RNA–Protein interactions for RNA: ENST00000560099.5

PSMA4-218, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 2,596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-218ENST00000560099 ATAD2Q6PL18 1390 aa26.3■■□□□ 1.8
PSMA4-218ENST00000560099 RWDD1Q9H446 243 aaPredicted RBP26.3■■□□□ 1.8
PSMA4-218ENST00000560099 TERF2IPQ9NYB0 399 aa26.3■■□□□ 1.8
PSMA4-218ENST00000560099 DZIP1LQ8IYY4 767 aaKnown RBP26.29■■□□□ 1.8
PSMA4-218ENST00000560099 ANKRD26Q9UPS8 1709 aa26.28■■□□□ 1.8
PSMA4-218ENST00000560099 FRAT2O75474 233 aaPredicted RBP26.28■■□□□ 1.8
PSMA4-218ENST00000560099 GSE1Q14687 1217 aa26.28■■□□□ 1.8
PSMA4-218ENST00000560099 CT47B1P0C2W7 299 aaPredicted RBP26.27■■□□□ 1.8
PSMA4-218ENST00000560099 FTSJ3Q8IY81 847 aaKnown RBP26.27■■□□□ 1.8
PSMA4-218ENST00000560099 SMC4Q9NTJ3 1288 aa26.27■■□□□ 1.8
PSMA4-218ENST00000560099 SSH1Q8WYL5 1049 aa26.27■■□□□ 1.8
PSMA4-218ENST00000560099 CLTCQ00610 1675 aaKnown RBP26.27■■□□□ 1.8
PSMA4-218ENST00000560099 TRIM27P14373 513 aa26.25■■□□□ 1.79
PSMA4-218ENST00000560099 MED14O60244 1454 aa26.25■■□□□ 1.79
PSMA4-218ENST00000560099 CDK19Q9BWU1 502 aa26.25■■□□□ 1.79
PSMA4-218ENST00000560099 IL27Q8NEV9 243 aa26.24■■□□□ 1.79
PSMA4-218ENST00000560099 RIPK4P57078 832 aa26.23■■□□□ 1.79
PSMA4-218ENST00000560099 CABP1Q9NZU7 370 aa26.23■■□□□ 1.79
PSMA4-218ENST00000560099 ALKQ9UM73 1620 aa26.23■■□□□ 1.79
PSMA4-218ENST00000560099 DIAPH1O60610 1272 aaKnown RBP26.22■■□□□ 1.79
PSMA4-218ENST00000560099 ZMYM3Q14202 1370 aa26.22■■□□□ 1.79
PSMA4-218ENST00000560099 ARHGEF40Q8TER5 1519 aa26.21■■□□□ 1.79
PSMA4-218ENST00000560099 PNPLA6Q8IY17 1366 aa26.21■■□□□ 1.79
PSMA4-218ENST00000560099 HDGFL2Q7Z4V5 671 aaPredicted RBP26.2■■□□□ 1.79
PSMA4-218ENST00000560099 FBLN1P23142 703 aa26.2■■□□□ 1.78
PSMA4-218ENST00000560099 IL16Q14005 1332 aa26.2■■□□□ 1.78
PSMA4-218ENST00000560099 NOB1Q9ULX3 412 aaKnown RBP26.19■■□□□ 1.78
PSMA4-218ENST00000560099 ATF7IPQ6VMQ6 1270 aa26.19■■□□□ 1.78
PSMA4-218ENST00000560099 TBC1D32Q96NH3 1257 aa26.18■■□□□ 1.78
PSMA4-218ENST00000560099 ITPRIPQ8IWB1 547 aa26.17■■□□□ 1.78
PSMA4-218ENST00000560099 KIF20BQ96Q89 1820 aa26.17■■□□□ 1.78
PSMA4-218ENST00000560099 BECN1Q14457 450 aa26.16■■□□□ 1.78
PSMA4-218ENST00000560099 STAG3Q9UJ98 1225 aa26.16■■□□□ 1.78
PSMA4-218ENST00000560099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.15■■□□□ 1.78
PSMA4-218ENST00000560099 DDX19BQ9UMR2 479 aa26.15■■□□□ 1.78
PSMA4-218ENST00000560099 WAPLQ7Z5K2 1190 aa26.15■■□□□ 1.78
PSMA4-218ENST00000560099 TMEM57Q8N5G2 664 aa26.14■■□□□ 1.77
PSMA4-218ENST00000560099 UPF2Q9HAU5 1272 aaKnown RBP26.14■■□□□ 1.77
PSMA4-218ENST00000560099 HDAC1Q13547 482 aaPredicted RBP26.13■■□□□ 1.77
PSMA4-218ENST00000560099 SLKQ9H2G2 1235 aaPredicted RBP26.13■■□□□ 1.77
PSMA4-218ENST00000560099 POLKQ9UBT6 870 aa26.12■■□□□ 1.77
PSMA4-218ENST00000560099 LRRC7Q96NW7 1537 aa26.12■■□□□ 1.77
PSMA4-218ENST00000560099 FCHSD2O94868 740 aa26.11■■□□□ 1.77
PSMA4-218ENST00000560099 PRKAR2BP31323 418 aa26.1■■□□□ 1.77
PSMA4-218ENST00000560099 RSPH6AQ9H0K4 717 aa26.1■■□□□ 1.77
PSMA4-218ENST00000560099 PNNQ9H307 717 aaKnown RBP26.1■■□□□ 1.77
PSMA4-218ENST00000560099 ZBTB40Q9NUA8 1239 aa26.09■■□□□ 1.77
PSMA4-218ENST00000560099 MAP2P11137 1827 aaKnown RBP26.09■■□□□ 1.77
PSMA4-218ENST00000560099 TBC1D2Q9BYX2 928 aa26.09■■□□□ 1.77
PSMA4-218ENST00000560099 ANTXR1Q9H6X2 564 aa26.08■■□□□ 1.77
PSMA4-218ENST00000560099 CDC42BPGQ6DT37 1551 aa26.08■■□□□ 1.77
PSMA4-218ENST00000560099 SMC5Q8IY18 1101 aa26.07■■□□□ 1.76
PSMA4-218ENST00000560099 BRPF3Q9ULD4 1205 aa26.07■■□□□ 1.76
PSMA4-218ENST00000560099 PHACTR3Q96KR7 559 aa26.07■■□□□ 1.76
PSMA4-218ENST00000560099 FAM135BQ49AJ0 1406 aa26.07■■□□□ 1.76
PSMA4-218ENST00000560099 KIF16BQ96L93 1317 aa26.07■■□□□ 1.76
PSMA4-218ENST00000560099 RTN4Q9NQC3 1192 aaKnown RBP26.06■■□□□ 1.76
PSMA4-218ENST00000560099 HMOX1P09601 288 aa26.05■■□□□ 1.76
PSMA4-218ENST00000560099 CYB5RLQ6IPT4 315 aa26.05■■□□□ 1.76
PSMA4-218ENST00000560099 A2ML1A8K2U0 1454 aa26.05■■□□□ 1.76
PSMA4-218ENST00000560099 IPO8O15397 1037 aaKnown RBP26.04■■□□□ 1.76
PSMA4-218ENST00000560099 ALDH1L2Q3SY69 923 aa26.04■■□□□ 1.76
PSMA4-218ENST00000560099 THUMPD2Q9BTF0 503 aaKnown RBP26.04■■□□□ 1.76
PSMA4-218ENST00000560099 SETD1AO15047 1707 aaKnown RBP26.03■■□□□ 1.76
PSMA4-218ENST00000560099 ATP7BP35670 1465 aa26.03■■□□□ 1.76
PSMA4-218ENST00000560099 DLC1Q96QB1 1528 aa26.03■■□□□ 1.76
PSMA4-218ENST00000560099 EMILIN1Q9Y6C2 1016 aa26.02■■□□□ 1.76
PSMA4-218ENST00000560099 FAM69CQ0P6D2 419 aa26.02■■□□□ 1.76
PSMA4-218ENST00000560099 MFAP1P55081 439 aaKnown RBP26.02■■□□□ 1.76
PSMA4-218ENST00000560099 RIMS2Q9UQ26 1411 aa26.01■■□□□ 1.76
PSMA4-218ENST00000560099 RIMBP3CA6NJZ7 1639 aa26■■□□□ 1.75
PSMA4-218ENST00000560099 RIMBP3BA6NNM3 1639 aa26■■□□□ 1.75
PSMA4-218ENST00000560099 RIMBP3Q9UFD9 1639 aa26■■□□□ 1.75
PSMA4-218ENST00000560099 NFE2L2Q16236 605 aa26■■□□□ 1.75
PSMA4-218ENST00000560099 C22orf23Q9BZE7 217 aa26■■□□□ 1.75
PSMA4-218ENST00000560099 ZRANB1Q9UGI0 708 aa26■■□□□ 1.75
PSMA4-218ENST00000560099 TSPOAP1O95153 1857 aa25.99■■□□□ 1.75
PSMA4-218ENST00000560099 NME9Q86XW9 330 aa25.99■■□□□ 1.75
PSMA4-218ENST00000560099 VAMP4O75379 141 aa25.98■■□□□ 1.75
PSMA4-218ENST00000560099 TSPYL6Q8N831 410 aa25.98■■□□□ 1.75
PSMA4-218ENST00000560099 PPIP5K1Q6PFW1 1433 aa25.97■■□□□ 1.75
PSMA4-218ENST00000560099 IL13P35225 146 aa25.97■■□□□ 1.75
PSMA4-218ENST00000560099 SPRYD3Q8NCJ5 442 aa25.97■■□□□ 1.75
PSMA4-218ENST00000560099 CPSF1Q10570 1443 aaKnown RBP25.97■■□□□ 1.75
PSMA4-218ENST00000560099 BRPF1P55201 1214 aaPredicted RBP25.97■■□□□ 1.75
PSMA4-218ENST00000560099 NUCB1Q02818 461 aa25.97■■□□□ 1.75
PSMA4-218ENST00000560099 MLECQ14165 292 aa25.96■■□□□ 1.75
PSMA4-218ENST00000560099 WASLO00401 505 aaPredicted RBP25.96■■□□□ 1.75
PSMA4-218ENST00000560099 SPATA31D1Q6ZQQ2 1576 aa25.95■■□□□ 1.75
PSMA4-218ENST00000560099 NCKAP5LQ9HCH0 1330 aa25.95■■□□□ 1.75
PSMA4-218ENST00000560099 LNPKQ9C0E8 428 aa25.95■■□□□ 1.74
PSMA4-218ENST00000560099 MRPL50Q8N5N7 158 aaKnown RBP25.95■■□□□ 1.74
PSMA4-218ENST00000560099 ZNF428Q96B54 188 aa25.94■■□□□ 1.74
PSMA4-218ENST00000560099 PPP6R1Q9UPN7 881 aa25.94■■□□□ 1.74
PSMA4-218ENST00000560099 ELL2O00472 640 aaPredicted RBP25.94■■□□□ 1.74
PSMA4-218ENST00000560099 AGLP35573 1532 aa25.94■■□□□ 1.74
PSMA4-218ENST00000560099 EDC4Q6P2E9 1401 aaKnown RBP25.93■■□□□ 1.74
PSMA4-218ENST00000560099 METP08581 1390 aa25.93■■□□□ 1.74
PSMA4-218ENST00000560099 ZBTB7BO15156 539 aaPredicted RBP25.93■■□□□ 1.74
PSMA4-218ENST00000560099 TXNDC2Q86VQ3 553 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms