RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 ATAD2Q6PL18 1390 aa17.03■□□□□ 0.32
USP8-212ENST00000560730 NUTM2GQ5VZR2 741 aa17.03■□□□□ 0.32
USP8-212ENST00000560730 AKAP12Q02952 1782 aa17.03■□□□□ 0.32
USP8-212ENST00000560730 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.31
USP8-212ENST00000560730 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
USP8-212ENST00000560730 ZNF772Q68DY9 489 aaPredicted RBP17.01■□□□□ 0.31
USP8-212ENST00000560730 USP6P35125 1406 aa17■□□□□ 0.31
USP8-212ENST00000560730 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
USP8-212ENST00000560730 FNBP4Q8N3X1 1017 aaPredicted RBP16.99■□□□□ 0.31
USP8-212ENST00000560730 CPSF1Q10570 1443 aaKnown RBP16.99■□□□□ 0.31
USP8-212ENST00000560730 SSH2Q76I76 1423 aa16.99■□□□□ 0.31
USP8-212ENST00000560730 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
USP8-212ENST00000560730 TMC1Q8TDI8 760 aa16.98■□□□□ 0.31
USP8-212ENST00000560730 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
USP8-212ENST00000560730 CD163L1Q9NR16 1453 aa16.98■□□□□ 0.31
USP8-212ENST00000560730 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
USP8-212ENST00000560730 QTRT2Q9H974 415 aaKnown RBP16.97■□□□□ 0.31
USP8-212ENST00000560730 USP21Q9UK80 565 aa16.97■□□□□ 0.31
USP8-212ENST00000560730 FAM83GA6ND36 823 aa16.96■□□□□ 0.31
USP8-212ENST00000560730 TMF1P82094 1093 aa16.96■□□□□ 0.31
USP8-212ENST00000560730 BCL9LQ86UU0 1499 aa16.96■□□□□ 0.31
USP8-212ENST00000560730 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.31
USP8-212ENST00000560730 BRD4O60885 1362 aaPredicted RBP16.96■□□□□ 0.31
USP8-212ENST00000560730 MON2Q7Z3U7 1717 aa16.96■□□□□ 0.3
USP8-212ENST00000560730 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
USP8-212ENST00000560730 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
USP8-212ENST00000560730 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
USP8-212ENST00000560730 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
USP8-212ENST00000560730 PIK3C2AO00443 1686 aa16.95■□□□□ 0.3
USP8-212ENST00000560730 SLIT2O94813 1529 aa16.94■□□□□ 0.3
USP8-212ENST00000560730 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
USP8-212ENST00000560730 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
USP8-212ENST00000560730 USP19O94966 1318 aa16.94■□□□□ 0.3
USP8-212ENST00000560730 RXRBP28702 533 aa16.93■□□□□ 0.3
USP8-212ENST00000560730 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP8-212ENST00000560730 NLRP6P59044 892 aa16.92■□□□□ 0.3
USP8-212ENST00000560730 ZC3H6P61129 1189 aaKnown RBP16.92■□□□□ 0.3
USP8-212ENST00000560730 NLRP13Q86W25 1043 aa16.92■□□□□ 0.3
USP8-212ENST00000560730 A0A1W2PP64 1363 aa16.92■□□□□ 0.3
USP8-212ENST00000560730 ATRNO75882 1429 aa16.92■□□□□ 0.3
USP8-212ENST00000560730 SOCS7O14512 581 aa16.91■□□□□ 0.3
USP8-212ENST00000560730 HDGFL2Q7Z4V5 671 aaPredicted RBP16.91■□□□□ 0.3
USP8-212ENST00000560730 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
USP8-212ENST00000560730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.91■□□□□ 0.3
USP8-212ENST00000560730 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
USP8-212ENST00000560730 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.91■□□□□ 0.3
USP8-212ENST00000560730 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
USP8-212ENST00000560730 COL14A1Q05707 1796 aaKnown RBP16.9■□□□□ 0.3
USP8-212ENST00000560730 GCP02774 474 aa16.9■□□□□ 0.3
USP8-212ENST00000560730 CHRNA2Q15822 529 aa16.9■□□□□ 0.3
USP8-212ENST00000560730 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
USP8-212ENST00000560730 TRPC5Q9UL62 973 aaPredicted RBP16.9■□□□□ 0.3
USP8-212ENST00000560730 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
USP8-212ENST00000560730 KIAA0232Q92628 1395 aa16.9■□□□□ 0.3
USP8-212ENST00000560730 RBM6P78332 1123 aaKnown RBP16.89■□□□□ 0.29
USP8-212ENST00000560730 PRDM11Q9NQV5 511 aa16.89■□□□□ 0.29
USP8-212ENST00000560730 BTG4Q9NY30 223 aa16.88■□□□□ 0.29
USP8-212ENST00000560730 NINLQ9Y2I6 1382 aa16.88■□□□□ 0.29
USP8-212ENST00000560730 NRAPQ86VF7 1730 aa16.88■□□□□ 0.29
USP8-212ENST00000560730 MYOM1P52179 1685 aa16.88■□□□□ 0.29
USP8-212ENST00000560730 SLIT3O75094 1523 aa16.88■□□□□ 0.29
USP8-212ENST00000560730 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
USP8-212ENST00000560730 CDCA8Q53HL2 280 aa16.87■□□□□ 0.29
USP8-212ENST00000560730 NME9Q86XW9 330 aa16.87■□□□□ 0.29
USP8-212ENST00000560730 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
USP8-212ENST00000560730 ANKRD36BQ8N2N9 1353 aa16.85■□□□□ 0.29
USP8-212ENST00000560730 C11orf95C9JLR9 678 aaPredicted RBP16.85■□□□□ 0.29
USP8-212ENST00000560730 GLI3P10071 1580 aa16.85■□□□□ 0.29
USP8-212ENST00000560730 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
USP8-212ENST00000560730 RGS12O14924 1447 aa16.84■□□□□ 0.29
USP8-212ENST00000560730 CPDO75976 1380 aa16.84■□□□□ 0.29
USP8-212ENST00000560730 SOX12O15370 315 aa16.84■□□□□ 0.29
USP8-212ENST00000560730 VPS72Q15906 364 aa16.84■□□□□ 0.29
USP8-212ENST00000560730 POLR3GLQ9BT43 218 aa16.84■□□□□ 0.29
USP8-212ENST00000560730 USP31Q70CQ4 1352 aa16.83■□□□□ 0.29
USP8-212ENST00000560730 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
USP8-212ENST00000560730 USP54Q70EL1 1684 aa16.83■□□□□ 0.28
USP8-212ENST00000560730 LMO7Q8WWI1 1683 aa16.82■□□□□ 0.28
USP8-212ENST00000560730 CAMTA1Q9Y6Y1 1673 aa16.82■□□□□ 0.28
USP8-212ENST00000560730 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
USP8-212ENST00000560730 COL18A1P39060 1754 aa16.81■□□□□ 0.28
USP8-212ENST00000560730 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
USP8-212ENST00000560730 NFAT5O94916 1531 aa16.81■□□□□ 0.28
USP8-212ENST00000560730 RGPD5Q99666 1765 aa16.81■□□□□ 0.28
USP8-212ENST00000560730 STRN4Q9NRL3 753 aa16.8■□□□□ 0.28
USP8-212ENST00000560730 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
USP8-212ENST00000560730 KCNH5Q8NCM2 988 aa16.79■□□□□ 0.28
USP8-212ENST00000560730 OVOS2A0A0J9YW53 1432 aa16.79■□□□□ 0.28
USP8-212ENST00000560730 OVOS2Q6IE36 1432 aa16.79■□□□□ 0.28
USP8-212ENST00000560730 AXIN2Q9Y2T1 843 aa16.79■□□□□ 0.28
USP8-212ENST00000560730 SPATA31A5Q5VU36 1347 aa16.78■□□□□ 0.28
USP8-212ENST00000560730 SPATA31A7Q8IWB4 1347 aa16.78■□□□□ 0.28
USP8-212ENST00000560730 BRWD3Q6RI45 1802 aa16.78■□□□□ 0.28
USP8-212ENST00000560730 FYB1O15117 783 aa16.78■□□□□ 0.28
USP8-212ENST00000560730 AATKQ6ZMQ8 1374 aa16.78■□□□□ 0.28
USP8-212ENST00000560730 EVA1CP58658 441 aa16.77■□□□□ 0.27
USP8-212ENST00000560730 LTN1O94822 1766 aa16.76■□□□□ 0.27
USP8-212ENST00000560730 KIF20BQ96Q89 1820 aa16.76■□□□□ 0.27
USP8-212ENST00000560730 FBLN1P23142 703 aa16.76■□□□□ 0.27
USP8-212ENST00000560730 LARP1Q6PKG0 1096 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms