RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SMPD1P17405 629 aa6.02□□□□□ -1.45
SPG11-225ENST00000561391 FECHP22830 423 aa6.02□□□□□ -1.45
SPG11-225ENST00000561391 FAM160A2Q8N612 972 aaPredicted RBP6.02□□□□□ -1.45
SPG11-225ENST00000561391 ZC3H15Q8WU90 426 aaKnown RBP6.02□□□□□ -1.45
SPG11-225ENST00000561391 KIFC2Q96AC6 838 aa6.02□□□□□ -1.45
SPG11-225ENST00000561391 SLC27A5Q9Y2P5 690 aa6.02□□□□□ -1.45
SPG11-225ENST00000561391 MAPKBP1O60336 1514 aa6.02□□□□□ -1.45
SPG11-225ENST00000561391 TOP2BQ02880 1626 aa6.02□□□□□ -1.45
SPG11-225ENST00000561391 PRDM2Q13029 1718 aa6.02□□□□□ -1.45
SPG11-225ENST00000561391 TRIM32Q13049 653 aa6.01□□□□□ -1.45
SPG11-225ENST00000561391 HIC1Q14526 733 aa6.01□□□□□ -1.45
SPG11-225ENST00000561391 GPIHBP1Q8IV16 184 aa6.01□□□□□ -1.45
SPG11-225ENST00000561391 SLC16A10Q8TF71 515 aa6.01□□□□□ -1.45
SPG11-225ENST00000561391 REPIN1Q9BWE0 567 aaKnown RBP6.01□□□□□ -1.45
SPG11-225ENST00000561391 TTBK1Q5TCY1 1321 aaPredicted RBP6□□□□□ -1.45
SPG11-225ENST00000561391 J3QL48 77 aa6□□□□□ -1.45
SPG11-225ENST00000561391 MSS51Q4VC12 460 aa6□□□□□ -1.45
SPG11-225ENST00000561391 SULF1Q8IWU6 871 aa6□□□□□ -1.45
SPG11-225ENST00000561391 MRGPRX2Q96LB1 330 aa6□□□□□ -1.45
SPG11-225ENST00000561391 DAXXQ9UER7 740 aaPredicted RBP6□□□□□ -1.45
SPG11-225ENST00000561391 GRIPAP1Q4V328 841 aa5.99□□□□□ -1.45
SPG11-225ENST00000561391 RNF19BQ6ZMZ0 732 aa5.99□□□□□ -1.45
SPG11-225ENST00000561391 SALL2Q9Y467 1007 aaPredicted RBP5.99□□□□□ -1.45
SPG11-225ENST00000561391 KCTD17Q8N5Z5 321 aa5.98□□□□□ -1.45
SPG11-225ENST00000561391 HPS1Q92902 700 aa5.98□□□□□ -1.45
SPG11-225ENST00000561391 GCGRP47871 477 aa5.97□□□□□ -1.45
SPG11-225ENST00000561391 BRICD5Q6PL45 260 aa5.97□□□□□ -1.45
SPG11-225ENST00000561391 KRI1Q8N9T8 703 aaKnown RBP5.97□□□□□ -1.45
SPG11-225ENST00000561391 NLRP7Q8WX94 980 aa5.97□□□□□ -1.45
SPG11-225ENST00000561391 CCDC88BA6NC98 1476 aa5.96□□□□□ -1.45
SPG11-225ENST00000561391 PTPRMP28827 1452 aa5.96□□□□□ -1.45
SPG11-225ENST00000561391 GRIN2AQ12879 1464 aa5.96□□□□□ -1.45
SPG11-225ENST00000561391 FGD5Q6ZNL6 1462 aa5.96□□□□□ -1.45
SPG11-225ENST00000561391 Q3C1V9 767 aa5.96□□□□□ -1.46
SPG11-225ENST00000561391 CCDC24Q8N4L8 307 aa5.96□□□□□ -1.46
SPG11-225ENST00000561391 ADCY10Q96PN6 1610 aa5.96□□□□□ -1.46
SPG11-225ENST00000561391 PPRC1Q5VV67 1664 aaKnown RBP5.95□□□□□ -1.46
SPG11-225ENST00000561391 GNPATO15228 680 aa5.95□□□□□ -1.46
SPG11-225ENST00000561391 ZMYND10O75800 440 aa5.95□□□□□ -1.46
SPG11-225ENST00000561391 PCF11O94913 1555 aaKnown RBP5.95□□□□□ -1.46
SPG11-225ENST00000561391 NUP160Q12769 1436 aa5.95□□□□□ -1.46
SPG11-225ENST00000561391 XP32Q5T750 250 aa5.95□□□□□ -1.46
SPG11-225ENST00000561391 IRF7Q92985 503 aa5.95□□□□□ -1.46
SPG11-225ENST00000561391 SLC24A3Q9HC58 644 aa5.95□□□□□ -1.46
SPG11-225ENST00000561391 NXF1Q9UBU9 619 aaKnown RBP5.95□□□□□ -1.46
SPG11-225ENST00000561391 WDR97A6NE52 1622 aa5.95□□□□□ -1.46
SPG11-225ENST00000561391 SHROOM2Q13796 1616 aa5.95□□□□□ -1.46
SPG11-225ENST00000561391 TOP2AP11388 1531 aaKnown RBP5.94□□□□□ -1.46
SPG11-225ENST00000561391 GMPRP36959 345 aa5.94□□□□□ -1.46
SPG11-225ENST00000561391 PBRM1Q86U86 1689 aa5.94□□□□□ -1.46
SPG11-225ENST00000561391 ALDH1A1P00352 501 aa5.93□□□□□ -1.46
SPG11-225ENST00000561391 BMP1P13497 986 aa5.93□□□□□ -1.46
SPG11-225ENST00000561391 LORP23490 312 aaPredicted RBP5.93□□□□□ -1.46
SPG11-225ENST00000561391 MMP16P51512 607 aa5.93□□□□□ -1.46
SPG11-225ENST00000561391 RC3H1Q5TC82 1133 aaKnown RBP5.93□□□□□ -1.46
SPG11-225ENST00000561391 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
SPG11-225ENST00000561391 VEGFBP49765 207 aa5.92□□□□□ -1.46
SPG11-225ENST00000561391 BARGINQ6ZT62 677 aa5.92□□□□□ -1.46
SPG11-225ENST00000561391 USB1Q9BQ65 265 aaKnown RBP5.92□□□□□ -1.46
SPG11-225ENST00000561391 ARID4BQ4LE39 1312 aaPredicted RBP5.92□□□□□ -1.46
SPG11-225ENST00000561391 ASXL2Q76L83 1435 aa5.91□□□□□ -1.46
SPG11-225ENST00000561391 WNT7BP56706 349 aa5.91□□□□□ -1.46
SPG11-225ENST00000561391 WASF2Q9Y6W5 498 aa5.91□□□□□ -1.46
SPG11-225ENST00000561391 KIF21BO75037 1637 aa5.9□□□□□ -1.46
SPG11-225ENST00000561391 CAPN5O15484 640 aaPredicted RBP5.9□□□□□ -1.46
SPG11-225ENST00000561391 DXOO77932 396 aaKnown RBP5.9□□□□□ -1.46
SPG11-225ENST00000561391 SKOR1P84550 965 aa5.9□□□□□ -1.46
SPG11-225ENST00000561391 NPAS3Q8IXF0 933 aa5.9□□□□□ -1.46
SPG11-225ENST00000561391 EHBP1Q8NDI1 1231 aa5.9□□□□□ -1.46
SPG11-225ENST00000561391 TEX14Q8IWB6 1497 aa5.9□□□□□ -1.47
SPG11-225ENST00000561391 GPR37O15354 613 aa5.89□□□□□ -1.47
SPG11-225ENST00000561391 GLI2P10070 1586 aa5.89□□□□□ -1.47
SPG11-225ENST00000561391 UBAP1LF5GYI3 381 aa5.88□□□□□ -1.47
SPG11-225ENST00000561391 AK7Q96M32 723 aa5.88□□□□□ -1.47
SPG11-225ENST00000561391 PLB1Q6P1J6 1458 aa5.88□□□□□ -1.47
SPG11-225ENST00000561391 H3BM21 787 aa5.87□□□□□ -1.47
SPG11-225ENST00000561391 KDM4AO75164 1064 aa5.87□□□□□ -1.47
SPG11-225ENST00000561391 KCNMA1Q12791 1236 aa5.87□□□□□ -1.47
SPG11-225ENST00000561391 TRIM46Q7Z4K8 759 aa5.87□□□□□ -1.47
SPG11-225ENST00000561391 PHOX2BQ99453 314 aa5.87□□□□□ -1.47
SPG11-225ENST00000561391 ADAMTSL3P82987 1691 aa5.87□□□□□ -1.47
SPG11-225ENST00000561391 CUX1P39880 1505 aa5.86□□□□□ -1.47
SPG11-225ENST00000561391 FHAD1B1AJZ9 1412 aa5.86□□□□□ -1.47
SPG11-225ENST00000561391 PTPRGP23470 1445 aa5.86□□□□□ -1.47
SPG11-225ENST00000561391 MINK1Q8N4C8 1332 aaPredicted RBP5.86□□□□□ -1.47
SPG11-225ENST00000561391 IRF6O14896 467 aa5.86□□□□□ -1.47
SPG11-225ENST00000561391 NEUROD2Q15784 382 aa5.86□□□□□ -1.47
SPG11-225ENST00000561391 EPRSP07814 1512 aaKnown RBP5.85□□□□□ -1.47
SPG11-225ENST00000561391 ERBB4Q15303 1308 aa5.85□□□□□ -1.47
SPG11-225ENST00000561391 CD46P15529 392 aa5.85□□□□□ -1.47
SPG11-225ENST00000561391 HSPA1LP34931 641 aa5.85□□□□□ -1.47
SPG11-225ENST00000561391 MAP2K5Q13163 448 aa5.85□□□□□ -1.47
SPG11-225ENST00000561391 TMEM151AQ8N4L1 468 aa5.85□□□□□ -1.47
SPG11-225ENST00000561391 HLA-CQ95604 372 aa5.85□□□□□ -1.47
SPG11-225ENST00000561391 ADAMTS12P58397 1594 aa5.84□□□□□ -1.47
SPG11-225ENST00000561391 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
SPG11-225ENST00000561391 TRIM66O15016 1216 aa5.84□□□□□ -1.47
SPG11-225ENST00000561391 JUNDP17535 347 aa5.84□□□□□ -1.47
SPG11-225ENST00000561391 USP46P62068 366 aa5.84□□□□□ -1.47
SPG11-225ENST00000561391 CCDC102AQ96A19 550 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms