RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 SNPHO15079 494 aa6.08□□□□□ -1.44
TCF4-215ENST00000562638 HMGN5P82970 282 aaKnown RBP6.08□□□□□ -1.44
TCF4-215ENST00000562638 BECN1Q14457 450 aa6.08□□□□□ -1.44
TCF4-215ENST00000562638 TSGA10IPQ3SY00 556 aa6.08□□□□□ -1.44
TCF4-215ENST00000562638 NME8Q8N427 588 aa6.08□□□□□ -1.44
TCF4-215ENST00000562638 PDCD7Q8N8D1 485 aaKnown RBP6.08□□□□□ -1.44
TCF4-215ENST00000562638 TBC1D22AQ8WUA7 517 aa6.08□□□□□ -1.44
TCF4-215ENST00000562638 PAIP2Q9BPZ3 127 aaKnown RBP6.08□□□□□ -1.44
TCF4-215ENST00000562638 SMC3Q9UQE7 1217 aa6.08□□□□□ -1.44
TCF4-215ENST00000562638 RAD54L2Q9Y4B4 1467 aa6.08□□□□□ -1.44
TCF4-215ENST00000562638 KANK1Q14678 1352 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 CCDC196A0A1B0GTZ2 297 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 INHBEP58166 350 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 LRCH2Q5VUJ6 765 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 ARMCX6Q7L4S7 300 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 ANKRD7Q92527 254 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 TEX13AQ9BXU3 409 aaPredicted RBP6.07□□□□□ -1.44
TCF4-215ENST00000562638 CXorf56Q9H5V9 222 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 ANAPC4Q9UJX5 808 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 SUFUQ9UMX1 484 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 RIPOR2Q9Y4F9 1068 aa6.07□□□□□ -1.44
TCF4-215ENST00000562638 ANKRD18BA2A2Z9 1011 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 MPHOSPH10O00566 681 aaKnown RBP6.06□□□□□ -1.44
TCF4-215ENST00000562638 LIG1P18858 919 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 MSNP26038 577 aaKnown RBP6.06□□□□□ -1.44
TCF4-215ENST00000562638 DDX10Q13206 875 aaKnown RBP6.06□□□□□ -1.44
TCF4-215ENST00000562638 TERF2Q15554 542 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 CDC37Q16543 378 aaPredicted RBP6.06□□□□□ -1.44
TCF4-215ENST00000562638 MAP9Q49MG5 647 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 DNAJC21Q5F1R6 531 aaKnown RBP6.06□□□□□ -1.44
TCF4-215ENST00000562638 MUM1L1Q5H9M0 696 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 PDLIM2Q96JY6 352 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 FAM53CQ9NYF3 392 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 RSPH14Q9UHP6 348 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 ARHGAP31Q2M1Z3 1444 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 CEP162Q5TB80 1403 aa6.06□□□□□ -1.44
TCF4-215ENST00000562638 GOLGA6CA6NDK9 693 aa6.05□□□□□ -1.44
TCF4-215ENST00000562638 GOLGA6BA6NDN3 693 aa6.05□□□□□ -1.44
TCF4-215ENST00000562638 IPO7O95373 1038 aaKnown RBP6.05□□□□□ -1.44
TCF4-215ENST00000562638 GOLGA6DP0CG33 693 aa6.05□□□□□ -1.44
TCF4-215ENST00000562638 PAX7P23759 505 aa6.05□□□□□ -1.44
TCF4-215ENST00000562638 MCM4P33991 863 aa6.05□□□□□ -1.44
TCF4-215ENST00000562638 RASSF4Q9H2L5 321 aa6.05□□□□□ -1.44
TCF4-215ENST00000562638 GOLGA6AQ9NYA3 693 aa6.05□□□□□ -1.44
TCF4-215ENST00000562638 MYOM3Q5VTT5 1437 aa6.05□□□□□ -1.44
TCF4-215ENST00000562638 POTEB3A0JP26 581 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 REC8O95072 547 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 FAM163BP0C2L3 166 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 CT47B1P0C2W7 299 aaPredicted RBP6.04□□□□□ -1.44
TCF4-215ENST00000562638 POLD1P28340 1107 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 CASQ1P31415 396 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 CCT2P78371 535 aaKnown RBP6.04□□□□□ -1.44
TCF4-215ENST00000562638 BIRC2Q13490 618 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 SYCP1Q15431 976 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 POTEBQ6S5H4 581 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 NLRP13Q86W25 1043 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 SNRNP27Q8WVK2 155 aaKnown RBP6.04□□□□□ -1.44
TCF4-215ENST00000562638 ERCC4Q92889 916 aaPredicted RBP6.04□□□□□ -1.44
TCF4-215ENST00000562638 TNPO1Q92973 898 aaKnown RBP6.04□□□□□ -1.44
TCF4-215ENST00000562638 SIN3AQ96ST3 1273 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 SLX1AQ9BQ83 275 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 KDM4CQ9H3R0 1056 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 PANK3Q9H999 370 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 CEP126Q9P2H0 1117 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 ZKSCAN5Q9Y2L8 839 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 MORC2Q9Y6X9 1032 aaPredicted RBP6.04□□□□□ -1.44
TCF4-215ENST00000562638 NPC1L1Q9UHC9 1359 aa6.04□□□□□ -1.44
TCF4-215ENST00000562638 AKNAQ7Z591 1439 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 ATP2B1P20020 1258 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 SLC4A3P48751 1232 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 RAD51AP2Q09MP3 1159 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 CHAF1AQ13111 956 aaPredicted RBP6.03□□□□□ -1.44
TCF4-215ENST00000562638 ZRSR2Q15696 482 aaKnown RBP6.03□□□□□ -1.44
TCF4-215ENST00000562638 FOXD4L6Q3SYB3 417 aaPredicted RBP6.03□□□□□ -1.44
TCF4-215ENST00000562638 FOXD4L3Q6VB84 417 aaPredicted RBP6.03□□□□□ -1.44
TCF4-215ENST00000562638 CCDC91Q7Z6B0 441 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 SUGP1Q8IWZ8 645 aaKnown RBP6.03□□□□□ -1.44
TCF4-215ENST00000562638 PDCL2Q8N4E4 241 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 ZNF428Q96B54 188 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 NOL10Q9BSC4 688 aaKnown RBP6.03□□□□□ -1.44
TCF4-215ENST00000562638 NUCKS1Q9H1E3 243 aaKnown RBP6.03□□□□□ -1.44
TCF4-215ENST00000562638 ATG3Q9NT62 314 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 PHF8Q9UPP1 1060 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 WDR97A6NE52 1622 aa6.03□□□□□ -1.44
TCF4-215ENST00000562638 MAGEA8P43361 318 aa6.02□□□□□ -1.45
TCF4-215ENST00000562638 TNNT3P45378 269 aaPredicted RBP6.02□□□□□ -1.45
TCF4-215ENST00000562638 MKRN3Q13064 507 aaKnown RBP6.02□□□□□ -1.45
TCF4-215ENST00000562638 ZSCAN26Q16670 478 aa6.02□□□□□ -1.45
TCF4-215ENST00000562638 ZNF467Q7Z7K2 595 aaPredicted RBP6.02□□□□□ -1.45
TCF4-215ENST00000562638 HELBQ8NG08 1087 aaPredicted RBP6.02□□□□□ -1.45
TCF4-215ENST00000562638 TATDN2Q93075 761 aa6.02□□□□□ -1.45
TCF4-215ENST00000562638 L3MBTL3Q96JM7 780 aaPredicted RBP6.02□□□□□ -1.45
TCF4-215ENST00000562638 LARP6Q9BRS8 491 aaKnown RBP6.02□□□□□ -1.45
TCF4-215ENST00000562638 MTA3Q9BTC8 594 aa6.02□□□□□ -1.45
TCF4-215ENST00000562638 RANBP17Q9H2T7 1088 aaKnown RBP6.02□□□□□ -1.45
TCF4-215ENST00000562638 DDX41Q9UJV9 622 aaKnown RBP6.02□□□□□ -1.45
TCF4-215ENST00000562638 NUDCQ9Y266 331 aa6.02□□□□□ -1.45
TCF4-215ENST00000562638 DDX49Q9Y6V7 483 aaKnown RBP6.02□□□□□ -1.45
TCF4-215ENST00000562638 MAPKBP1O60336 1514 aa6.02□□□□□ -1.45
TCF4-215ENST00000562638 CTIFO43310 598 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms