RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 FKBPLQ9UIM3 349 aa10.02□□□□□ -0.81
USP8-218ENST00000561330 GTF3C3Q9Y5Q9 886 aa10.02□□□□□ -0.81
USP8-218ENST00000561330 LINC01559Q495D7 138 aa10.01□□□□□ -0.81
USP8-218ENST00000561330 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
USP8-218ENST00000561330 NBPF14Q5TI25 921 aa10.01□□□□□ -0.81
USP8-218ENST00000561330 ZNF598Q86UK7 904 aaKnown RBP10.01□□□□□ -0.81
USP8-218ENST00000561330 PRM3Q9NNZ6 103 aa10.01□□□□□ -0.81
USP8-218ENST00000561330 WNT7BP56706 349 aa10□□□□□ -0.81
USP8-218ENST00000561330 ZNF511Q8NB15 262 aa10□□□□□ -0.81
USP8-218ENST00000561330 SH3BP2P78314 561 aa9.99□□□□□ -0.81
USP8-218ENST00000561330 GPKOWQ92917 476 aaPredicted RBP eCLIP9.99□□□□□ -0.81
USP8-218ENST00000561330 NDUFB9Q9Y6M9 179 aa9.99□□□□□ -0.81
USP8-218ENST00000561330 ZC3H4Q9UPT8 1303 aaKnown RBP9.99□□□□□ -0.81
USP8-218ENST00000561330 SKOR1P84550 965 aa9.98□□□□□ -0.81
USP8-218ENST00000561330 AGERQ15109 404 aa9.96□□□□□ -0.82
USP8-218ENST00000561330 RC3H1Q5TC82 1133 aaKnown RBP9.96□□□□□ -0.82
USP8-218ENST00000561330 PDXDC2PQ6P474 469 aa9.96□□□□□ -0.82
USP8-218ENST00000561330 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
USP8-218ENST00000561330 FOXC1Q12948 553 aa9.95□□□□□ -0.82
USP8-218ENST00000561330 BPHLQ86WA6 291 aaPredicted RBP9.95□□□□□ -0.82
USP8-218ENST00000561330 WNT7AO00755 349 aa9.94□□□□□ -0.82
USP8-218ENST00000561330 FOXJ1Q92949 421 aa9.94□□□□□ -0.82
USP8-218ENST00000561330 GDPD2Q9HCC8 539 aa9.94□□□□□ -0.82
USP8-218ENST00000561330 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
USP8-218ENST00000561330 RAD21O60216 631 aa9.93□□□□□ -0.82
USP8-218ENST00000561330 PTK2Q05397 1052 aa9.93□□□□□ -0.82
USP8-218ENST00000561330 SH3BP5LQ7L8J4 393 aa9.93□□□□□ -0.82
USP8-218ENST00000561330 EHBP1Q8NDI1 1231 aa9.93□□□□□ -0.82
USP8-218ENST00000561330 GPSM3Q9Y4H4 160 aa9.93□□□□□ -0.82
USP8-218ENST00000561330 ARHGAP9Q9BRR9 750 aa9.92□□□□□ -0.82
USP8-218ENST00000561330 PKD2L1Q9P0L9 805 aa9.92□□□□□ -0.82
USP8-218ENST00000561330 VARSP26640 1264 aaKnown RBP9.91□□□□□ -0.82
USP8-218ENST00000561330 COG6Q9Y2V7 657 aa9.91□□□□□ -0.82
USP8-218ENST00000561330 MAGEB6P1A0A0J9YX57 407 aa9.9□□□□□ -0.82
USP8-218ENST00000561330 TNFRSF10AO00220 468 aa9.9□□□□□ -0.82
USP8-218ENST00000561330 GDF9O60383 454 aa9.9□□□□□ -0.82
USP8-218ENST00000561330 GPR37L1O60883 481 aa9.9□□□□□ -0.82
USP8-218ENST00000561330 ABL2P42684 1182 aa9.9□□□□□ -0.82
USP8-218ENST00000561330 FAM174AQ8TBP5 190 aa9.9□□□□□ -0.82
USP8-218ENST00000561330 MRGPRX2Q96LB1 330 aa9.9□□□□□ -0.82
USP8-218ENST00000561330 CARD14Q9BXL6 1004 aa9.9□□□□□ -0.82
USP8-218ENST00000561330 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
USP8-218ENST00000561330 TRIM67Q6ZTA4 783 aa9.89□□□□□ -0.83
USP8-218ENST00000561330 SH3RF1Q7Z6J0 888 aa9.89□□□□□ -0.83
USP8-218ENST00000561330 ZBTB33Q86T24 672 aa9.89□□□□□ -0.83
USP8-218ENST00000561330 POM121Q96HA1 1249 aa9.89□□□□□ -0.83
USP8-218ENST00000561330 PDZRN3Q9UPQ7 1066 aa9.89□□□□□ -0.83
USP8-218ENST00000561330 ZBBXA8MT70 800 aa9.88□□□□□ -0.83
USP8-218ENST00000561330 PRR20EP86478 221 aa9.88□□□□□ -0.83
USP8-218ENST00000561330 PRR20CP86479 221 aa9.88□□□□□ -0.83
USP8-218ENST00000561330 PRR20DP86480 221 aa9.88□□□□□ -0.83
USP8-218ENST00000561330 PRR20BP86481 221 aa9.88□□□□□ -0.83
USP8-218ENST00000561330 PRR20AP86496 221 aa9.88□□□□□ -0.83
USP8-218ENST00000561330 FBXO45P0C2W1 286 aa9.87□□□□□ -0.83
USP8-218ENST00000561330 WWC1Q8IX03 1113 aa9.87□□□□□ -0.83
USP8-218ENST00000561330 CYP4X1Q8N118 509 aa9.87□□□□□ -0.83
USP8-218ENST00000561330 SIAH2O43255 324 aa9.86□□□□□ -0.83
USP8-218ENST00000561330 NR1H3Q13133 447 aa9.86□□□□□ -0.83
USP8-218ENST00000561330 IRF5Q13568 498 aa9.86□□□□□ -0.83
USP8-218ENST00000561330 ADAM32Q8TC27 787 aa9.86□□□□□ -0.83
USP8-218ENST00000561330 OCSTAMPQ9BR26 566 aa9.86□□□□□ -0.83
USP8-218ENST00000561330 C1QTNF2Q9BXJ5 285 aa9.86□□□□□ -0.83
USP8-218ENST00000561330 TTC24A2A3L6 582 aaPredicted RBP9.85□□□□□ -0.83
USP8-218ENST00000561330 GFRA3O60609 400 aa9.85□□□□□ -0.83
USP8-218ENST00000561330 ERFEQ4G0M1 354 aa9.85□□□□□ -0.83
USP8-218ENST00000561330 SNIP1Q8TAD8 396 aaKnown RBP9.85□□□□□ -0.83
USP8-218ENST00000561330 WASHC4Q2M389 1173 aa9.84□□□□□ -0.83
USP8-218ENST00000561330 CLUAP1Q96AJ1 413 aa9.84□□□□□ -0.83
USP8-218ENST00000561330 IRX2Q9BZI1 471 aaPredicted RBP9.84□□□□□ -0.83
USP8-218ENST00000561330 ZNF330Q9Y3S2 320 aaPredicted RBP9.84□□□□□ -0.83
USP8-218ENST00000561330 TRMT44Q8IYL2 757 aaKnown RBP9.83□□□□□ -0.84
USP8-218ENST00000561330 MPNDQ8N594 471 aa9.83□□□□□ -0.84
USP8-218ENST00000561330 SLC10A4Q96EP9 437 aa9.83□□□□□ -0.84
USP8-218ENST00000561330 TOR4AQ9NXH8 423 aa9.83□□□□□ -0.84
USP8-218ENST00000561330 A6NJR5 290 aa9.82□□□□□ -0.84
USP8-218ENST00000561330 ALDH1A1P00352 501 aa9.82□□□□□ -0.84
USP8-218ENST00000561330 ARID5BQ14865 1188 aa9.82□□□□□ -0.84
USP8-218ENST00000561330 LAPTM4AQ15012 233 aa9.82□□□□□ -0.84
USP8-218ENST00000561330 TLL2Q9Y6L7 1015 aa9.82□□□□□ -0.84
USP8-218ENST00000561330 NRG2O14511 850 aaPredicted RBP9.81□□□□□ -0.84
USP8-218ENST00000561330 VAC14Q08AM6 782 aa9.81□□□□□ -0.84
USP8-218ENST00000561330 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
USP8-218ENST00000561330 PCDHB9Q9Y5E1 797 aa9.81□□□□□ -0.84
USP8-218ENST00000561330 VASH1Q7L8A9 365 aaPredicted RBP9.8□□□□□ -0.84
USP8-218ENST00000561330 PROSER2Q86WR7 435 aaPredicted RBP9.8□□□□□ -0.84
USP8-218ENST00000561330 ZNF592Q92610 1267 aa9.8□□□□□ -0.84
USP8-218ENST00000561330 CDK15Q96Q40 435 aa9.8□□□□□ -0.84
USP8-218ENST00000561330 CDV3Q9UKY7 258 aaKnown RBP9.8□□□□□ -0.84
USP8-218ENST00000561330 EIF4G2P78344 907 aaKnown RBP eCLIP9.79□□□□□ -0.84
USP8-218ENST00000561330 MAP4K5Q9Y4K4 846 aa9.79□□□□□ -0.84
USP8-218ENST00000561330 WASF2Q9Y6W5 498 aa9.79□□□□□ -0.84
USP8-218ENST00000561330 J3QL48 77 aa9.78□□□□□ -0.84
USP8-218ENST00000561330 MCCD1P59942 119 aaPredicted RBP9.78□□□□□ -0.84
USP8-218ENST00000561330 C14orf37Q86TY3 774 aa9.78□□□□□ -0.84
USP8-218ENST00000561330 FAM187AA6NFU0 413 aa9.77□□□□□ -0.85
USP8-218ENST00000561330 ADH1CP00326 375 aa9.77□□□□□ -0.85
USP8-218ENST00000561330 SMPD1P17405 629 aa9.77□□□□□ -0.85
USP8-218ENST00000561330 NBPF20Q3BBV1 942 aa9.76□□□□□ -0.85
USP8-218ENST00000561330 FNBP4Q8N3X1 1017 aaPredicted RBP9.76□□□□□ -0.85
USP8-218ENST00000561330 KCTD15Q96SI1 283 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms