RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
COMMD4-205ENST00000562310 SSH2Q76I76 1423 aa19.19■□□□□ 0.66
COMMD4-205ENST00000562310 TTC21AQ8NDW8 1320 aa19.19■□□□□ 0.66
COMMD4-205ENST00000562310 NGDNQ8NEJ9 315 aaKnown RBP19.18■□□□□ 0.66
COMMD4-205ENST00000562310 GGNBP2Q9H3C7 697 aa19.18■□□□□ 0.66
COMMD4-205ENST00000562310 LRRC7Q96NW7 1537 aa19.17■□□□□ 0.66
COMMD4-205ENST00000562310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.17■□□□□ 0.66
COMMD4-205ENST00000562310 TTC21BQ7Z4L5 1316 aa19.17■□□□□ 0.66
COMMD4-205ENST00000562310 MSH6P52701 1360 aa19.16■□□□□ 0.66
COMMD4-205ENST00000562310 SHPRHQ149N8 1683 aa19.15■□□□□ 0.66
COMMD4-205ENST00000562310 RBM33Q96EV2 1170 aaKnown RBP19.15■□□□□ 0.66
COMMD4-205ENST00000562310 CFAP53Q96M91 514 aa19.15■□□□□ 0.66
COMMD4-205ENST00000562310 PHF8Q9UPP1 1060 aa19.15■□□□□ 0.66
COMMD4-205ENST00000562310 PIK3C2AO00443 1686 aa19.14■□□□□ 0.66
COMMD4-205ENST00000562310 HNRNPUQ00839 825 aaKnown RBP eCLIP19.14■□□□□ 0.65
COMMD4-205ENST00000562310 PMFBP1Q8TBY8 1022 aa19.14■□□□□ 0.65
COMMD4-205ENST00000562310 CERKQ8TCT0 537 aa19.14■□□□□ 0.65
COMMD4-205ENST00000562310 OVOS2A0A0J9YW53 1432 aa19.14■□□□□ 0.65
COMMD4-205ENST00000562310 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-205ENST00000562310 OVOS2Q6IE36 1432 aa19.14■□□□□ 0.65
COMMD4-205ENST00000562310 C1orf167Q5SNV9 1468 aa19.14■□□□□ 0.65
COMMD4-205ENST00000562310 ATF3P18847 181 aa19.13■□□□□ 0.65
COMMD4-205ENST00000562310 WDR43Q15061 677 aaKnown RBP eCLIP19.13■□□□□ 0.65
COMMD4-205ENST00000562310 NME9Q86XW9 330 aa19.13■□□□□ 0.65
COMMD4-205ENST00000562310 COG3Q96JB2 828 aa19.13■□□□□ 0.65
COMMD4-205ENST00000562310 AATKQ6ZMQ8 1374 aa19.13■□□□□ 0.65
COMMD4-205ENST00000562310 MST1RQ04912 1400 aa19.13■□□□□ 0.65
COMMD4-205ENST00000562310 SMG6Q86US8 1419 aaKnown RBP19.13■□□□□ 0.65
COMMD4-205ENST00000562310 MAP2P11137 1827 aaKnown RBP19.12■□□□□ 0.65
COMMD4-205ENST00000562310 CADPS2Q86UW7 1296 aa19.12■□□□□ 0.65
COMMD4-205ENST00000562310 USP31Q70CQ4 1352 aa19.11■□□□□ 0.65
COMMD4-205ENST00000562310 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-205ENST00000562310 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-205ENST00000562310 ESCO1Q5FWF5 840 aa19.1■□□□□ 0.65
COMMD4-205ENST00000562310 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
COMMD4-205ENST00000562310 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
COMMD4-205ENST00000562310 MTHFSP49914 203 aa19.09■□□□□ 0.65
COMMD4-205ENST00000562310 COL3A1P02461 1466 aaPredicted RBP19.09■□□□□ 0.65
COMMD4-205ENST00000562310 TRPM3Q9HCF6 1732 aaPredicted RBP19.08■□□□□ 0.65
COMMD4-205ENST00000562310 MARF1Q9Y4F3 1742 aaKnown RBP19.08■□□□□ 0.65
COMMD4-205ENST00000562310 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
COMMD4-205ENST00000562310 PSME1Q06323 249 aa19.03■□□□□ 0.64
COMMD4-205ENST00000562310 ORAI2Q96SN7 254 aa19.02■□□□□ 0.64
COMMD4-205ENST00000562310 POLKQ9UBT6 870 aa19.02■□□□□ 0.64
COMMD4-205ENST00000562310 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
COMMD4-205ENST00000562310 ADAMTS8Q9UP79 889 aa19.02■□□□□ 0.64
COMMD4-205ENST00000562310 NUDCQ9Y266 331 aa19.02■□□□□ 0.64
COMMD4-205ENST00000562310 ALS2Q96Q42 1657 aa19.01■□□□□ 0.63
COMMD4-205ENST00000562310 LTBP4Q8N2S1 1624 aa19■□□□□ 0.63
COMMD4-205ENST00000562310 NPHP3Q7Z494 1330 aa18.99■□□□□ 0.63
COMMD4-205ENST00000562310 KIF24Q5T7B8 1368 aa18.98■□□□□ 0.63
COMMD4-205ENST00000562310 PAK3O75914 559 aaPredicted RBP18.98■□□□□ 0.63
COMMD4-205ENST00000562310 NLRP6P59044 892 aa18.98■□□□□ 0.63
COMMD4-205ENST00000562310 ABTB2Q8N961 1025 aa18.98■□□□□ 0.63
COMMD4-205ENST00000562310 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
COMMD4-205ENST00000562310 SBNO1A3KN83 1393 aa18.97■□□□□ 0.63
COMMD4-205ENST00000562310 PHRF1Q9P1Y6 1649 aaKnown RBP18.97■□□□□ 0.63
COMMD4-205ENST00000562310 SLIT3O75094 1523 aa18.97■□□□□ 0.63
COMMD4-205ENST00000562310 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
COMMD4-205ENST00000562310 NGEFQ8N5V2 710 aa18.97■□□□□ 0.63
COMMD4-205ENST00000562310 FOXO3O43524 673 aa18.96■□□□□ 0.63
COMMD4-205ENST00000562310 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
COMMD4-205ENST00000562310 PXDNQ92626 1479 aa18.96■□□□□ 0.63
COMMD4-205ENST00000562310 LTN1O94822 1766 aa18.96■□□□□ 0.63
COMMD4-205ENST00000562310 NFAT5O94916 1531 aa18.95■□□□□ 0.62
COMMD4-205ENST00000562310 KRT28Q7Z3Y7 464 aa18.95■□□□□ 0.62
COMMD4-205ENST00000562310 NHSL1Q5SYE7 1610 aa18.95■□□□□ 0.62
COMMD4-205ENST00000562310 RTL1A6NKG5 1358 aa18.94■□□□□ 0.62
COMMD4-205ENST00000562310 FLT4P35916 1363 aa18.93■□□□□ 0.62
COMMD4-205ENST00000562310 IQSEC2Q5JU85 1478 aa18.93■□□□□ 0.62
COMMD4-205ENST00000562310 PPM1GO15355 546 aaPredicted RBP18.93■□□□□ 0.62
COMMD4-205ENST00000562310 RRS1Q15050 365 aaKnown RBP18.93■□□□□ 0.62
COMMD4-205ENST00000562310 MED1Q15648 1581 aaPredicted RBP18.93■□□□□ 0.62
COMMD4-205ENST00000562310 TNS3Q68CZ2 1445 aa18.92■□□□□ 0.62
COMMD4-205ENST00000562310 U2AF1L5P0DN76 240 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-205ENST00000562310 U2AF1Q01081 240 aaKnown RBP eCLIP18.92■□□□□ 0.62
COMMD4-205ENST00000562310 KCNH5Q8NCM2 988 aa18.92■□□□□ 0.62
COMMD4-205ENST00000562310 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
COMMD4-205ENST00000562310 PNNQ9H307 717 aaKnown RBP18.92■□□□□ 0.62
COMMD4-205ENST00000562310 SLAIN2Q9P270 581 aa18.92■□□□□ 0.62
COMMD4-205ENST00000562310 USP19O94966 1318 aa18.92■□□□□ 0.62
COMMD4-205ENST00000562310 PDE3BQ13370 1112 aa18.91■□□□□ 0.62
COMMD4-205ENST00000562310 BRINP3Q76B58 766 aa18.91■□□□□ 0.62
COMMD4-205ENST00000562310 MAP3K19Q56UN5 1328 aa18.91■□□□□ 0.62
COMMD4-205ENST00000562310 RGPD1P0DJD0 1748 aa18.91■□□□□ 0.62
COMMD4-205ENST00000562310 U2SURPO15042 1029 aaKnown RBP18.9■□□□□ 0.62
COMMD4-205ENST00000562310 ARHGEF10O15013 1369 aa18.9■□□□□ 0.62
COMMD4-205ENST00000562310 CRYBG1Q9Y4K1 1723 aa18.89■□□□□ 0.61
COMMD4-205ENST00000562310 FBLN1P23142 703 aa18.89■□□□□ 0.61
COMMD4-205ENST00000562310 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
COMMD4-205ENST00000562310 IL13P35225 146 aa18.88■□□□□ 0.61
COMMD4-205ENST00000562310 XPCQ01831 940 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-205ENST00000562310 NUTM2GQ5VZR2 741 aa18.88■□□□□ 0.61
COMMD4-205ENST00000562310 CCDC146Q8IYE0 955 aa18.88■□□□□ 0.61
COMMD4-205ENST00000562310 AMPHP49418 695 aa18.87■□□□□ 0.61
COMMD4-205ENST00000562310 ABCC6O95255 1503 aa18.86■□□□□ 0.61
COMMD4-205ENST00000562310 SOX12O15370 315 aa18.86■□□□□ 0.61
COMMD4-205ENST00000562310 FCHSD2O94868 740 aa18.86■□□□□ 0.61
COMMD4-205ENST00000562310 SPATA31A3Q5VYP0 1347 aa18.85■□□□□ 0.61
COMMD4-205ENST00000562310 MAPK8IP3Q9UPT6 1336 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms