RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 DEFB132Q7Z7B7 95 aa8.54□□□□□ -1.04
USP3-212ENST00000559276 ITSN1Q15811 1721 aa8.54□□□□□ -1.04
USP3-212ENST00000559276 THSD7AQ9UPZ6 1657 aa8.53□□□□□ -1.04
USP3-212ENST00000559276 LMOD2Q6P5Q4 547 aa8.53□□□□□ -1.04
USP3-212ENST00000559276 PHRF1Q9P1Y6 1649 aaKnown RBP8.53□□□□□ -1.04
USP3-212ENST00000559276 KIAA1210Q9ULL0 1709 aa8.52□□□□□ -1.05
USP3-212ENST00000559276 BTG4Q9NY30 223 aa8.52□□□□□ -1.05
USP3-212ENST00000559276 ZRANB1Q9UGI0 708 aa8.52□□□□□ -1.05
USP3-212ENST00000559276 HAP1P54257 671 aaPredicted RBP8.51□□□□□ -1.05
USP3-212ENST00000559276 KRT27Q7Z3Y8 459 aa8.51□□□□□ -1.05
USP3-212ENST00000559276 STAC3Q96MF2 364 aa8.51□□□□□ -1.05
USP3-212ENST00000559276 TNS1Q9HBL0 1735 aaKnown RBP8.51□□□□□ -1.05
USP3-212ENST00000559276 POLR3AO14802 1390 aaPredicted RBP8.5□□□□□ -1.05
USP3-212ENST00000559276 EIF3AQ14152 1382 aaKnown RBP8.5□□□□□ -1.05
USP3-212ENST00000559276 GPRASP1Q5JY77 1395 aa8.5□□□□□ -1.05
USP3-212ENST00000559276 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
USP3-212ENST00000559276 NUDT16Q96DE0 195 aaKnown RBP8.5□□□□□ -1.05
USP3-212ENST00000559276 SPATA31A5Q5VU36 1347 aa8.5□□□□□ -1.05
USP3-212ENST00000559276 SPATA31A7Q8IWB4 1347 aa8.5□□□□□ -1.05
USP3-212ENST00000559276 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
USP3-212ENST00000559276 FAM182BQ5T319 152 aa8.49□□□□□ -1.05
USP3-212ENST00000559276 CDK19Q9BWU1 502 aa8.49□□□□□ -1.05
USP3-212ENST00000559276 CCDC9Q9Y3X0 531 aaKnown RBP8.49□□□□□ -1.05
USP3-212ENST00000559276 LRP5O75197 1615 aa8.49□□□□□ -1.05
USP3-212ENST00000559276 LMO7Q8WWI1 1683 aa8.49□□□□□ -1.05
USP3-212ENST00000559276 RGPD1P0DJD0 1748 aa8.49□□□□□ -1.05
USP3-212ENST00000559276 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
USP3-212ENST00000559276 NRKQ7Z2Y5 1582 aa8.48□□□□□ -1.05
USP3-212ENST00000559276 NGDNQ8NEJ9 315 aaKnown RBP8.48□□□□□ -1.05
USP3-212ENST00000559276 CAMTA1Q9Y6Y1 1673 aa8.48□□□□□ -1.05
USP3-212ENST00000559276 PLEKHG3A1L390 1219 aa8.47□□□□□ -1.05
USP3-212ENST00000559276 PAK3O75914 559 aaPredicted RBP8.47□□□□□ -1.05
USP3-212ENST00000559276 CHRNA2Q15822 529 aa8.47□□□□□ -1.05
USP3-212ENST00000559276 NBPF8Q3BBV2 869 aa8.47□□□□□ -1.05
USP3-212ENST00000559276 NUTM2GQ5VZR2 741 aa8.47□□□□□ -1.05
USP3-212ENST00000559276 ACEP12821 1306 aa8.47□□□□□ -1.05
USP3-212ENST00000559276 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
USP3-212ENST00000559276 DISP2A7MBM2 1401 aa8.46□□□□□ -1.05
USP3-212ENST00000559276 CENPBP07199 599 aaPredicted RBP8.46□□□□□ -1.06
USP3-212ENST00000559276 PRDM11Q9NQV5 511 aa8.46□□□□□ -1.06
USP3-212ENST00000559276 QRICH2Q9H0J4 1663 aa8.46□□□□□ -1.06
USP3-212ENST00000559276 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
USP3-212ENST00000559276 EN1Q05925 392 aaPredicted RBP8.45□□□□□ -1.06
USP3-212ENST00000559276 CCDC61Q9Y6R9 512 aa8.45□□□□□ -1.06
USP3-212ENST00000559276 USP19O94966 1318 aa8.45□□□□□ -1.06
USP3-212ENST00000559276 CPDO75976 1380 aa8.45□□□□□ -1.06
USP3-212ENST00000559276 SSH2Q76I76 1423 aa8.45□□□□□ -1.06
USP3-212ENST00000559276 RREB1Q92766 1687 aa8.44□□□□□ -1.06
USP3-212ENST00000559276 A0A0G2JS52 829 aa8.44□□□□□ -1.06
USP3-212ENST00000559276 PSDA5PKW4 1024 aaPredicted RBP8.44□□□□□ -1.06
USP3-212ENST00000559276 SF3B2Q13435 895 aaKnown RBP8.44□□□□□ -1.06
USP3-212ENST00000559276 PPIP5K1Q6PFW1 1433 aa8.44□□□□□ -1.06
USP3-212ENST00000559276 TRPM1Q7Z4N2 1603 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 COL18A1P39060 1754 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 BAG6P46379 1132 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 LARP1Q6PKG0 1096 aaKnown RBP8.43□□□□□ -1.06
USP3-212ENST00000559276 CAMKK2Q96RR4 588 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 CABP2Q9NPB3 220 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 SLIT3O75094 1523 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 PIK3C2AO00443 1686 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 NUP188Q5SRE5 1749 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 PEAK1Q9H792 1746 aa8.43□□□□□ -1.06
USP3-212ENST00000559276 PARP4Q9UKK3 1724 aaKnown RBP8.43□□□□□ -1.06
USP3-212ENST00000559276 EZH2Q15910 746 aaKnown RBP8.42□□□□□ -1.06
USP3-212ENST00000559276 BARGINQ6ZT62 677 aa8.42□□□□□ -1.06
USP3-212ENST00000559276 ABTB2Q8N961 1025 aa8.42□□□□□ -1.06
USP3-212ENST00000559276 CENPJQ9HC77 1338 aaPredicted RBP8.42□□□□□ -1.06
USP3-212ENST00000559276 COL5A2P05997 1499 aaPredicted RBP8.42□□□□□ -1.06
USP3-212ENST00000559276 AKAP12Q02952 1782 aa8.41□□□□□ -1.06
USP3-212ENST00000559276 USP6P35125 1406 aa8.41□□□□□ -1.06
USP3-212ENST00000559276 TRIM37O94972 964 aa8.41□□□□□ -1.06
USP3-212ENST00000559276 GCP02774 474 aa8.41□□□□□ -1.06
USP3-212ENST00000559276 CCER1Q8TC90 406 aaPredicted RBP8.41□□□□□ -1.06
USP3-212ENST00000559276 L3MBTL2Q969R5 705 aa8.41□□□□□ -1.06
USP3-212ENST00000559276 USP35Q9P2H5 1018 aa8.41□□□□□ -1.06
USP3-212ENST00000559276 WNK3Q9BYP7 1800 aa8.4□□□□□ -1.06
USP3-212ENST00000559276 LRRC37A3O60309 1634 aa8.4□□□□□ -1.06
USP3-212ENST00000559276 SRPK2P78362 688 aaKnown RBP8.4□□□□□ -1.06
USP3-212ENST00000559276 R3HDM1Q15032 1099 aaKnown RBP8.4□□□□□ -1.06
USP3-212ENST00000559276 FAM196AQ6ZSG2 479 aa8.4□□□□□ -1.06
USP3-212ENST00000559276 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
USP3-212ENST00000559276 SBF2Q86WG5 1849 aa8.4□□□□□ -1.07
USP3-212ENST00000559276 RGPD5Q99666 1765 aa8.4□□□□□ -1.07
USP3-212ENST00000559276 NLRP13Q86W25 1043 aa8.39□□□□□ -1.07
USP3-212ENST00000559276 TCP11L2Q8N4U5 519 aa8.39□□□□□ -1.07
USP3-212ENST00000559276 SIN3AQ96ST3 1273 aa8.39□□□□□ -1.07
USP3-212ENST00000559276 BRD4O60885 1362 aaPredicted RBP8.38□□□□□ -1.07
USP3-212ENST00000559276 AATKQ6ZMQ8 1374 aa8.38□□□□□ -1.07
USP3-212ENST00000559276 EVA1CP58658 441 aa8.38□□□□□ -1.07
USP3-212ENST00000559276 AXIN2Q9Y2T1 843 aa8.38□□□□□ -1.07
USP3-212ENST00000559276 CRB1P82279 1406 aa8.37□□□□□ -1.07
USP3-212ENST00000559276 PARD3Q8TEW0 1356 aa8.37□□□□□ -1.07
USP3-212ENST00000559276 APBA3O96018 575 aa8.37□□□□□ -1.07
USP3-212ENST00000559276 PTF1AQ7RTS3 328 aa8.37□□□□□ -1.07
USP3-212ENST00000559276 THRAP3Q9Y2W1 955 aaKnown RBP8.37□□□□□ -1.07
USP3-212ENST00000559276 NFAT5O94916 1531 aa8.37□□□□□ -1.07
USP3-212ENST00000559276 RGPD3A6NKT7 1758 aaPredicted RBP8.37□□□□□ -1.07
USP3-212ENST00000559276 RGPD4Q7Z3J3 1758 aa8.37□□□□□ -1.07
USP3-212ENST00000559276 MON2Q7Z3U7 1717 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms