RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 EMILIN1Q9Y6C2 1016 aa14.43□□□□□ -0.1
SNRPA1-211ENST00000560433 SMG6Q86US8 1419 aaKnown RBP14.42□□□□□ -0.1
SNRPA1-211ENST00000560433 NGDNQ8NEJ9 315 aaKnown RBP14.42□□□□□ -0.1
SNRPA1-211ENST00000560433 ADGRB2O60241 1585 aa14.42□□□□□ -0.1
SNRPA1-211ENST00000560433 EDC4Q6P2E9 1401 aaKnown RBP14.42□□□□□ -0.1
SNRPA1-211ENST00000560433 CHD2O14647 1828 aaKnown RBP14.42□□□□□ -0.1
SNRPA1-211ENST00000560433 SHPRHQ149N8 1683 aa14.42□□□□□ -0.1
SNRPA1-211ENST00000560433 POLKQ9UBT6 870 aa14.41□□□□□ -0.1
SNRPA1-211ENST00000560433 COG3Q96JB2 828 aa14.41□□□□□ -0.1
SNRPA1-211ENST00000560433 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
SNRPA1-211ENST00000560433 PIK3R4Q99570 1358 aa14.4□□□□□ -0.1
SNRPA1-211ENST00000560433 PLEKHG3A1L390 1219 aa14.4□□□□□ -0.1
SNRPA1-211ENST00000560433 NUTM2GQ5VZR2 741 aa14.4□□□□□ -0.1
SNRPA1-211ENST00000560433 TTC21BQ7Z4L5 1316 aa14.4□□□□□ -0.1
SNRPA1-211ENST00000560433 ITSN1Q15811 1721 aa14.4□□□□□ -0.1
SNRPA1-211ENST00000560433 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
SNRPA1-211ENST00000560433 ANKRD26Q9UPS8 1709 aa14.39□□□□□ -0.11
SNRPA1-211ENST00000560433 DMRT2Q9Y5R5 561 aa14.39□□□□□ -0.11
SNRPA1-211ENST00000560433 AKAP12Q02952 1782 aa14.39□□□□□ -0.11
SNRPA1-211ENST00000560433 MON2Q7Z3U7 1717 aa14.38□□□□□ -0.11
SNRPA1-211ENST00000560433 MAP2P11137 1827 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-211ENST00000560433 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
SNRPA1-211ENST00000560433 TOPAZ1Q8N9V7 1692 aa14.38□□□□□ -0.11
SNRPA1-211ENST00000560433 USP6P35125 1406 aa14.37□□□□□ -0.11
SNRPA1-211ENST00000560433 NALCNQ8IZF0 1738 aa14.37□□□□□ -0.11
SNRPA1-211ENST00000560433 PAK3O75914 559 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-211ENST00000560433 PROSER2Q86WR7 435 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-211ENST00000560433 TCP11L2Q8N4U5 519 aa14.37□□□□□ -0.11
SNRPA1-211ENST00000560433 INSRP06213 1382 aa14.36□□□□□ -0.11
SNRPA1-211ENST00000560433 DIAPH1O60610 1272 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-211ENST00000560433 ESCO1Q5FWF5 840 aa14.36□□□□□ -0.11
SNRPA1-211ENST00000560433 RUNDC1Q96C34 613 aa14.35□□□□□ -0.11
SNRPA1-211ENST00000560433 HMOX1P09601 288 aa14.35□□□□□ -0.11
SNRPA1-211ENST00000560433 XPCQ01831 940 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-211ENST00000560433 ZNF521Q96K83 1311 aa14.34□□□□□ -0.11
SNRPA1-211ENST00000560433 GOLGA2Q08379 1002 aa14.34□□□□□ -0.11
SNRPA1-211ENST00000560433 PDE3BQ13370 1112 aa14.34□□□□□ -0.11
SNRPA1-211ENST00000560433 ORAI2Q96SN7 254 aa14.34□□□□□ -0.11
SNRPA1-211ENST00000560433 COL3A1P02461 1466 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-211ENST00000560433 RCAN3Q9UKA8 241 aa14.33□□□□□ -0.12
SNRPA1-211ENST00000560433 DUSP27Q5VZP5 1158 aa14.32□□□□□ -0.12
SNRPA1-211ENST00000560433 WWC1Q8IX03 1113 aa14.32□□□□□ -0.12
SNRPA1-211ENST00000560433 PHF8Q9UPP1 1060 aa14.32□□□□□ -0.12
SNRPA1-211ENST00000560433 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
SNRPA1-211ENST00000560433 NRKQ7Z2Y5 1582 aa14.32□□□□□ -0.12
SNRPA1-211ENST00000560433 PLIN1O60240 522 aa14.32□□□□□ -0.12
SNRPA1-211ENST00000560433 NLRP6P59044 892 aa14.32□□□□□ -0.12
SNRPA1-211ENST00000560433 PNPLA6Q8IY17 1366 aa14.31□□□□□ -0.12
SNRPA1-211ENST00000560433 FOXO3O43524 673 aa14.31□□□□□ -0.12
SNRPA1-211ENST00000560433 ABTB2Q8N961 1025 aa14.31□□□□□ -0.12
SNRPA1-211ENST00000560433 PLEKHF1Q96S99 279 aa14.31□□□□□ -0.12
SNRPA1-211ENST00000560433 SSH2Q76I76 1423 aa14.31□□□□□ -0.12
SNRPA1-211ENST00000560433 ADGRL3Q9HAR2 1447 aa14.31□□□□□ -0.12
SNRPA1-211ENST00000560433 SLFN5Q08AF3 891 aa14.3□□□□□ -0.12
SNRPA1-211ENST00000560433 HSP90AB2PQ58FF8 381 aa14.3□□□□□ -0.12
SNRPA1-211ENST00000560433 OVOS2A0A0J9YW53 1432 aa14.29□□□□□ -0.12
SNRPA1-211ENST00000560433 OVOS2Q6IE36 1432 aa14.29□□□□□ -0.12
SNRPA1-211ENST00000560433 PRKAR2BP31323 418 aa14.29□□□□□ -0.12
SNRPA1-211ENST00000560433 PSME1Q06323 249 aa14.29□□□□□ -0.12
SNRPA1-211ENST00000560433 ANKARQ7Z5J8 1434 aa14.28□□□□□ -0.12
SNRPA1-211ENST00000560433 IL13P35225 146 aa14.28□□□□□ -0.12
SNRPA1-211ENST00000560433 DDX17Q92841 729 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-211ENST00000560433 STRCP1A6NGW2 1772 aa14.28□□□□□ -0.12
SNRPA1-211ENST00000560433 LMTK3Q96Q04 1460 aa14.28□□□□□ -0.12
SNRPA1-211ENST00000560433 AATKQ6ZMQ8 1374 aa14.28□□□□□ -0.12
SNRPA1-211ENST00000560433 LMOD2Q6P5Q4 547 aa14.27□□□□□ -0.12
SNRPA1-211ENST00000560433 PHACTR3Q96KR7 559 aa14.27□□□□□ -0.12
SNRPA1-211ENST00000560433 MAPK8IP3Q9UPT6 1336 aa14.27□□□□□ -0.12
SNRPA1-211ENST00000560433 TMEM94Q12767 1356 aa14.27□□□□□ -0.13
SNRPA1-211ENST00000560433 IQSEC2Q5JU85 1478 aa14.27□□□□□ -0.13
SNRPA1-211ENST00000560433 B4GALNT3Q6L9W6 998 aa14.26□□□□□ -0.13
SNRPA1-211ENST00000560433 MAP3K19Q56UN5 1328 aa14.26□□□□□ -0.13
SNRPA1-211ENST00000560433 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
SNRPA1-211ENST00000560433 ZBTB7CA1YPR0 619 aa14.26□□□□□ -0.13
SNRPA1-211ENST00000560433 TMPOP42166 694 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-211ENST00000560433 RRP1P56182 461 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-211ENST00000560433 PIK3C2AO00443 1686 aa14.26□□□□□ -0.13
SNRPA1-211ENST00000560433 EIF4A2Q14240 407 aaKnown RBP14.25□□□□□ -0.13
SNRPA1-211ENST00000560433 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
SNRPA1-211ENST00000560433 RSPH6AQ9H0K4 717 aa14.25□□□□□ -0.13
SNRPA1-211ENST00000560433 RNF123Q5XPI4 1314 aa14.25□□□□□ -0.13
SNRPA1-211ENST00000560433 RIPK4P57078 832 aa14.25□□□□□ -0.13
SNRPA1-211ENST00000560433 C19orf44Q9H6X5 657 aa14.25□□□□□ -0.13
SNRPA1-211ENST00000560433 NWD1Q149M9 1564 aa14.24□□□□□ -0.13
SNRPA1-211ENST00000560433 E9PSI1 815 aa14.24□□□□□ -0.13
SNRPA1-211ENST00000560433 TRMT2AQ8IZ69 625 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-211ENST00000560433 TRIM35Q9UPQ4 493 aa14.24□□□□□ -0.13
SNRPA1-211ENST00000560433 CDK12Q9NYV4 1490 aaPredicted RBP14.23□□□□□ -0.13
SNRPA1-211ENST00000560433 LRRC7Q96NW7 1537 aa14.23□□□□□ -0.13
SNRPA1-211ENST00000560433 FCHSD2O94868 740 aa14.23□□□□□ -0.13
SNRPA1-211ENST00000560433 AMPHP49418 695 aa14.23□□□□□ -0.13
SNRPA1-211ENST00000560433 ZNF335Q9H4Z2 1342 aaPredicted RBP14.23□□□□□ -0.13
SNRPA1-211ENST00000560433 PEAK1Q9H792 1746 aa14.23□□□□□ -0.13
SNRPA1-211ENST00000560433 SULT6B1Q6IMI4 303 aa14.23□□□□□ -0.13
SNRPA1-211ENST00000560433 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
SNRPA1-211ENST00000560433 USP31Q70CQ4 1352 aa14.23□□□□□ -0.13
SNRPA1-211ENST00000560433 ATF3P18847 181 aa14.22□□□□□ -0.13
SNRPA1-211ENST00000560433 C20orf194Q5TEA3 1177 aa14.22□□□□□ -0.13
SNRPA1-211ENST00000560433 TSR2Q969E8 191 aaKnown RBP14.22□□□□□ -0.13
SNRPA1-211ENST00000560433 THUMPD2Q9BTF0 503 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms