RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TMEM121BQ9BXQ6 578 aaPredicted RBP8.52□□□□□ -1.05
HERC1-213ENST00000561359 ASXL1Q8IXJ9 1541 aa8.52□□□□□ -1.05
HERC1-213ENST00000561359 ATRNO75882 1429 aa8.52□□□□□ -1.05
HERC1-213ENST00000561359 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.51□□□□□ -1.05
HERC1-213ENST00000561359 SLC52A1Q9NWF4 448 aa8.51□□□□□ -1.05
HERC1-213ENST00000561359 KANK1Q14678 1352 aa8.5□□□□□ -1.05
HERC1-213ENST00000561359 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
HERC1-213ENST00000561359 EIF2AK4Q9P2K8 1649 aaKnown RBP8.5□□□□□ -1.05
HERC1-213ENST00000561359 EHBP1L1Q8N3D4 1523 aa8.49□□□□□ -1.05
HERC1-213ENST00000561359 ARHGEF5Q12774 1597 aa8.49□□□□□ -1.05
HERC1-213ENST00000561359 RIMS2Q9UQ26 1411 aa8.49□□□□□ -1.05
HERC1-213ENST00000561359 GJD4Q96KN9 370 aaPredicted RBP8.49□□□□□ -1.05
HERC1-213ENST00000561359 CHD2O14647 1828 aaKnown RBP8.49□□□□□ -1.05
HERC1-213ENST00000561359 ADGRB3O60242 1522 aa8.49□□□□□ -1.05
HERC1-213ENST00000561359 DCCP43146 1447 aa8.48□□□□□ -1.05
HERC1-213ENST00000561359 POTEMA6NI47 508 aa8.48□□□□□ -1.05
HERC1-213ENST00000561359 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.48□□□□□ -1.05
HERC1-213ENST00000561359 ZFYVE9O95405 1425 aa8.47□□□□□ -1.05
HERC1-213ENST00000561359 MST1RQ04912 1400 aa8.47□□□□□ -1.05
HERC1-213ENST00000561359 POTEGQ6S5H5 508 aa8.47□□□□□ -1.05
HERC1-213ENST00000561359 RTN4Q9NQC3 1192 aaKnown RBP8.47□□□□□ -1.05
HERC1-213ENST00000561359 RRP7BPQ9NSQ0 103 aa8.47□□□□□ -1.05
HERC1-213ENST00000561359 DUOX2Q9NRD8 1548 aa8.47□□□□□ -1.05
HERC1-213ENST00000561359 NHSL1Q5SYE7 1610 aa8.47□□□□□ -1.05
HERC1-213ENST00000561359 PIK3R4Q99570 1358 aa8.47□□□□□ -1.05
HERC1-213ENST00000561359 KIF15Q9NS87 1388 aa8.47□□□□□ -1.05
HERC1-213ENST00000561359 PTCH1Q13635 1447 aa8.46□□□□□ -1.05
HERC1-213ENST00000561359 SENP3-EIF4A1A0A087X0R7 540 aa8.46□□□□□ -1.06
HERC1-213ENST00000561359 ST18O60284 1047 aa8.46□□□□□ -1.06
HERC1-213ENST00000561359 BAG6P46379 1132 aa8.46□□□□□ -1.06
HERC1-213ENST00000561359 R3HDM1Q15032 1099 aaKnown RBP8.46□□□□□ -1.06
HERC1-213ENST00000561359 RYDENQ9NUL5 291 aaKnown RBP8.46□□□□□ -1.06
HERC1-213ENST00000561359 NOS1P29475 1434 aa8.46□□□□□ -1.06
HERC1-213ENST00000561359 ADAMTS13Q76LX8 1427 aa8.45□□□□□ -1.06
HERC1-213ENST00000561359 BCL9LQ86UU0 1499 aa8.45□□□□□ -1.06
HERC1-213ENST00000561359 PPP1R37O75864 691 aa8.44□□□□□ -1.06
HERC1-213ENST00000561359 NKX1-1Q15270 411 aaPredicted RBP8.44□□□□□ -1.06
HERC1-213ENST00000561359 LCE2DQ5TA82 110 aaPredicted RBP8.44□□□□□ -1.06
HERC1-213ENST00000561359 ERBINQ96RT1 1412 aa8.44□□□□□ -1.06
HERC1-213ENST00000561359 TMEM92Q6UXU6 159 aa8.43□□□□□ -1.06
HERC1-213ENST00000561359 SEPT12Q8IYM1 358 aa8.43□□□□□ -1.06
HERC1-213ENST00000561359 ZNF710Q8N1W2 664 aa8.43□□□□□ -1.06
HERC1-213ENST00000561359 SOS2Q07890 1332 aaPredicted RBP8.43□□□□□ -1.06
HERC1-213ENST00000561359 PTPRUQ92729 1446 aa8.43□□□□□ -1.06
HERC1-213ENST00000561359 UNC5CLQ8IV45 518 aa8.42□□□□□ -1.06
HERC1-213ENST00000561359 RALGAPBQ86X10 1494 aa8.41□□□□□ -1.06
HERC1-213ENST00000561359 A0A0G2JS52 829 aa8.41□□□□□ -1.06
HERC1-213ENST00000561359 MYT1Q01538 1121 aa8.41□□□□□ -1.06
HERC1-213ENST00000561359 EN1Q05925 392 aaPredicted RBP8.41□□□□□ -1.06
HERC1-213ENST00000561359 DOK7Q18PE1 504 aa8.41□□□□□ -1.06
HERC1-213ENST00000561359 KRT27Q7Z3Y8 459 aa8.41□□□□□ -1.06
HERC1-213ENST00000561359 ORAI2Q96SN7 254 aa8.41□□□□□ -1.06
HERC1-213ENST00000561359 TRPM2O94759 1503 aa8.4□□□□□ -1.06
HERC1-213ENST00000561359 LMTK2Q8IWU2 1503 aa8.4□□□□□ -1.06
HERC1-213ENST00000561359 C1orf167Q5SNV9 1468 aa8.4□□□□□ -1.06
HERC1-213ENST00000561359 RIMBP2O15034 1052 aa8.4□□□□□ -1.06
HERC1-213ENST00000561359 TMC2Q8TDI7 906 aa8.4□□□□□ -1.06
HERC1-213ENST00000561359 CCDC9Q9Y3X0 531 aaKnown RBP8.4□□□□□ -1.06
HERC1-213ENST00000561359 UNC13BO14795 1591 aa8.39□□□□□ -1.07
HERC1-213ENST00000561359 MYOM3Q5VTT5 1437 aa8.39□□□□□ -1.07
HERC1-213ENST00000561359 ADGRL3Q9HAR2 1447 aa8.39□□□□□ -1.07
HERC1-213ENST00000561359 PPP1R1BQ9UD71 204 aaPredicted RBP8.39□□□□□ -1.07
HERC1-213ENST00000561359 MYOM2P54296 1465 aa8.38□□□□□ -1.07
HERC1-213ENST00000561359 ZNF784Q8NCA9 323 aaPredicted RBP8.38□□□□□ -1.07
HERC1-213ENST00000561359 MARVELD3Q96A59 401 aa8.38□□□□□ -1.07
HERC1-213ENST00000561359 CEP350Q5VT06 3117 aa8.38□□□□□ -1.07
HERC1-213ENST00000561359 RPRD2Q5VT52 1461 aaKnown RBP8.38□□□□□ -1.07
HERC1-213ENST00000561359 C2orf72A6NCS6 295 aa8.37□□□□□ -1.07
HERC1-213ENST00000561359 HOXB3P14651 431 aaPredicted RBP8.37□□□□□ -1.07
HERC1-213ENST00000561359 EMP3P54852 163 aa8.37□□□□□ -1.07
HERC1-213ENST00000561359 CHIC2Q9UKJ5 165 aa8.37□□□□□ -1.07
HERC1-213ENST00000561359 TMEM131LA2VDJ0 1609 aa8.36□□□□□ -1.07
HERC1-213ENST00000561359 GLI3P10071 1580 aa8.36□□□□□ -1.07
HERC1-213ENST00000561359 NPHP3Q7Z494 1330 aa8.36□□□□□ -1.07
HERC1-213ENST00000561359 C1QTNF8P60827 252 aa8.36□□□□□ -1.07
HERC1-213ENST00000561359 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
HERC1-213ENST00000561359 MYO5BQ9ULV0 1848 aa8.36□□□□□ -1.07
HERC1-213ENST00000561359 METP08581 1390 aa8.35□□□□□ -1.07
HERC1-213ENST00000561359 GCC2Q8IWJ2 1684 aa8.35□□□□□ -1.07
HERC1-213ENST00000561359 GTPBP6O43824 516 aaPredicted RBP8.35□□□□□ -1.07
HERC1-213ENST00000561359 VPS72Q15906 364 aa8.35□□□□□ -1.07
HERC1-213ENST00000561359 ABCC5O15440 1437 aa8.35□□□□□ -1.07
HERC1-213ENST00000561359 ANKRD30AQ9BXX3 1397 aa8.35□□□□□ -1.07
HERC1-213ENST00000561359 SLIT2O94813 1529 aa8.34□□□□□ -1.07
HERC1-213ENST00000561359 ONECUT3O60422 494 aaPredicted RBP8.34□□□□□ -1.07
HERC1-213ENST00000561359 HAP1P54257 671 aaPredicted RBP8.34□□□□□ -1.07
HERC1-213ENST00000561359 EZH2Q15910 746 aaKnown RBP8.34□□□□□ -1.07
HERC1-213ENST00000561359 ESCO1Q5FWF5 840 aa8.34□□□□□ -1.07
HERC1-213ENST00000561359 SPHKAPQ2M3C7 1700 aa8.34□□□□□ -1.07
HERC1-213ENST00000561359 BRWD3Q6RI45 1802 aa8.33□□□□□ -1.08
HERC1-213ENST00000561359 COL22A1Q8NFW1 1626 aaPredicted RBP8.33□□□□□ -1.08
HERC1-213ENST00000561359 FOXO3O43524 673 aa8.33□□□□□ -1.08
HERC1-213ENST00000561359 FAM182BQ5T319 152 aa8.33□□□□□ -1.08
HERC1-213ENST00000561359 XRN1Q8IZH2 1706 aaKnown RBP8.33□□□□□ -1.08
HERC1-213ENST00000561359 SPON1Q9HCB6 807 aa8.33□□□□□ -1.08
HERC1-213ENST00000561359 UTRNP46939 3433 aa8.32□□□□□ -1.08
HERC1-213ENST00000561359 KIF3CO14782 793 aa8.32□□□□□ -1.08
HERC1-213ENST00000561359 FAM98CQ17RN3 349 aaKnown RBP8.32□□□□□ -1.08
HERC1-213ENST00000561359 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
HERC1-213ENST00000561359 BBXQ8WY36 941 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms