RNA–Protein interactions for RNA: ENST00000560234.1

PCLAF-208, Transcript of PCNA clamp associated factor, human

TSL 2

Gene PCLAF, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCLAF-208	ENST00000560234	KIAA1210	Q9ULL0	1709 aa		13.9	□□□□□ -0.18
PCLAF-208	ENST00000560234	PSME1	Q06323	249 aa		13.89	□□□□□ -0.19
PCLAF-208	ENST00000560234	LHX8	Q68G74	356 aa		13.89	□□□□□ -0.19
PCLAF-208	ENST00000560234	NUDT16	Q96DE0	195 aa	Known RBP	13.89	□□□□□ -0.19
PCLAF-208	ENST00000560234	CABP2	Q9NPB3	220 aa		13.89	□□□□□ -0.19
PCLAF-208	ENST00000560234	PRR36	Q9H6K5	1346 aa		13.89	□□□□□ -0.19
PCLAF-208	ENST00000560234	RALGAPB	Q86X10	1494 aa		13.88	□□□□□ -0.19
PCLAF-208	ENST00000560234	GPRASP1	Q5JY77	1395 aa		13.88	□□□□□ -0.19
PCLAF-208	ENST00000560234	PLEKHG5	O94827	1062 aa		13.88	□□□□□ -0.19
PCLAF-208	ENST00000560234	KRT28	Q7Z3Y7	464 aa		13.88	□□□□□ -0.19
PCLAF-208	ENST00000560234	NGDN	Q8NEJ9	315 aa	Known RBP	13.88	□□□□□ -0.19
PCLAF-208	ENST00000560234	TRPM1	Q7Z4N2	1603 aa		13.88	□□□□□ -0.19
PCLAF-208	ENST00000560234	PHLPP1	O60346	1717 aa		13.87	□□□□□ -0.19
PCLAF-208	ENST00000560234	MEX3C	Q5U5Q3	659 aa	Known RBP	13.87	□□□□□ -0.19
PCLAF-208	ENST00000560234	LMOD2	Q6P5Q4	547 aa		13.87	□□□□□ -0.19
PCLAF-208	ENST00000560234	ANKAR	Q7Z5J8	1434 aa		13.87	□□□□□ -0.19
PCLAF-208	ENST00000560234	SOS2	Q07890	1332 aa	Predicted RBP	13.87	□□□□□ -0.19
PCLAF-208	ENST00000560234	EVC2	Q86UK5	1308 aa		13.87	□□□□□ -0.19
PCLAF-208	ENST00000560234	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.86	□□□□□ -0.19
PCLAF-208	ENST00000560234	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.85	□□□□□ -0.19
PCLAF-208	ENST00000560234	ST20-MTHFS	A0A0A6YYL1	179 aa		13.84	□□□□□ -0.19
PCLAF-208	ENST00000560234	PAK3	O75914	559 aa	Predicted RBP	13.84	□□□□□ -0.19
PCLAF-208	ENST00000560234	CCDC61	Q9Y6R9	512 aa		13.84	□□□□□ -0.19
PCLAF-208	ENST00000560234	SPATA31A6	Q5VVP1	1343 aa		13.84	□□□□□ -0.19
PCLAF-208	ENST00000560234	TULP4	Q9NRJ4	1543 aa		13.84	□□□□□ -0.19
PCLAF-208	ENST00000560234	FMN2	Q9NZ56	1722 aa		13.84	□□□□□ -0.19
PCLAF-208	ENST00000560234	ADGRB2	O60241	1585 aa		13.83	□□□□□ -0.19
PCLAF-208	ENST00000560234	COL16A1	Q07092	1604 aa	Predicted RBP	13.83	□□□□□ -0.2
PCLAF-208	ENST00000560234	DCBLD2	Q96PD2	775 aa		13.83	□□□□□ -0.2
PCLAF-208	ENST00000560234	PNPLA6	Q8IY17	1366 aa		13.83	□□□□□ -0.2
PCLAF-208	ENST00000560234	ADAMTS2	O95450	1211 aa		13.82	□□□□□ -0.2
PCLAF-208	ENST00000560234	CABP1	Q9NZU7	370 aa		13.82	□□□□□ -0.2
PCLAF-208	ENST00000560234	GALR2	O43603	387 aa	Predicted RBP	13.81	□□□□□ -0.2
PCLAF-208	ENST00000560234	HAP1	P54257	671 aa	Predicted RBP	13.81	□□□□□ -0.2
PCLAF-208	ENST00000560234	USP47	Q96K76	1375 aa		13.81	□□□□□ -0.2
PCLAF-208	ENST00000560234	MED1	Q15648	1581 aa	Predicted RBP	13.8	□□□□□ -0.2
PCLAF-208	ENST00000560234	ACE	P12821	1306 aa		13.8	□□□□□ -0.2
PCLAF-208	ENST00000560234	SPATA31A3	Q5VYP0	1347 aa		13.8	□□□□□ -0.2
PCLAF-208	ENST00000560234	ATP7B	P35670	1465 aa		13.8	□□□□□ -0.2
PCLAF-208	ENST00000560234	PXDN	Q92626	1479 aa		13.8	□□□□□ -0.2
PCLAF-208	ENST00000560234	PLEKHG3	A1L390	1219 aa		13.79	□□□□□ -0.2
PCLAF-208	ENST00000560234	TMC1	Q8TDI8	760 aa		13.79	□□□□□ -0.2
PCLAF-208	ENST00000560234	PPIP5K1	Q6PFW1	1433 aa		13.79	□□□□□ -0.2
PCLAF-208	ENST00000560234	NHSL1	Q5SYE7	1610 aa		13.79	□□□□□ -0.2
PCLAF-208	ENST00000560234	CABLES1	Q8TDN4	633 aa		13.78	□□□□□ -0.2
PCLAF-208	ENST00000560234	PHF12	Q96QT6	1004 aa		13.78	□□□□□ -0.2
PCLAF-208	ENST00000560234	QRICH2	Q9H0J4	1663 aa		13.78	□□□□□ -0.2
PCLAF-208	ENST00000560234	USP32	Q8NFA0	1604 aa		13.77	□□□□□ -0.21
PCLAF-208	ENST00000560234	C8orf37	Q96NL8	207 aa		13.77	□□□□□ -0.21
PCLAF-208	ENST00000560234	KIF1A	Q12756	1690 aa		13.76	□□□□□ -0.21
PCLAF-208	ENST00000560234	TNS3	Q68CZ2	1445 aa		13.76	□□□□□ -0.21
PCLAF-208	ENST00000560234	SBNO1	A3KN83	1393 aa		13.76	□□□□□ -0.21
PCLAF-208	ENST00000560234	TMF1	P82094	1093 aa		13.76	□□□□□ -0.21
PCLAF-208	ENST00000560234	NUTM2G	Q5VZR2	741 aa		13.76	□□□□□ -0.21
PCLAF-208	ENST00000560234	NGLY1	Q96IV0	654 aa		13.76	□□□□□ -0.21
PCLAF-208	ENST00000560234	TESK2	Q96S53	571 aa		13.76	□□□□□ -0.21
PCLAF-208	ENST00000560234	LRP6	O75581	1613 aa		13.75	□□□□□ -0.21
PCLAF-208	ENST00000560234	ATAD2	Q6PL18	1390 aa		13.75	□□□□□ -0.21
PCLAF-208	ENST00000560234	SBNO2	Q9Y2G9	1366 aa		13.75	□□□□□ -0.21
PCLAF-208	ENST00000560234	SLC24A1	O60721	1099 aa		13.75	□□□□□ -0.21
PCLAF-208	ENST00000560234	ARHGEF10	O15013	1369 aa		13.74	□□□□□ -0.21
PCLAF-208	ENST00000560234	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
PCLAF-208	ENST00000560234	POLR3GL	Q9BT43	218 aa		13.74	□□□□□ -0.21
PCLAF-208	ENST00000560234	POLR3A	O14802	1390 aa	Predicted RBP	13.73	□□□□□ -0.21
PCLAF-208	ENST00000560234	HSPA5	P11021	654 aa	Known RBP	13.73	□□□□□ -0.21
PCLAF-208	ENST00000560234	ABTB2	Q8N961	1025 aa		13.73	□□□□□ -0.21
PCLAF-208	ENST00000560234	SLC12A5	Q9H2X9	1139 aa		13.73	□□□□□ -0.21
PCLAF-208	ENST00000560234	RGS17	Q9UGC6	210 aa	Predicted RBP	13.73	□□□□□ -0.21
PCLAF-208	ENST00000560234	AFF2	P51816	1311 aa		13.72	□□□□□ -0.21
PCLAF-208	ENST00000560234	RGPD8	O14715	1765 aa	Predicted RBP	13.72	□□□□□ -0.21
PCLAF-208	ENST00000560234	CDCA8	Q53HL2	280 aa		13.71	□□□□□ -0.21
PCLAF-208	ENST00000560234	ZNF772	Q68DY9	489 aa	Predicted RBP	13.71	□□□□□ -0.21
PCLAF-208	ENST00000560234	ILDR2	Q71H61	639 aa		13.71	□□□□□ -0.21
PCLAF-208	ENST00000560234	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.71	□□□□□ -0.21
PCLAF-208	ENST00000560234	SHPRH	Q149N8	1683 aa		13.71	□□□□□ -0.21
PCLAF-208	ENST00000560234	POTEA	Q6S8J7	498 aa		13.7	□□□□□ -0.22
PCLAF-208	ENST00000560234	TERF2IP	Q9NYB0	399 aa		13.7	□□□□□ -0.22
PCLAF-208	ENST00000560234	KTN1	Q86UP2	1357 aa	Known RBP	13.7	□□□□□ -0.22
PCLAF-208	ENST00000560234	NLRP6	P59044	892 aa		13.69	□□□□□ -0.22
PCLAF-208	ENST00000560234	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PCLAF-208	ENST00000560234	PUS7	Q96PZ0	661 aa	Known RBP	13.69	□□□□□ -0.22
PCLAF-208	ENST00000560234	USP6	P35125	1406 aa		13.68	□□□□□ -0.22
PCLAF-208	ENST00000560234	ZBTB7C	A1YPR0	619 aa		13.68	□□□□□ -0.22
PCLAF-208	ENST00000560234	NLRP13	Q86W25	1043 aa		13.68	□□□□□ -0.22
PCLAF-208	ENST00000560234	USP21	Q9UK80	565 aa		13.68	□□□□□ -0.22
PCLAF-208	ENST00000560234	ZC3H6	P61129	1189 aa	Known RBP	13.67	□□□□□ -0.22
PCLAF-208	ENST00000560234	ITSN1	Q15811	1721 aa		13.67	□□□□□ -0.22
PCLAF-208	ENST00000560234	TTC21B	Q7Z4L5	1316 aa		13.66	□□□□□ -0.22
PCLAF-208	ENST00000560234	SOX12	O15370	315 aa		13.66	□□□□□ -0.22
PCLAF-208	ENST00000560234	QTRT2	Q9H974	415 aa	Known RBP	13.66	□□□□□ -0.22
PCLAF-208	ENST00000560234	TOPAZ1	Q8N9V7	1692 aa		13.66	□□□□□ -0.22
PCLAF-208	ENST00000560234	FAM83G	A6ND36	823 aa		13.65	□□□□□ -0.22
PCLAF-208	ENST00000560234	MIER1	Q8N108	512 aa		13.65	□□□□□ -0.22
PCLAF-208	ENST00000560234	PRDM11	Q9NQV5	511 aa		13.65	□□□□□ -0.22
PCLAF-208	ENST00000560234	BRD4	O60885	1362 aa	Predicted RBP	13.65	□□□□□ -0.22
PCLAF-208	ENST00000560234	RXRB	P28702	533 aa		13.64	□□□□□ -0.23
PCLAF-208	ENST00000560234	CHRNA2	Q15822	529 aa		13.64	□□□□□ -0.23
PCLAF-208	ENST00000560234	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.64	□□□□□ -0.23
PCLAF-208	ENST00000560234	CCDC9	Q9Y3X0	531 aa	Known RBP	13.64	□□□□□ -0.23
PCLAF-208	ENST00000560234	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms