RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 C14orf37Q86TY3 774 aa12.82□□□□□ -0.36
SMG1-204ENST00000561940 EPS8L1Q8TE68 723 aa12.82□□□□□ -0.36
SMG1-204ENST00000561940 SH3BP2P78314 561 aa12.81□□□□□ -0.36
SMG1-204ENST00000561940 PKD2L1Q9P0L9 805 aa12.81□□□□□ -0.36
SMG1-204ENST00000561940 GDF9O60383 454 aa12.79□□□□□ -0.36
SMG1-204ENST00000561940 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
SMG1-204ENST00000561940 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
SMG1-204ENST00000561940 ZNF511Q8NB15 262 aa12.77□□□□□ -0.37
SMG1-204ENST00000561940 WNT7BP56706 349 aa12.76□□□□□ -0.37
SMG1-204ENST00000561940 FOXJ1Q92949 421 aa12.76□□□□□ -0.37
SMG1-204ENST00000561940 MRGPRX2Q96LB1 330 aa12.76□□□□□ -0.37
SMG1-204ENST00000561940 WNT7AO00755 349 aa12.74□□□□□ -0.37
SMG1-204ENST00000561940 AGERQ15109 404 aa12.74□□□□□ -0.37
SMG1-204ENST00000561940 EHBP1Q8NDI1 1231 aa12.74□□□□□ -0.37
SMG1-204ENST00000561940 ERICH6Q7L0X2 663 aa12.72□□□□□ -0.37
SMG1-204ENST00000561940 BANK1Q8NDB2 785 aa12.72□□□□□ -0.37
SMG1-204ENST00000561940 ARMC2Q8NEN0 867 aa12.72□□□□□ -0.37
SMG1-204ENST00000561940 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
SMG1-204ENST00000561940 CYP4X1Q8N118 509 aa12.71□□□□□ -0.37
SMG1-204ENST00000561940 FKBPLQ9UIM3 349 aa12.71□□□□□ -0.37
SMG1-204ENST00000561940 TTC24A2A3L6 582 aaPredicted RBP12.7□□□□□ -0.38
SMG1-204ENST00000561940 PRR20EP86478 221 aa12.7□□□□□ -0.38
SMG1-204ENST00000561940 PRR20CP86479 221 aa12.7□□□□□ -0.38
SMG1-204ENST00000561940 PRR20DP86480 221 aa12.7□□□□□ -0.38
SMG1-204ENST00000561940 PRR20BP86481 221 aa12.7□□□□□ -0.38
SMG1-204ENST00000561940 PRR20AP86496 221 aa12.7□□□□□ -0.38
SMG1-204ENST00000561940 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
SMG1-204ENST00000561940 NRG2O14511 850 aaPredicted RBP12.69□□□□□ -0.38
SMG1-204ENST00000561940 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
SMG1-204ENST00000561940 MAGEB6P1A0A0J9YX57 407 aa12.68□□□□□ -0.38
SMG1-204ENST00000561940 C4orf48Q5BLP8 95 aa12.68□□□□□ -0.38
SMG1-204ENST00000561940 NBPF14Q5TI25 921 aa12.68□□□□□ -0.38
SMG1-204ENST00000561940 CARD14Q9BXL6 1004 aa12.67□□□□□ -0.38
SMG1-204ENST00000561940 FAM187AA6NFU0 413 aa12.66□□□□□ -0.38
SMG1-204ENST00000561940 J3QL48 77 aa12.66□□□□□ -0.38
SMG1-204ENST00000561940 Q6ZNB5 142 aa12.66□□□□□ -0.38
SMG1-204ENST00000561940 BPHLQ86WA6 291 aaPredicted RBP12.66□□□□□ -0.38
SMG1-204ENST00000561940 SNIP1Q8TAD8 396 aaKnown RBP12.66□□□□□ -0.38
SMG1-204ENST00000561940 TOR4AQ9NXH8 423 aa12.66□□□□□ -0.38
SMG1-204ENST00000561940 SIAH2O43255 324 aa12.65□□□□□ -0.38
SMG1-204ENST00000561940 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
SMG1-204ENST00000561940 ALDH1A1P00352 501 aa12.64□□□□□ -0.39
SMG1-204ENST00000561940 VARSP26640 1264 aaKnown RBP12.64□□□□□ -0.39
SMG1-204ENST00000561940 TLL2Q9Y6L7 1015 aa12.64□□□□□ -0.39
SMG1-204ENST00000561940 ARID5BQ14865 1188 aa12.63□□□□□ -0.39
SMG1-204ENST00000561940 PDXDC2PQ6P474 469 aa12.63□□□□□ -0.39
SMG1-204ENST00000561940 SH3BP5LQ7L8J4 393 aa12.63□□□□□ -0.39
SMG1-204ENST00000561940 PKDCCQ504Y2 493 aa12.62□□□□□ -0.39
SMG1-204ENST00000561940 ARHGAP9Q9BRR9 750 aa12.62□□□□□ -0.39
SMG1-204ENST00000561940 SH3RF1Q7Z6J0 888 aa12.61□□□□□ -0.39
SMG1-204ENST00000561940 PNMA1Q8ND90 353 aa12.61□□□□□ -0.39
SMG1-204ENST00000561940 FAM174AQ8TBP5 190 aa12.61□□□□□ -0.39
SMG1-204ENST00000561940 GPKOWQ92917 476 aaPredicted RBP eCLIP12.61□□□□□ -0.39
SMG1-204ENST00000561940 SMPD1P17405 629 aa12.6□□□□□ -0.39
SMG1-204ENST00000561940 PTK2Q05397 1052 aa12.59□□□□□ -0.39
SMG1-204ENST00000561940 ZBTB33Q86T24 672 aa12.59□□□□□ -0.39
SMG1-204ENST00000561940 OCSTAMPQ9BR26 566 aa12.59□□□□□ -0.39
SMG1-204ENST00000561940 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
SMG1-204ENST00000561940 MCM6Q14566 821 aa12.58□□□□□ -0.4
SMG1-204ENST00000561940 NDUFB9Q9Y6M9 179 aa12.58□□□□□ -0.4
SMG1-204ENST00000561940 ZC3H4Q9UPT8 1303 aaKnown RBP12.58□□□□□ -0.4
SMG1-204ENST00000561940 ERFEQ4G0M1 354 aa12.57□□□□□ -0.4
SMG1-204ENST00000561940 WASF2Q9Y6W5 498 aa12.57□□□□□ -0.4
SMG1-204ENST00000561940 DGAT1O75907 488 aa12.56□□□□□ -0.4
SMG1-204ENST00000561940 ADAM32Q8TC27 787 aa12.56□□□□□ -0.4
SMG1-204ENST00000561940 APBB1O00213 710 aa12.55□□□□□ -0.4
SMG1-204ENST00000561940 HPS1Q92902 700 aa12.55□□□□□ -0.4
SMG1-204ENST00000561940 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
SMG1-204ENST00000561940 C1QTNF2Q9BXJ5 285 aa12.54□□□□□ -0.4
SMG1-204ENST00000561940 GPR37L1O60883 481 aa12.53□□□□□ -0.4
SMG1-204ENST00000561940 SUPT5HO00267 1087 aaKnown RBP12.52□□□□□ -0.41
SMG1-204ENST00000561940 FBXO45P0C2W1 286 aa12.52□□□□□ -0.41
SMG1-204ENST00000561940 ABL2P42684 1182 aa12.52□□□□□ -0.41
SMG1-204ENST00000561940 TRAF7Q6Q0C0 670 aa12.52□□□□□ -0.41
SMG1-204ENST00000561940 GPSM3Q9Y4H4 160 aa12.52□□□□□ -0.41
SMG1-204ENST00000561940 ZBBXA8MT70 800 aa12.51□□□□□ -0.41
SMG1-204ENST00000561940 SOCS7O14512 581 aa12.51□□□□□ -0.41
SMG1-204ENST00000561940 LCE2BO14633 110 aa12.51□□□□□ -0.41
SMG1-204ENST00000561940 MYT1Q01538 1121 aa12.51□□□□□ -0.41
SMG1-204ENST00000561940 VASH1Q7L8A9 365 aaPredicted RBP12.51□□□□□ -0.41
SMG1-204ENST00000561940 PRM3Q9NNZ6 103 aa12.51□□□□□ -0.41
SMG1-204ENST00000561940 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
SMG1-204ENST00000561940 CDK15Q96Q40 435 aa12.5□□□□□ -0.41
SMG1-204ENST00000561940 ST8SIA5O15466 376 aa12.49□□□□□ -0.41
SMG1-204ENST00000561940 GRM5P41594 1212 aa12.49□□□□□ -0.41
SMG1-204ENST00000561940 MPNDQ8N594 471 aa12.49□□□□□ -0.41
SMG1-204ENST00000561940 SLC10A4Q96EP9 437 aa12.49□□□□□ -0.41
SMG1-204ENST00000561940 ADH1CP00326 375 aa12.48□□□□□ -0.41
SMG1-204ENST00000561940 FLIIQ13045 1269 aa12.48□□□□□ -0.41
SMG1-204ENST00000561940 NNTQ13423 1086 aa12.48□□□□□ -0.41
SMG1-204ENST00000561940 DZIP3Q86Y13 1208 aaKnown RBP12.48□□□□□ -0.41
SMG1-204ENST00000561940 TRMT44Q8IYL2 757 aaKnown RBP12.48□□□□□ -0.41
SMG1-204ENST00000561940 IRF5Q13568 498 aa12.47□□□□□ -0.41
SMG1-204ENST00000561940 COG6Q9Y2V7 657 aa12.47□□□□□ -0.41
SMG1-204ENST00000561940 PCDHB9Q9Y5E1 797 aa12.47□□□□□ -0.41
SMG1-204ENST00000561940 UBTFP17480 764 aaKnown RBP12.46□□□□□ -0.41
SMG1-204ENST00000561940 FSHRP23945 695 aa12.46□□□□□ -0.41
SMG1-204ENST00000561940 RAB15P59190 212 aa12.46□□□□□ -0.41
SMG1-204ENST00000561940 NR1H3Q13133 447 aa12.46□□□□□ -0.41
SMG1-204ENST00000561940 AVPP01185 164 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms