.63■□□□□ 0.57
SPG7-206ENST00000562775 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
SPG7-206ENST00000562775 KIF24Q5T7B8 1368 aa18.62■□□□□ 0.57
SPG7-206ENST00000562775 SENP3-EIF4A1A0A087X0R7 540 aa18.62■□□□□ 0.57
SPG7-206ENST00000562775 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
SPG7-206ENST00000562775 RUNDC1Q96C34 613 aa18.62■□□□□ 0.57
SPG7-206ENST00000562775 ALS2Q96Q42 1657 aa18.62■□□□□ 0.57
SPG7-206ENST00000562775 PXDNQ92626 1479 aa18.61■□□□□ 0.57
SPG7-206ENST00000562775 IL13P35225 146 aa18.61■□□□□ 0.57
SPG7-206ENST00000562775 DDX17Q92841 729 aaKnown RBP18.61■□□□□ 0.57
SPG7-206ENST00000562775 PEAK1Q9H792 1746 aa18.61■□□□□ 0.57
SPG7-206ENST00000562775 LMOD2Q6P5Q4 547 aa18.6■□□□□ 0.57
SPG7-206ENST00000562775 NGEFQ8N5V2 710 aa18.6■□□□□ 0.57
SPG7-206ENST00000562775 FLT4P35916 1363 aa18.6■□□□□ 0.57
SPG7-206ENST00000562775 SLIT3O75094 1523 aa18.6■□□□□ 0.57
SPG7-206ENST00000562775 APAF1O14727 1248 aa18.59■□□□□ 0.57
SPG7-206ENST00000562775 USP19O94966 1318 aa18.59■□□□□ 0.57
SPG7-206ENST00000562775 AMPHP49418 695 aa18.59■□□□□ 0.57
SPG7-206ENST00000562775 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
SPG7-206ENST00000562775 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
SPG7-206ENST00000562775 TNS3Q68CZ2 1445 aa18.59■□□□□ 0.57
SPG7-206ENST00000562775 NFAT5O94916 1531 aa18.59■□□□□ 0.57
SPG7-206ENST00000562775 PDE3BQ13370 1112 aa18.58■□□□□ 0.56
SPG7-206ENST00000562775 HSP90AB2PQ58FF8 381 aa18.58■□□□□ 0.56
SPG7-206ENST00000562775 SOS2Q07890 1332 aaPredicted RBP18.57■□□□□ 0.56
SPG7-206ENST00000562775 SPATA31A3Q5VYP0 1347 aa18.57■□□□□ 0.56
SPG7-206ENST00000562775 FCHSD2O94868 740 aa18.57■□□□□ 0.56
SPG7-206ENST00000562775 EIF4A2Q14240 407 aaKnown RBP18.57■□□□□ 0.56
SPG7-206ENST00000562775 RTL1A6NKG5 1358 aa18.56■□□□□ 0.56
SPG7-206ENST00000562775 GCP02774 474 aa18.56■□□□□ 0.56
SPG7-206ENST00000562775 ARHGEF10O15013 1369 aa18.56■□□□□ 0.56
SPG7-206ENST00000562775 PLEKHF1Q96S99 279 aa18.55■□□□□ 0.56
SPG7-206ENST00000562775 NHSL1Q5SYE7 1610 aa18.55■□□□□ 0.56
SPG7-206ENST00000562775 HOXC9P31274 260 aa18.55■□□□□ 0.56
SPG7-206ENST00000562775 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
SPG7-206ENST00000562775 TCP11L2Q8N4U5 519 aa18.55■□□□□ 0.56
SPG7-206ENST00000562775 LTN1O94822 1766 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms