RNA–Protein interactions for RNA: ENST00000559603.1

RNF213-208, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-208ENST00000559603 RALGAPBQ86X10 1494 aa22.91■■□□□ 1.26
RNF213-208ENST00000559603 CENPJQ9HC77 1338 aaPredicted RBP22.9■■□□□ 1.26
RNF213-208ENST00000559603 PHRF1Q9P1Y6 1649 aaKnown RBP22.9■■□□□ 1.26
RNF213-208ENST00000559603 HAP1P54257 671 aaPredicted RBP22.89■■□□□ 1.25
RNF213-208ENST00000559603 GJD4Q96KN9 370 aaPredicted RBP22.89■■□□□ 1.25
RNF213-208ENST00000559603 ACEP12821 1306 aa22.88■■□□□ 1.25
RNF213-208ENST00000559603 PAK3O75914 559 aaPredicted RBP22.88■■□□□ 1.25
RNF213-208ENST00000559603 POLR3AO14802 1390 aaPredicted RBP22.88■■□□□ 1.25
RNF213-208ENST00000559603 COL14A1Q05707 1796 aaKnown RBP22.86■■□□□ 1.25
RNF213-208ENST00000559603 CABP2Q9NPB3 220 aa22.86■■□□□ 1.25
RNF213-208ENST00000559603 PLEKHG3A1L390 1219 aa22.85■■□□□ 1.25
RNF213-208ENST00000559603 CCDC61Q9Y6R9 512 aa22.85■■□□□ 1.25
RNF213-208ENST00000559603 PPIP5K1Q6PFW1 1433 aa22.83■■□□□ 1.25
RNF213-208ENST00000559603 TRIM26Q12899 539 aaPredicted RBP22.83■■□□□ 1.25
RNF213-208ENST00000559603 NUTM2GQ5VZR2 741 aa22.83■■□□□ 1.25
RNF213-208ENST00000559603 ROCK2O75116 1388 aaKnown RBP22.82■■□□□ 1.24
RNF213-208ENST00000559603 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
RNF213-208ENST00000559603 VPS72Q15906 364 aa22.81■■□□□ 1.24
RNF213-208ENST00000559603 ATAD2Q6PL18 1390 aa22.78■■□□□ 1.24
RNF213-208ENST00000559603 NRKQ7Z2Y5 1582 aa22.78■■□□□ 1.24
RNF213-208ENST00000559603 BTG4Q9NY30 223 aa22.78■■□□□ 1.24
RNF213-208ENST00000559603 AKAP12Q02952 1782 aa22.78■■□□□ 1.24
RNF213-208ENST00000559603 CABP1Q9NZU7 370 aa22.76■■□□□ 1.23
RNF213-208ENST00000559603 KIAA0232Q92628 1395 aa22.76■■□□□ 1.23
RNF213-208ENST00000559603 CHRNA2Q15822 529 aa22.75■■□□□ 1.23
RNF213-208ENST00000559603 SEPT12Q8IYM1 358 aa22.74■■□□□ 1.23
RNF213-208ENST00000559603 CCDC9Q9Y3X0 531 aaKnown RBP22.74■■□□□ 1.23
RNF213-208ENST00000559603 PIK3C2AO00443 1686 aa22.74■■□□□ 1.23
RNF213-208ENST00000559603 ONECUT3O60422 494 aaPredicted RBP22.73■■□□□ 1.23
RNF213-208ENST00000559603 ZC3H6P61129 1189 aaKnown RBP22.73■■□□□ 1.23
RNF213-208ENST00000559603 PRDM11Q9NQV5 511 aa22.72■■□□□ 1.23
RNF213-208ENST00000559603 EVC2Q86UK5 1308 aa22.72■■□□□ 1.23
RNF213-208ENST00000559603 USP6P35125 1406 aa22.72■■□□□ 1.23
RNF213-208ENST00000559603 LMO7Q8WWI1 1683 aa22.71■■□□□ 1.23
RNF213-208ENST00000559603 ABTB2Q8N961 1025 aa22.71■■□□□ 1.23
RNF213-208ENST00000559603 USP19O94966 1318 aa22.71■■□□□ 1.23
RNF213-208ENST00000559603 TONSLQ96HA7 1378 aa22.71■■□□□ 1.23
RNF213-208ENST00000559603 SSH2Q76I76 1423 aa22.71■■□□□ 1.23
RNF213-208ENST00000559603 THSD7AQ9UPZ6 1657 aa22.69■■□□□ 1.22
RNF213-208ENST00000559603 CAMTA1Q9Y6Y1 1673 aa22.69■■□□□ 1.22
RNF213-208ENST00000559603 FAM98CQ17RN3 349 aaKnown RBP22.69■■□□□ 1.22
RNF213-208ENST00000559603 SPATA31A5Q5VU36 1347 aa22.68■■□□□ 1.22
RNF213-208ENST00000559603 SPATA31A7Q8IWB4 1347 aa22.68■■□□□ 1.22
RNF213-208ENST00000559603 CARD11Q9BXL7 1154 aa22.67■■□□□ 1.22
RNF213-208ENST00000559603 MON2Q7Z3U7 1717 aa22.67■■□□□ 1.22
RNF213-208ENST00000559603 RGPD5Q99666 1765 aa22.66■■□□□ 1.22
RNF213-208ENST00000559603 SLIT3O75094 1523 aa22.65■■□□□ 1.22
RNF213-208ENST00000559603 COL18A1P39060 1754 aa22.65■■□□□ 1.22
RNF213-208ENST00000559603 STRN4Q9NRL3 753 aa22.64■■□□□ 1.21
RNF213-208ENST00000559603 CPDO75976 1380 aa22.63■■□□□ 1.21
RNF213-208ENST00000559603 SBNO2Q9Y2G9 1366 aa22.63■■□□□ 1.21
RNF213-208ENST00000559603 GCP02774 474 aa22.63■■□□□ 1.21
RNF213-208ENST00000559603 FAM182BQ5T319 152 aa22.62■■□□□ 1.21
RNF213-208ENST00000559603 KRT27Q7Z3Y8 459 aa22.62■■□□□ 1.21
RNF213-208ENST00000559603 NLRP13Q86W25 1043 aa22.62■■□□□ 1.21
RNF213-208ENST00000559603 CPSF1Q10570 1443 aaKnown RBP22.62■■□□□ 1.21
RNF213-208ENST00000559603 BRD4O60885 1362 aaPredicted RBP22.62■■□□□ 1.21
RNF213-208ENST00000559603 SPATA31A1Q5TZJ5 1347 aa22.61■■□□□ 1.21
RNF213-208ENST00000559603 CD163L1Q9NR16 1453 aa22.61■■□□□ 1.21
RNF213-208ENST00000559603 NLRP6P59044 892 aa22.61■■□□□ 1.21
RNF213-208ENST00000559603 TTC21BQ7Z4L5 1316 aa22.59■■□□□ 1.21
RNF213-208ENST00000559603 A0A0G2JS52 829 aa22.59■■□□□ 1.21
RNF213-208ENST00000559603 MYT1Q01538 1121 aa22.59■■□□□ 1.21
RNF213-208ENST00000559603 BLMP54132 1417 aaPredicted RBP22.58■■□□□ 1.21
RNF213-208ENST00000559603 LARP1Q6PKG0 1096 aaKnown RBP22.58■■□□□ 1.21
RNF213-208ENST00000559603 DEFB132Q7Z7B7 95 aa22.57■■□□□ 1.2
RNF213-208ENST00000559603 ZRANB1Q9UGI0 708 aa22.57■■□□□ 1.2
RNF213-208ENST00000559603 COL5A2P05997 1499 aaPredicted RBP22.56■■□□□ 1.2
RNF213-208ENST00000559603 KTN1Q86UP2 1357 aaKnown RBP22.56■■□□□ 1.2
RNF213-208ENST00000559603 CCDC125Q86Z20 511 aa22.56■■□□□ 1.2
RNF213-208ENST00000559603 USP35Q9P2H5 1018 aa22.56■■□□□ 1.2
RNF213-208ENST00000559603 TNS1Q9HBL0 1735 aaKnown RBP22.55■■□□□ 1.2
RNF213-208ENST00000559603 TESK2Q96S53 571 aa22.55■■□□□ 1.2
RNF213-208ENST00000559603 SRCAPQ6ZRS2 3230 aa22.55■■□□□ 1.2
RNF213-208ENST00000559603 USP54Q70EL1 1684 aa22.55■■□□□ 1.2
RNF213-208ENST00000559603 NFAT5O94916 1531 aa22.54■■□□□ 1.2
RNF213-208ENST00000559603 ZBTB7CA1YPR0 619 aa22.54■■□□□ 1.2
RNF213-208ENST00000559603 ZNF692Q9BU19 519 aaPredicted RBP22.54■■□□□ 1.2
RNF213-208ENST00000559603 SLC12A5Q9H2X9 1139 aa22.54■■□□□ 1.2
RNF213-208ENST00000559603 ST20-MTHFSA0A0A6YYL1 179 aa22.53■■□□□ 1.2
RNF213-208ENST00000559603 EVA1CP58658 441 aa22.53■■□□□ 1.2
RNF213-208ENST00000559603 AXIN2Q9Y2T1 843 aa22.53■■□□□ 1.2
RNF213-208ENST00000559603 RGPD1P0DJD0 1748 aa22.53■■□□□ 1.2
RNF213-208ENST00000559603 WNK3Q9BYP7 1800 aa22.52■■□□□ 1.2
RNF213-208ENST00000559603 PARP4Q9UKK3 1724 aaKnown RBP22.51■■□□□ 1.19
RNF213-208ENST00000559603 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
RNF213-208ENST00000559603 LTN1O94822 1766 aa22.5■■□□□ 1.19
RNF213-208ENST00000559603 SOX12O15370 315 aa22.5■■□□□ 1.19
RNF213-208ENST00000559603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.5■■□□□ 1.19
RNF213-208ENST00000559603 TTC21AQ8NDW8 1320 aa22.5■■□□□ 1.19
RNF213-208ENST00000559603 TMC1Q8TDI8 760 aa22.49■■□□□ 1.19
RNF213-208ENST00000559603 BARGINQ6ZT62 677 aa22.48■■□□□ 1.19
RNF213-208ENST00000559603 ARHGEF25Q86VW2 580 aa22.48■■□□□ 1.19
RNF213-208ENST00000559603 NME9Q86XW9 330 aa22.48■■□□□ 1.19
RNF213-208ENST00000559603 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
RNF213-208ENST00000559603 A0A1W2PP64 1363 aa22.47■■□□□ 1.19
RNF213-208ENST00000559603 TCP11L2Q8N4U5 519 aa22.46■■□□□ 1.19
RNF213-208ENST00000559603 CRB1P82279 1406 aa22.46■■□□□ 1.19
RNF213-208ENST00000559603 USP31Q70CQ4 1352 aa22.45■■□□□ 1.18
RNF213-208ENST00000559603 LRRC37A3O60309 1634 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms