RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 S1PR4O95977 384 aa8.78□□□□□ -1
CNOT1-203ENST00000562046 CTHP32929 405 aa8.78□□□□□ -1
CNOT1-203ENST00000562046 VAC14Q08AM6 782 aa8.78□□□□□ -1
CNOT1-203ENST00000562046 PTCRAQ6ISU1 281 aaPredicted RBP8.78□□□□□ -1
CNOT1-203ENST00000562046 ZC3H4Q9UPT8 1303 aaKnown RBP8.78□□□□□ -1
CNOT1-203ENST00000562046 ARXQ96QS3 562 aa8.77□□□□□ -1.01
CNOT1-203ENST00000562046 KCNC4Q03721 635 aa8.76□□□□□ -1.01
CNOT1-203ENST00000562046 PNMA1Q8ND90 353 aa8.76□□□□□ -1.01
CNOT1-203ENST00000562046 GLMNQ92990 594 aa8.76□□□□□ -1.01
CNOT1-203ENST00000562046 FBXO45P0C2W1 286 aa8.75□□□□□ -1.01
CNOT1-203ENST00000562046 ARID3AQ99856 593 aa8.75□□□□□ -1.01
CNOT1-203ENST00000562046 ALG2Q9H553 416 aa8.75□□□□□ -1.01
CNOT1-203ENST00000562046 NR1H3Q13133 447 aa8.74□□□□□ -1.01
CNOT1-203ENST00000562046 MMRN1Q13201 1228 aa8.74□□□□□ -1.01
CNOT1-203ENST00000562046 HDGFL1Q5TGJ6 251 aa8.74□□□□□ -1.01
CNOT1-203ENST00000562046 ARMC2Q8NEN0 867 aa8.74□□□□□ -1.01
CNOT1-203ENST00000562046 GPKOWQ92917 476 aaPredicted RBP eCLIP8.74□□□□□ -1.015e-7■□□□□ 9.3
CNOT1-203ENST00000562046 OCSTAMPQ9BR26 566 aa8.74□□□□□ -1.01
CNOT1-203ENST00000562046 UNC93B1Q9H1C4 597 aa8.74□□□□□ -1.01
CNOT1-203ENST00000562046 ZBBXA8MT70 800 aa8.73□□□□□ -1.01
CNOT1-203ENST00000562046 PDXDC2PQ6P474 469 aa8.73□□□□□ -1.01
CNOT1-203ENST00000562046 CCDC24Q8N4L8 307 aa8.73□□□□□ -1.01
CNOT1-203ENST00000562046 CALR3Q96L12 384 aaKnown RBP8.73□□□□□ -1.01
CNOT1-203ENST00000562046 SERPINA10Q9UK55 444 aa8.73□□□□□ -1.01
CNOT1-203ENST00000562046 FCF1Q9Y324 198 aaKnown RBP8.73□□□□□ -1.01
CNOT1-203ENST00000562046 GPSM3Q9Y4H4 160 aa8.72□□□□□ -1.01
CNOT1-203ENST00000562046 RNF223E7ERA6 249 aa8.71□□□□□ -1.02
CNOT1-203ENST00000562046 PPEF1O14829 653 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-203ENST00000562046 SOX11P35716 441 aa8.71□□□□□ -1.02
CNOT1-203ENST00000562046 NBPF14Q5TI25 921 aa8.7□□□□□ -1.02
CNOT1-203ENST00000562046 SH3BP5LQ7L8J4 393 aa8.7□□□□□ -1.02
CNOT1-203ENST00000562046 CCDC97Q96F63 343 aaPredicted RBP8.7□□□□□ -1.02
CNOT1-203ENST00000562046 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
CNOT1-203ENST00000562046 EIF4G2P78344 907 aaKnown RBP eCLIP8.68□□□□□ -1.02
CNOT1-203ENST00000562046 PTK2Q05397 1052 aa8.68□□□□□ -1.02
CNOT1-203ENST00000562046 SH3RF1Q7Z6J0 888 aa8.68□□□□□ -1.02
CNOT1-203ENST00000562046 ANKLE1Q8NAG6 615 aa8.68□□□□□ -1.02
CNOT1-203ENST00000562046 BAP1Q92560 729 aa8.68□□□□□ -1.02
CNOT1-203ENST00000562046 UCN2Q96RP3 112 aa8.68□□□□□ -1.02
CNOT1-203ENST00000562046 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
CNOT1-203ENST00000562046 HOMEZQ8IX15 550 aa8.67□□□□□ -1.02
CNOT1-203ENST00000562046 SEMA3FQ13275 785 aa8.66□□□□□ -1.02
CNOT1-203ENST00000562046 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
CNOT1-203ENST00000562046 C4orf48Q5BLP8 95 aa8.65□□□□□ -1.02
CNOT1-203ENST00000562046 IFFO2Q5TF58 517 aa8.65□□□□□ -1.02
CNOT1-203ENST00000562046 ZNF511Q8NB15 262 aa8.65□□□□□ -1.02
CNOT1-203ENST00000562046 ADAM32Q8TC27 787 aa8.65□□□□□ -1.02
CNOT1-203ENST00000562046 ARHGAP9Q9BRR9 750 aa8.65□□□□□ -1.02
CNOT1-203ENST00000562046 GGCXP38435 758 aa8.64□□□□□ -1.03
CNOT1-203ENST00000562046 LINC01559Q495D7 138 aa8.64□□□□□ -1.03
CNOT1-203ENST00000562046 CFAP70Q5T0N1 1121 aa8.64□□□□□ -1.03
CNOT1-203ENST00000562046 FOXJ1Q92949 421 aa8.64□□□□□ -1.03
CNOT1-203ENST00000562046 PPP1R12CQ9BZL4 782 aa8.64□□□□□ -1.03
CNOT1-203ENST00000562046 SH3BP2P78314 561 aa8.63□□□□□ -1.03
CNOT1-203ENST00000562046 EMID1Q96A84 441 aaPredicted RBP8.63□□□□□ -1.03
CNOT1-203ENST00000562046 PALM3A6NDB9 673 aaPredicted RBP8.62□□□□□ -1.03
CNOT1-203ENST00000562046 SRPK2P78362 688 aaKnown RBP8.62□□□□□ -1.03
CNOT1-203ENST00000562046 BPHLQ86WA6 291 aaPredicted RBP8.62□□□□□ -1.03
CNOT1-203ENST00000562046 C1QTNF2Q9BXJ5 285 aa8.62□□□□□ -1.03
CNOT1-203ENST00000562046 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-203ENST00000562046 TRIM32Q13049 653 aa8.61□□□□□ -1.03
CNOT1-203ENST00000562046 TBC1D9Q6ZT07 1266 aa8.61□□□□□ -1.03
CNOT1-203ENST00000562046 PHTF2Q8N3S3 785 aa8.61□□□□□ -1.03
CNOT1-203ENST00000562046 CEP126Q9P2H0 1117 aa8.61□□□□□ -1.03
CNOT1-203ENST00000562046 PIK3CDO00329 1044 aa8.6□□□□□ -1.03
CNOT1-203ENST00000562046 RPIAP49247 311 aa8.6□□□□□ -1.03
CNOT1-203ENST00000562046 SKOR1P84550 965 aa8.6□□□□□ -1.03
CNOT1-203ENST00000562046 ERFEQ4G0M1 354 aa8.6□□□□□ -1.03
CNOT1-203ENST00000562046 ZBTB33Q86T24 672 aa8.6□□□□□ -1.03
CNOT1-203ENST00000562046 TFIP11Q9UBB9 837 aaKnown RBP8.6□□□□□ -1.03
CNOT1-203ENST00000562046 PCDHB9Q9Y5E1 797 aa8.6□□□□□ -1.03
CNOT1-203ENST00000562046 MAGEB6P1A0A0J9YX57 407 aa8.59□□□□□ -1.03
CNOT1-203ENST00000562046 ZBTB24O43167 697 aaPredicted RBP8.59□□□□□ -1.03
CNOT1-203ENST00000562046 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
CNOT1-203ENST00000562046 NFATC2IPQ8NCF5 419 aa8.59□□□□□ -1.03
CNOT1-203ENST00000562046 FAM174AQ8TBP5 190 aa8.59□□□□□ -1.03
CNOT1-203ENST00000562046 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
CNOT1-203ENST00000562046 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
CNOT1-203ENST00000562046 MAFBQ9Y5Q3 323 aaPredicted RBP8.59□□□□□ -1.03
CNOT1-203ENST00000562046 ATP9BO43861 1147 aa8.58□□□□□ -1.04
CNOT1-203ENST00000562046 ZNF592Q92610 1267 aa8.58□□□□□ -1.04
CNOT1-203ENST00000562046 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-203ENST00000562046 WNT7BP56706 349 aa8.57□□□□□ -1.04
CNOT1-203ENST00000562046 TRMT44Q8IYL2 757 aaKnown RBP8.57□□□□□ -1.04
CNOT1-203ENST00000562046 RFX1P22670 979 aa8.56□□□□□ -1.04
CNOT1-203ENST00000562046 LMOD1P29536 600 aaPredicted RBP8.56□□□□□ -1.04
CNOT1-203ENST00000562046 AGERQ15109 404 aa8.56□□□□□ -1.04
CNOT1-203ENST00000562046 DZIP3Q86Y13 1208 aaKnown RBP8.56□□□□□ -1.04
CNOT1-203ENST00000562046 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-203ENST00000562046 PBXIP1Q96AQ6 731 aa8.55□□□□□ -1.04
CNOT1-203ENST00000562046 ESPNB1AK53 854 aa8.54□□□□□ -1.04
CNOT1-203ENST00000562046 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
CNOT1-203ENST00000562046 VARSP26640 1264 aaKnown RBP8.54□□□□□ -1.04
CNOT1-203ENST00000562046 CD2BP2O95400 341 aaKnown RBP8.53□□□□□ -1.04
CNOT1-203ENST00000562046 SKIP12755 728 aa8.53□□□□□ -1.04
CNOT1-203ENST00000562046 SLFNL1Q499Z3 407 aa8.53□□□□□ -1.04
CNOT1-203ENST00000562046 KANK4Q5T7N3 995 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-203ENST00000562046 TRAF7Q6Q0C0 670 aa8.53□□□□□ -1.04
CNOT1-203ENST00000562046 PLEKHM2Q8IWE5 1019 aa8.53□□□□□ -1.04
CNOT1-203ENST00000562046 SLC10A4Q96EP9 437 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms