RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 AKAP12Q02952 1782 aa16.07■□□□□ 0.16
BMP4-204ENST00000558961 COL14A1Q05707 1796 aaKnown RBP16.07■□□□□ 0.16
BMP4-204ENST00000558961 RBM6P78332 1123 aaKnown RBP16.06■□□□□ 0.16
BMP4-204ENST00000558961 QTRT2Q9H974 415 aaKnown RBP16.06■□□□□ 0.16
BMP4-204ENST00000558961 GLI3P10071 1580 aa16.05■□□□□ 0.16
BMP4-204ENST00000558961 BRD4O60885 1362 aaPredicted RBP16.05■□□□□ 0.16
BMP4-204ENST00000558961 ACEP12821 1306 aa16.05■□□□□ 0.16
BMP4-204ENST00000558961 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
BMP4-204ENST00000558961 TRPC5Q9UL62 973 aaPredicted RBP16.05■□□□□ 0.16
BMP4-204ENST00000558961 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
BMP4-204ENST00000558961 CABLES1Q8TDN4 633 aa16.04■□□□□ 0.16
BMP4-204ENST00000558961 EVC2Q86UK5 1308 aa16.03■□□□□ 0.16
BMP4-204ENST00000558961 SRPK2P78362 688 aaKnown RBP16.03■□□□□ 0.16
BMP4-204ENST00000558961 USP6P35125 1406 aa16.02■□□□□ 0.16
BMP4-204ENST00000558961 MON2Q7Z3U7 1717 aa16.02■□□□□ 0.16
BMP4-204ENST00000558961 CABP2Q9NPB3 220 aa16.02■□□□□ 0.16
BMP4-204ENST00000558961 LMOD2Q6P5Q4 547 aa16.01■□□□□ 0.15
BMP4-204ENST00000558961 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
BMP4-204ENST00000558961 PIK3C2AO00443 1686 aa16.01■□□□□ 0.15
BMP4-204ENST00000558961 SSH2Q76I76 1423 aa16.01■□□□□ 0.15
BMP4-204ENST00000558961 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
BMP4-204ENST00000558961 UNC5CLQ8IV45 518 aa16■□□□□ 0.15
BMP4-204ENST00000558961 ATAD2Q6PL18 1390 aa16■□□□□ 0.15
BMP4-204ENST00000558961 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
BMP4-204ENST00000558961 LMO7Q8WWI1 1683 aa15.99■□□□□ 0.15
BMP4-204ENST00000558961 USP19O94966 1318 aa15.98■□□□□ 0.15
BMP4-204ENST00000558961 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
BMP4-204ENST00000558961 CPSF1Q10570 1443 aaKnown RBP15.98■□□□□ 0.15
BMP4-204ENST00000558961 GJD4Q96KN9 370 aaPredicted RBP15.98■□□□□ 0.15
BMP4-204ENST00000558961 SLIT3O75094 1523 aa15.98■□□□□ 0.15
BMP4-204ENST00000558961 TIMELESSQ9UNS1 1208 aa15.97■□□□□ 0.15
BMP4-204ENST00000558961 BRWD3Q6RI45 1802 aa15.96■□□□□ 0.15
BMP4-204ENST00000558961 FAM83GA6ND36 823 aa15.96■□□□□ 0.15
BMP4-204ENST00000558961 VPS72Q15906 364 aa15.96■□□□□ 0.15
BMP4-204ENST00000558961 CABP1Q9NZU7 370 aa15.96■□□□□ 0.15
BMP4-204ENST00000558961 CPDO75976 1380 aa15.95■□□□□ 0.14
BMP4-204ENST00000558961 CD163L1Q9NR16 1453 aa15.95■□□□□ 0.14
BMP4-204ENST00000558961 THSD7AQ9UPZ6 1657 aa15.93■□□□□ 0.14
BMP4-204ENST00000558961 KIAA0232Q92628 1395 aa15.93■□□□□ 0.14
BMP4-204ENST00000558961 UPF1Q92900 1129 aaKnown RBP eCLIP15.93■□□□□ 0.14
BMP4-204ENST00000558961 PUS7Q96PZ0 661 aaKnown RBP15.93■□□□□ 0.14
BMP4-204ENST00000558961 PLEKHG5O94827 1062 aa15.92■□□□□ 0.14
BMP4-204ENST00000558961 ABTB2Q8N961 1025 aa15.92■□□□□ 0.14
BMP4-204ENST00000558961 TESK2Q96S53 571 aa15.92■□□□□ 0.14
BMP4-204ENST00000558961 NLRP13Q86W25 1043 aa15.91■□□□□ 0.14
BMP4-204ENST00000558961 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
BMP4-204ENST00000558961 PRDM11Q9NQV5 511 aa15.91■□□□□ 0.14
BMP4-204ENST00000558961 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
BMP4-204ENST00000558961 COL18A1P39060 1754 aa15.9■□□□□ 0.14
BMP4-204ENST00000558961 CAMTA1Q9Y6Y1 1673 aa15.9■□□□□ 0.14
BMP4-204ENST00000558961 ONECUT3O60422 494 aaPredicted RBP15.9■□□□□ 0.14
BMP4-204ENST00000558961 TTC21AQ8NDW8 1320 aa15.9■□□□□ 0.14
BMP4-204ENST00000558961 USP47Q96K76 1375 aa15.89■□□□□ 0.13
BMP4-204ENST00000558961 NINLQ9Y2I6 1382 aa15.89■□□□□ 0.13
BMP4-204ENST00000558961 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
BMP4-204ENST00000558961 KTN1Q86UP2 1357 aaKnown RBP15.88■□□□□ 0.13
BMP4-204ENST00000558961 EP400Q96L91 3159 aa15.88■□□□□ 0.13
BMP4-204ENST00000558961 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
BMP4-204ENST00000558961 SLC24A1O60721 1099 aa15.88■□□□□ 0.13
BMP4-204ENST00000558961 TTC21BQ7Z4L5 1316 aa15.88■□□□□ 0.13
BMP4-204ENST00000558961 NFAT5O94916 1531 aa15.88■□□□□ 0.13
BMP4-204ENST00000558961 GCP02774 474 aa15.87■□□□□ 0.13
BMP4-204ENST00000558961 ABCC6O95255 1503 aa15.87■□□□□ 0.13
BMP4-204ENST00000558961 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
BMP4-204ENST00000558961 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
BMP4-204ENST00000558961 EDC4Q6P2E9 1401 aaKnown RBP15.86■□□□□ 0.13
BMP4-204ENST00000558961 ZC3H6P61129 1189 aaKnown RBP15.86■□□□□ 0.13
BMP4-204ENST00000558961 MYOM1P52179 1685 aa15.86■□□□□ 0.13
BMP4-204ENST00000558961 COL5A2P05997 1499 aaPredicted RBP15.85■□□□□ 0.13
BMP4-204ENST00000558961 NLRP6P59044 892 aa15.85■□□□□ 0.13
BMP4-204ENST00000558961 CHRNA2Q15822 529 aa15.85■□□□□ 0.13
BMP4-204ENST00000558961 A0A1W2PP64 1363 aa15.85■□□□□ 0.13
BMP4-204ENST00000558961 USP31Q70CQ4 1352 aa15.85■□□□□ 0.13
BMP4-204ENST00000558961 WNK3Q9BYP7 1800 aa15.84■□□□□ 0.13
BMP4-204ENST00000558961 AATKQ6ZMQ8 1374 aa15.84■□□□□ 0.13
BMP4-204ENST00000558961 RGPD5Q99666 1765 aa15.83■□□□□ 0.12
BMP4-204ENST00000558961 SEPT12Q8IYM1 358 aa15.83■□□□□ 0.12
BMP4-204ENST00000558961 CCDC9Q9Y3X0 531 aaKnown RBP15.83■□□□□ 0.12
BMP4-204ENST00000558961 SPATA31A1Q5TZJ5 1347 aa15.83■□□□□ 0.12
BMP4-204ENST00000558961 PARP4Q9UKK3 1724 aaKnown RBP15.82■□□□□ 0.12
BMP4-204ENST00000558961 LTN1O94822 1766 aa15.82■□□□□ 0.12
BMP4-204ENST00000558961 SLC12A5Q9H2X9 1139 aa15.82■□□□□ 0.12
BMP4-204ENST00000558961 OVOS2A0A0J9YW53 1432 aa15.82■□□□□ 0.12
BMP4-204ENST00000558961 OVOS2Q6IE36 1432 aa15.82■□□□□ 0.12
BMP4-204ENST00000558961 FAM98CQ17RN3 349 aaKnown RBP15.8■□□□□ 0.12
BMP4-204ENST00000558961 HDGFL2Q7Z4V5 671 aaPredicted RBP15.8■□□□□ 0.12
BMP4-204ENST00000558961 KCNH5Q8NCM2 988 aa15.8■□□□□ 0.12
BMP4-204ENST00000558961 TERF2IPQ9NYB0 399 aa15.8■□□□□ 0.12
BMP4-204ENST00000558961 BLMP54132 1417 aaPredicted RBP15.79■□□□□ 0.12
BMP4-204ENST00000558961 CRB1P82279 1406 aa15.79■□□□□ 0.12
BMP4-204ENST00000558961 ANKRD36BQ8N2N9 1353 aa15.79■□□□□ 0.12
BMP4-204ENST00000558961 ZEB1P37275 1124 aaPredicted RBP15.79■□□□□ 0.12
BMP4-204ENST00000558961 TMF1P82094 1093 aa15.79■□□□□ 0.12
BMP4-204ENST00000558961 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
BMP4-204ENST00000558961 RGPD1P0DJD0 1748 aa15.79■□□□□ 0.12
BMP4-204ENST00000558961 BARGINQ6ZT62 677 aa15.78■□□□□ 0.12
BMP4-204ENST00000558961 KRT27Q7Z3Y8 459 aa15.78■□□□□ 0.12
BMP4-204ENST00000558961 ARHGEF25Q86VW2 580 aa15.78■□□□□ 0.12
BMP4-204ENST00000558961 CCDC125Q86Z20 511 aa15.78■□□□□ 0.12
BMP4-204ENST00000558961 TMC1Q8TDI8 760 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 281.1 ms