RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 PSME1Q06323 249 aa16.08■□□□□ 0.16
SNX1-204ENST00000559061 SPATA31A6Q5VVP1 1343 aa16.08■□□□□ 0.16
SNX1-204ENST00000559061 A0A1W2PP64 1363 aa16.08■□□□□ 0.16
SNX1-204ENST00000559061 TMF1P82094 1093 aa16.07■□□□□ 0.16
SNX1-204ENST00000559061 ARHGEF10O15013 1369 aa16.04■□□□□ 0.16
SNX1-204ENST00000559061 NINLQ9Y2I6 1382 aa16.04■□□□□ 0.16
SNX1-204ENST00000559061 CABLES1Q8TDN4 633 aa16.04■□□□□ 0.16
SNX1-204ENST00000559061 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
SNX1-204ENST00000559061 SLIT3O75094 1523 aa16.04■□□□□ 0.16
SNX1-204ENST00000559061 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
SNX1-204ENST00000559061 BRD4O60885 1362 aaPredicted RBP16.02■□□□□ 0.16
SNX1-204ENST00000559061 KTN1Q86UP2 1357 aaKnown RBP16.02■□□□□ 0.16
SNX1-204ENST00000559061 ANKRD36BQ8N2N9 1353 aa16.02■□□□□ 0.16
SNX1-204ENST00000559061 USP19O94966 1318 aa16.02■□□□□ 0.16
SNX1-204ENST00000559061 TTC21BQ7Z4L5 1316 aa16.02■□□□□ 0.16
SNX1-204ENST00000559061 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.16
SNX1-204ENST00000559061 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.16
SNX1-204ENST00000559061 NUTM2AQ8IVF1 878 aaPredicted RBP16.02■□□□□ 0.16
SNX1-204ENST00000559061 PLCH1Q4KWH8 1693 aa16.02■□□□□ 0.15
SNX1-204ENST00000559061 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
SNX1-204ENST00000559061 TMC1Q8TDI8 760 aa16.01■□□□□ 0.15
SNX1-204ENST00000559061 EDC4Q6P2E9 1401 aaKnown RBP16.01■□□□□ 0.15
SNX1-204ENST00000559061 NRAPQ86VF7 1730 aa16■□□□□ 0.15
SNX1-204ENST00000559061 SLC24A1O60721 1099 aa16■□□□□ 0.15
SNX1-204ENST00000559061 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
SNX1-204ENST00000559061 NUTM2GQ5VZR2 741 aa16■□□□□ 0.15
SNX1-204ENST00000559061 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
SNX1-204ENST00000559061 KIF20BQ96Q89 1820 aa16■□□□□ 0.15
SNX1-204ENST00000559061 NFAT5O94916 1531 aa15.99■□□□□ 0.15
SNX1-204ENST00000559061 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
SNX1-204ENST00000559061 OVOS2A0A0J9YW53 1432 aa15.98■□□□□ 0.15
SNX1-204ENST00000559061 OVOS2Q6IE36 1432 aa15.98■□□□□ 0.15
SNX1-204ENST00000559061 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
SNX1-204ENST00000559061 LMO7Q8WWI1 1683 aa15.98■□□□□ 0.15
SNX1-204ENST00000559061 COL18A1P39060 1754 aa15.98■□□□□ 0.15
SNX1-204ENST00000559061 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
SNX1-204ENST00000559061 ADAMTS2O95450 1211 aa15.97■□□□□ 0.15
SNX1-204ENST00000559061 LMOD2Q6P5Q4 547 aa15.97■□□□□ 0.15
SNX1-204ENST00000559061 NME9Q86XW9 330 aa15.97■□□□□ 0.15
SNX1-204ENST00000559061 SLIT2O94813 1529 aa15.97■□□□□ 0.15
SNX1-204ENST00000559061 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
SNX1-204ENST00000559061 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.97■□□□□ 0.15
SNX1-204ENST00000559061 WASHC2AQ641Q2 1341 aa15.96■□□□□ 0.15
SNX1-204ENST00000559061 TTC21AQ8NDW8 1320 aa15.96■□□□□ 0.15
SNX1-204ENST00000559061 CDCA8Q53HL2 280 aa15.96■□□□□ 0.15
SNX1-204ENST00000559061 ABTB2Q8N961 1025 aa15.96■□□□□ 0.15
SNX1-204ENST00000559061 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
SNX1-204ENST00000559061 NWD2Q9ULI1 1742 aa15.96■□□□□ 0.15
SNX1-204ENST00000559061 BCL9LQ86UU0 1499 aa15.96■□□□□ 0.14
SNX1-204ENST00000559061 COL14A1Q05707 1796 aaKnown RBP15.95■□□□□ 0.14
SNX1-204ENST00000559061 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
SNX1-204ENST00000559061 NSD3Q9BZ95 1437 aa15.94■□□□□ 0.14
SNX1-204ENST00000559061 HDGFL2Q7Z4V5 671 aaPredicted RBP15.94■□□□□ 0.14
SNX1-204ENST00000559061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.94■□□□□ 0.14
SNX1-204ENST00000559061 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
SNX1-204ENST00000559061 ANKRD26Q9UPS8 1709 aa15.93■□□□□ 0.14
SNX1-204ENST00000559061 AFF2P51816 1311 aa15.93■□□□□ 0.14
SNX1-204ENST00000559061 LTN1O94822 1766 aa15.92■□□□□ 0.14
SNX1-204ENST00000559061 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
SNX1-204ENST00000559061 FAM83GA6ND36 823 aa15.92■□□□□ 0.14
SNX1-204ENST00000559061 POTEAQ6S8J7 498 aa15.92■□□□□ 0.14
SNX1-204ENST00000559061 FNBP4Q8N3X1 1017 aaPredicted RBP15.92■□□□□ 0.14
SNX1-204ENST00000559061 RGPD5Q99666 1765 aa15.92■□□□□ 0.14
SNX1-204ENST00000559061 CPDO75976 1380 aa15.91■□□□□ 0.14
SNX1-204ENST00000559061 NLRP6P59044 892 aa15.91■□□□□ 0.14
SNX1-204ENST00000559061 POLR3GLQ9BT43 218 aa15.91■□□□□ 0.14
SNX1-204ENST00000559061 CAMTA1Q9Y6Y1 1673 aa15.9■□□□□ 0.14
SNX1-204ENST00000559061 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
SNX1-204ENST00000559061 ATRNO75882 1429 aa15.9■□□□□ 0.14
SNX1-204ENST00000559061 GLI3P10071 1580 aa15.89■□□□□ 0.13
SNX1-204ENST00000559061 FYB1O15117 783 aa15.89■□□□□ 0.13
SNX1-204ENST00000559061 GCP02774 474 aa15.89■□□□□ 0.13
SNX1-204ENST00000559061 NLRP13Q86W25 1043 aa15.89■□□□□ 0.13
SNX1-204ENST00000559061 PANK3Q9H999 370 aa15.89■□□□□ 0.13
SNX1-204ENST00000559061 PEAK1Q9H792 1746 aa15.88■□□□□ 0.13
SNX1-204ENST00000559061 ZEB1P37275 1124 aaPredicted RBP15.87■□□□□ 0.13
SNX1-204ENST00000559061 ZC3H6P61129 1189 aaKnown RBP15.87■□□□□ 0.13
SNX1-204ENST00000559061 CHRNA2Q15822 529 aa15.87■□□□□ 0.13
SNX1-204ENST00000559061 ILDR2Q71H61 639 aa15.87■□□□□ 0.13
SNX1-204ENST00000559061 FBLN1P23142 703 aa15.86■□□□□ 0.13
SNX1-204ENST00000559061 NGLY1Q96IV0 654 aa15.86■□□□□ 0.13
SNX1-204ENST00000559061 GGNBP2Q9H3C7 697 aa15.86■□□□□ 0.13
SNX1-204ENST00000559061 ABCC6O95255 1503 aa15.85■□□□□ 0.13
SNX1-204ENST00000559061 PER1O15534 1290 aaPredicted RBP15.85■□□□□ 0.13
SNX1-204ENST00000559061 ARHGEF25Q86VW2 580 aa15.85■□□□□ 0.13
SNX1-204ENST00000559061 COL5A2P05997 1499 aaPredicted RBP15.84■□□□□ 0.13
SNX1-204ENST00000559061 HAP1P54257 671 aaPredicted RBP15.84■□□□□ 0.13
SNX1-204ENST00000559061 USP21Q9UK80 565 aa15.84■□□□□ 0.13
SNX1-204ENST00000559061 SOX12O15370 315 aa15.83■□□□□ 0.12
SNX1-204ENST00000559061 PRDM11Q9NQV5 511 aa15.83■□□□□ 0.12
SNX1-204ENST00000559061 AXIN2Q9Y2T1 843 aa15.83■□□□□ 0.12
SNX1-204ENST00000559061 AATKQ6ZMQ8 1374 aa15.83■□□□□ 0.12
SNX1-204ENST00000559061 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
SNX1-204ENST00000559061 UNC5CLQ8IV45 518 aa15.82■□□□□ 0.12
SNX1-204ENST00000559061 BTG4Q9NY30 223 aa15.82■□□□□ 0.12
SNX1-204ENST00000559061 ZNF772Q68DY9 489 aaPredicted RBP15.81■□□□□ 0.12
SNX1-204ENST00000559061 WNK3Q9BYP7 1800 aa15.81■□□□□ 0.12
SNX1-204ENST00000559061 RGS12O14924 1447 aa15.8■□□□□ 0.12
SNX1-204ENST00000559061 KCNH5Q8NCM2 988 aa15.8■□□□□ 0.12
SNX1-204ENST00000559061 MAP2P11137 1827 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms