RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	MTR	Q99707	1265 aa		11.98	□□□□□ -0.49
MARK3-223	ENST00000561071	C6orf229	H3BNL8	230 aa		11.97	□□□□□ -0.49
MARK3-223	ENST00000561071	RTL5	Q5HYW3	569 aa	Predicted RBP	11.97	□□□□□ -0.49
MARK3-223	ENST00000561071	ZBTB3	Q9H5J0	574 aa		11.97	□□□□□ -0.49
MARK3-223	ENST00000561071	KIF13A	Q9H1H9	1805 aa		11.97	□□□□□ -0.49
MARK3-223	ENST00000561071	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.96	□□□□□ -0.49
MARK3-223	ENST00000561071	NUTM2E	B1AL46	878 aa	Predicted RBP	11.96	□□□□□ -0.49
MARK3-223	ENST00000561071	NR1I2	O75469	434 aa		11.96	□□□□□ -0.49
MARK3-223	ENST00000561071	MTMR2	Q13614	643 aa		11.96	□□□□□ -0.49
MARK3-223	ENST00000561071	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.96	□□□□□ -0.49
MARK3-223	ENST00000561071	PRPF38B	Q5VTL8	546 aa	Known RBP	11.96	□□□□□ -0.49
MARK3-223	ENST00000561071	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.96	□□□□□ -0.49
MARK3-223	ENST00000561071	RFC5	P40937	340 aa		11.95	□□□□□ -0.5
MARK3-223	ENST00000561071	TJAP1	Q5JTD0	557 aa		11.95	□□□□□ -0.5
MARK3-223	ENST00000561071	PPP2R2D	Q66LE6	453 aa		11.95	□□□□□ -0.5
MARK3-223	ENST00000561071	ZNF516	Q92618	1163 aa		11.95	□□□□□ -0.5
MARK3-223	ENST00000561071	ABCC10	Q5T3U5	1492 aa		11.95	□□□□□ -0.5
MARK3-223	ENST00000561071	TNIK	Q9UKE5	1360 aa		11.94	□□□□□ -0.5
MARK3-223	ENST00000561071	THAP11	Q96EK4	314 aa		11.94	□□□□□ -0.5
MARK3-223	ENST00000561071	RAPGEF2	Q9Y4G8	1499 aa		11.94	□□□□□ -0.5
MARK3-223	ENST00000561071	CARMIL2	Q6F5E8	1435 aa		11.94	□□□□□ -0.5
MARK3-223	ENST00000561071	IQGAP2	Q13576	1575 aa		11.93	□□□□□ -0.5
MARK3-223	ENST00000561071	TLL1	O43897	1013 aa		11.93	□□□□□ -0.5
MARK3-223	ENST00000561071		Q3C1V9	767 aa		11.93	□□□□□ -0.5
MARK3-223	ENST00000561071	BRICD5	Q6PL45	260 aa		11.93	□□□□□ -0.5
MARK3-223	ENST00000561071	ZPR1	O75312	459 aa		11.92	□□□□□ -0.5
MARK3-223	ENST00000561071	MAPKBP1	O60336	1514 aa		11.91	□□□□□ -0.5
MARK3-223	ENST00000561071	DISP1	Q96F81	1524 aa		11.91	□□□□□ -0.5
MARK3-223	ENST00000561071	CFAP99	D6REC4	459 aa		11.91	□□□□□ -0.5
MARK3-223	ENST00000561071	FMNL1	O95466	1100 aa	Predicted RBP	11.91	□□□□□ -0.5
MARK3-223	ENST00000561071	IL21	Q9HBE4	155 aa		11.91	□□□□□ -0.5
MARK3-223	ENST00000561071	DIP2B	Q9P265	1576 aa		11.9	□□□□□ -0.5
MARK3-223	ENST00000561071	SALL2	Q9Y467	1007 aa	Predicted RBP	11.9	□□□□□ -0.5
MARK3-223	ENST00000561071	RETREG3	Q86VR2	466 aa		11.89	□□□□□ -0.51
MARK3-223	ENST00000561071	PRR7	Q8TB68	274 aa		11.89	□□□□□ -0.51
MARK3-223	ENST00000561071	SPDYE5	A6NIY4	337 aa		11.88	□□□□□ -0.51
MARK3-223	ENST00000561071	TSC1	Q92574	1164 aa		11.88	□□□□□ -0.51
MARK3-223	ENST00000561071	SPSB2	Q99619	263 aa		11.88	□□□□□ -0.51
MARK3-223	ENST00000561071	USB1	Q9BQ65	265 aa	Known RBP	11.88	□□□□□ -0.51
MARK3-223	ENST00000561071	ABCC2	Q92887	1545 aa		11.87	□□□□□ -0.51
MARK3-223	ENST00000561071	NKX2-3	Q8TAU0	364 aa		11.87	□□□□□ -0.51
MARK3-223	ENST00000561071	UACA	Q9BZF9	1416 aa		11.86	□□□□□ -0.51
MARK3-223	ENST00000561071	UGGT2	Q9NYU1	1516 aa		11.86	□□□□□ -0.51
MARK3-223	ENST00000561071	AP1G2	O75843	785 aa		11.86	□□□□□ -0.51
MARK3-223	ENST00000561071	FAM160A2	Q8N612	972 aa	Predicted RBP	11.86	□□□□□ -0.51
MARK3-223	ENST00000561071	ASXL2	Q76L83	1435 aa		11.86	□□□□□ -0.51
MARK3-223	ENST00000561071	TSPOAP1	O95153	1857 aa		11.85	□□□□□ -0.51
MARK3-223	ENST00000561071	ADH1B	P00325	375 aa		11.84	□□□□□ -0.51
MARK3-223	ENST00000561071	CTDSPL2	Q05D32	466 aa		11.84	□□□□□ -0.51
MARK3-223	ENST00000561071	TMEM259	Q4ZIN3	620 aa		11.84	□□□□□ -0.51
MARK3-223	ENST00000561071	PRDM9	Q9NQV7	894 aa		11.84	□□□□□ -0.51
MARK3-223	ENST00000561071	UHRF1BP1L	A0JNW5	1464 aa		11.83	□□□□□ -0.52
MARK3-223	ENST00000561071	PRX	Q9BXM0	1461 aa		11.83	□□□□□ -0.52
MARK3-223	ENST00000561071	ITGBL1	O95965	494 aa	Predicted RBP	11.83	□□□□□ -0.52
MARK3-223	ENST00000561071	KIAA0556	O60303	1618 aa		11.82	□□□□□ -0.52
MARK3-223	ENST00000561071	KCNC4	Q03721	635 aa		11.82	□□□□□ -0.52
MARK3-223	ENST00000561071	SNRK	Q9NRH2	765 aa		11.82	□□□□□ -0.52
MARK3-223	ENST00000561071	PER1	O15534	1290 aa	Predicted RBP	11.81	□□□□□ -0.52
MARK3-223	ENST00000561071	USP17L8	P0C7I0	530 aa		11.81	□□□□□ -0.52
MARK3-223	ENST00000561071	MSS51	Q4VC12	460 aa		11.81	□□□□□ -0.52
MARK3-223	ENST00000561071	HELB	Q8NG08	1087 aa	Predicted RBP	11.81	□□□□□ -0.52
MARK3-223	ENST00000561071	PLB1	Q6P1J6	1458 aa		11.81	□□□□□ -0.52
MARK3-223	ENST00000561071	KDM5B	Q9UGL1	1544 aa		11.8	□□□□□ -0.52
MARK3-223	ENST00000561071	KDM6B	O15054	1643 aa		11.79	□□□□□ -0.52
MARK3-223	ENST00000561071	MCM6	Q14566	821 aa		11.79	□□□□□ -0.52
MARK3-223	ENST00000561071	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.79	□□□□□ -0.52
MARK3-223	ENST00000561071	BANK1	Q8NDB2	785 aa		11.79	□□□□□ -0.52
MARK3-223	ENST00000561071	LRRN4	Q8WUT4	740 aa		11.79	□□□□□ -0.52
MARK3-223	ENST00000561071	CTTNBP2	Q8WZ74	1663 aa		11.78	□□□□□ -0.52
MARK3-223	ENST00000561071	ARID3C	A6NKF2	412 aa		11.78	□□□□□ -0.52
MARK3-223	ENST00000561071	JUND	P17535	347 aa		11.78	□□□□□ -0.52
MARK3-223	ENST00000561071	DESI1	Q6ICB0	168 aa		11.78	□□□□□ -0.52
MARK3-223	ENST00000561071	SLC6A16	Q9GZN6	736 aa		11.78	□□□□□ -0.52
MARK3-223	ENST00000561071	EPRS	P07814	1512 aa	Known RBP	11.77	□□□□□ -0.52
MARK3-223	ENST00000561071	S1PR4	O95977	384 aa		11.77	□□□□□ -0.53
MARK3-223	ENST00000561071	RANGAP1	P46060	587 aa	Predicted RBP	11.77	□□□□□ -0.53
MARK3-223	ENST00000561071	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.77	□□□□□ -0.53
MARK3-223	ENST00000561071	GOLGA3	Q08378	1498 aa		11.76	□□□□□ -0.53
MARK3-223	ENST00000561071	GLI2	P10070	1586 aa		11.76	□□□□□ -0.53
MARK3-223	ENST00000561071	DXO	O77932	396 aa	Known RBP	11.76	□□□□□ -0.53
MARK3-223	ENST00000561071	FLII	Q13045	1269 aa		11.76	□□□□□ -0.53
MARK3-223	ENST00000561071	MTMR14	Q8NCE2	650 aa		11.76	□□□□□ -0.53
MARK3-223	ENST00000561071	HMX1	Q9NP08	348 aa	Predicted RBP	11.76	□□□□□ -0.53
MARK3-223	ENST00000561071	MMP16	P51512	607 aa		11.75	□□□□□ -0.53
MARK3-223	ENST00000561071	LYPD8	Q6UX82	237 aa		11.75	□□□□□ -0.53
MARK3-223	ENST00000561071	PPRC1	Q5VV67	1664 aa	Known RBP	11.75	□□□□□ -0.53
MARK3-223	ENST00000561071	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.74	□□□□□ -0.53
MARK3-223	ENST00000561071	ABCA8	O94911	1581 aa		11.73	□□□□□ -0.53
MARK3-223	ENST00000561071	TIMELESS	Q9UNS1	1208 aa		11.73	□□□□□ -0.53
MARK3-223	ENST00000561071	WDR7	Q9Y4E6	1490 aa		11.72	□□□□□ -0.53
MARK3-223	ENST00000561071	C14orf37	Q86TY3	774 aa		11.72	□□□□□ -0.53
MARK3-223	ENST00000561071	PPEF1	O14829	653 aa	Predicted RBP	11.71	□□□□□ -0.53
MARK3-223	ENST00000561071	PTPRN	Q16849	979 aa		11.71	□□□□□ -0.53
MARK3-223	ENST00000561071	EPS8L1	Q8TE68	723 aa		11.71	□□□□□ -0.53
MARK3-223	ENST00000561071	MAP3K4	Q9Y6R4	1608 aa		11.71	□□□□□ -0.54
MARK3-223	ENST00000561071	GJD4	Q96KN9	370 aa	Predicted RBP	11.7	□□□□□ -0.54
MARK3-223	ENST00000561071	NUDT12	Q9BQG2	462 aa		11.7	□□□□□ -0.54
MARK3-223	ENST00000561071	TRIM34	Q9BYJ4	488 aa		11.69	□□□□□ -0.54
MARK3-223	ENST00000561071	PLSCR2	Q9NRY7	297 aa		11.69	□□□□□ -0.54
MARK3-223	ENST00000561071	MAP10	Q9P2G4	905 aa		11.69	□□□□□ -0.54

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