RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 MINK1Q8N4C8 1332 aaPredicted RBP15.69■□□□□ 0.1
TPM1-227ENST00000560970 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
TPM1-227ENST00000560970 TRIM26Q12899 539 aaPredicted RBP15.69■□□□□ 0.1
TPM1-227ENST00000560970 TRAK1Q9UPV9 953 aa15.69■□□□□ 0.1
TPM1-227ENST00000560970 RREB1Q92766 1687 aa15.68■□□□□ 0.1
TPM1-227ENST00000560970 SEPT12Q8IYM1 358 aa15.68■□□□□ 0.1
TPM1-227ENST00000560970 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
TPM1-227ENST00000560970 CCDC9Q9Y3X0 531 aaKnown RBP15.68■□□□□ 0.1
TPM1-227ENST00000560970 STAC3Q96MF2 364 aa15.66■□□□□ 0.1
TPM1-227ENST00000560970 PARP4Q9UKK3 1724 aaKnown RBP15.65■□□□□ 0.1
TPM1-227ENST00000560970 WASLO00401 505 aaPredicted RBP15.65■□□□□ 0.1
TPM1-227ENST00000560970 SF3B2Q13435 895 aaKnown RBP15.65■□□□□ 0.1
TPM1-227ENST00000560970 KRT27Q7Z3Y8 459 aa15.65■□□□□ 0.1
TPM1-227ENST00000560970 DCAF11Q8TEB1 546 aa15.65■□□□□ 0.1
TPM1-227ENST00000560970 NUP188Q5SRE5 1749 aa15.65■□□□□ 0.1
TPM1-227ENST00000560970 ONECUT3O60422 494 aaPredicted RBP15.64■□□□□ 0.09
TPM1-227ENST00000560970 A0A0G2JS52 829 aa15.63■□□□□ 0.09
TPM1-227ENST00000560970 FAM83GA6ND36 823 aa15.63■□□□□ 0.09
TPM1-227ENST00000560970 MYT1Q01538 1121 aa15.63■□□□□ 0.09
TPM1-227ENST00000560970 BTG4Q9NY30 223 aa15.63■□□□□ 0.09
TPM1-227ENST00000560970 KDM2AQ9Y2K7 1162 aa15.63■□□□□ 0.09
TPM1-227ENST00000560970 TRPM1Q7Z4N2 1603 aa15.63■□□□□ 0.09
TPM1-227ENST00000560970 AKAP12Q02952 1782 aa15.62■□□□□ 0.09
TPM1-227ENST00000560970 DISP2A7MBM2 1401 aa15.62■□□□□ 0.09
TPM1-227ENST00000560970 DEFB132Q7Z7B7 95 aa15.62■□□□□ 0.09
TPM1-227ENST00000560970 RGPD3A6NKT7 1758 aaPredicted RBP15.62■□□□□ 0.09
TPM1-227ENST00000560970 RGPD4Q7Z3J3 1758 aa15.62■□□□□ 0.09
TPM1-227ENST00000560970 POLR3AO14802 1390 aaPredicted RBP15.62■□□□□ 0.09
TPM1-227ENST00000560970 FAM98CQ17RN3 349 aaKnown RBP15.61■□□□□ 0.09
TPM1-227ENST00000560970 NGDNQ8NEJ9 315 aaKnown RBP15.61■□□□□ 0.09
TPM1-227ENST00000560970 LRRC37A3O60309 1634 aa15.61■□□□□ 0.09
TPM1-227ENST00000560970 PIK3C2AO00443 1686 aa15.6■□□□□ 0.09
TPM1-227ENST00000560970 SPATA31A5Q5VU36 1347 aa15.6■□□□□ 0.09
TPM1-227ENST00000560970 SPATA31A7Q8IWB4 1347 aa15.6■□□□□ 0.09
TPM1-227ENST00000560970 KIAA0232Q92628 1395 aa15.6■□□□□ 0.09
TPM1-227ENST00000560970 PRDM11Q9NQV5 511 aa15.59■□□□□ 0.09
TPM1-227ENST00000560970 SBF2Q86WG5 1849 aa15.59■□□□□ 0.09
TPM1-227ENST00000560970 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.08
TPM1-227ENST00000560970 BAG6P46379 1132 aa15.58■□□□□ 0.08
TPM1-227ENST00000560970 SSH2Q76I76 1423 aa15.57■□□□□ 0.08
TPM1-227ENST00000560970 NUDT16Q96DE0 195 aaKnown RBP15.56■□□□□ 0.08
TPM1-227ENST00000560970 SLIT3O75094 1523 aa15.56■□□□□ 0.08
TPM1-227ENST00000560970 CAMTA1Q9Y6Y1 1673 aa15.56■□□□□ 0.08
TPM1-227ENST00000560970 MON2Q7Z3U7 1717 aa15.56■□□□□ 0.08
TPM1-227ENST00000560970 PEAK1Q9H792 1746 aa15.56■□□□□ 0.08
TPM1-227ENST00000560970 RGPD5Q99666 1765 aa15.55■□□□□ 0.08
TPM1-227ENST00000560970 PPIP5K1Q6PFW1 1433 aa15.55■□□□□ 0.08
TPM1-227ENST00000560970 SPATA31A1Q5TZJ5 1347 aa15.54■□□□□ 0.08
TPM1-227ENST00000560970 COL18A1P39060 1754 aa15.54■□□□□ 0.08
TPM1-227ENST00000560970 COL5A2P05997 1499 aaPredicted RBP15.53■□□□□ 0.08
TPM1-227ENST00000560970 CPDO75976 1380 aa15.53■□□□□ 0.08
TPM1-227ENST00000560970 USP19O94966 1318 aa15.53■□□□□ 0.08
TPM1-227ENST00000560970 USP54Q70EL1 1684 aa15.53■□□□□ 0.08
TPM1-227ENST00000560970 ACEP12821 1306 aa15.52■□□□□ 0.08
TPM1-227ENST00000560970 CDK19Q9BWU1 502 aa15.52■□□□□ 0.08
TPM1-227ENST00000560970 CCDC61Q9Y6R9 512 aa15.51■□□□□ 0.07
TPM1-227ENST00000560970 BRD4O60885 1362 aaPredicted RBP15.5■□□□□ 0.07
TPM1-227ENST00000560970 PARD3Q8TEW0 1356 aa15.5■□□□□ 0.07
TPM1-227ENST00000560970 CHRNA2Q15822 529 aa15.5■□□□□ 0.07
TPM1-227ENST00000560970 USP6P35125 1406 aa15.5■□□□□ 0.07
TPM1-227ENST00000560970 LTN1O94822 1766 aa15.49■□□□□ 0.07
TPM1-227ENST00000560970 CENPJQ9HC77 1338 aaPredicted RBP15.49■□□□□ 0.07
TPM1-227ENST00000560970 PSDA5PKW4 1024 aaPredicted RBP15.49■□□□□ 0.07
TPM1-227ENST00000560970 FAM182BQ5T319 152 aa15.49■□□□□ 0.07
TPM1-227ENST00000560970 STRN4Q9NRL3 753 aa15.49■□□□□ 0.07
TPM1-227ENST00000560970 PLEKHG3A1L390 1219 aa15.48■□□□□ 0.07
TPM1-227ENST00000560970 ZC3H6P61129 1189 aaKnown RBP15.48■□□□□ 0.07
TPM1-227ENST00000560970 EN1Q05925 392 aaPredicted RBP15.48■□□□□ 0.07
TPM1-227ENST00000560970 NUTM2GQ5VZR2 741 aa15.48■□□□□ 0.07
TPM1-227ENST00000560970 SIN3AQ96ST3 1273 aa15.48■□□□□ 0.07
TPM1-227ENST00000560970 PCGF6Q9BYE7 350 aa15.48■□□□□ 0.07
TPM1-227ENST00000560970 ABCC6O95255 1503 aa15.48■□□□□ 0.07
TPM1-227ENST00000560970 NBPF8Q3BBV2 869 aa15.47■□□□□ 0.07
TPM1-227ENST00000560970 CRB1P82279 1406 aa15.46■□□□□ 0.07
TPM1-227ENST00000560970 SRPK2P78362 688 aaKnown RBP15.46■□□□□ 0.07
TPM1-227ENST00000560970 BARGINQ6ZT62 677 aa15.46■□□□□ 0.07
TPM1-227ENST00000560970 ABTB2Q8N961 1025 aa15.46■□□□□ 0.07
TPM1-227ENST00000560970 CASZ1Q86V15 1759 aa15.45■□□□□ 0.06
TPM1-227ENST00000560970 NBPF1Q3BBV0 1214 aa15.45■□□□□ 0.06
TPM1-227ENST00000560970 FAM196AQ6ZSG2 479 aa15.45■□□□□ 0.06
TPM1-227ENST00000560970 OVOS2A0A0G2JMS6 1433 aa15.44■□□□□ 0.06
TPM1-227ENST00000560970 OVOS2A0A0J9YW53 1432 aa15.44■□□□□ 0.06
TPM1-227ENST00000560970 OVOS2Q6IE36 1432 aa15.44■□□□□ 0.06
TPM1-227ENST00000560970 USP35Q9P2H5 1018 aa15.44■□□□□ 0.06
TPM1-227ENST00000560970 CPSF1Q10570 1443 aaKnown RBP15.43■□□□□ 0.06
TPM1-227ENST00000560970 NFAT5O94916 1531 aa15.43■□□□□ 0.06
TPM1-227ENST00000560970 TRIM37O94972 964 aa15.43■□□□□ 0.06
TPM1-227ENST00000560970 NHSQ6T4R5 1651 aa15.42■□□□□ 0.06
TPM1-227ENST00000560970 FAM208AQ9UK61 1670 aaKnown RBP15.42■□□□□ 0.06
TPM1-227ENST00000560970 EVA1CP58658 441 aa15.42■□□□□ 0.06
TPM1-227ENST00000560970 R3HDM1Q15032 1099 aaKnown RBP15.42■□□□□ 0.06
TPM1-227ENST00000560970 EZH2Q15910 746 aaKnown RBP15.42■□□□□ 0.06
TPM1-227ENST00000560970 LARP1Q6PKG0 1096 aaKnown RBP15.42■□□□□ 0.06
TPM1-227ENST00000560970 NLRP13Q86W25 1043 aa15.42■□□□□ 0.06
TPM1-227ENST00000560970 TCP11L2Q8N4U5 519 aa15.42■□□□□ 0.06
TPM1-227ENST00000560970 NEUROD1Q13562 356 aa15.41■□□□□ 0.06
TPM1-227ENST00000560970 CABP2Q9NPB3 220 aa15.41■□□□□ 0.06
TPM1-227ENST00000560970 THRAP3Q9Y2W1 955 aaKnown RBP15.41■□□□□ 0.06
TPM1-227ENST00000560970 AATKQ6ZMQ8 1374 aa15.4■□□□□ 0.06
TPM1-227ENST00000560970 PDE3BQ13370 1112 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms