RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 GOPCQ9HD26 462 aa8.84□□□□□ -0.99
CASC4-206ENST00000558847 WFS1O76024 890 aa8.83□□□□□ -1
CASC4-206ENST00000558847 SENP2Q9HC62 589 aa8.83□□□□□ -1
CASC4-206ENST00000558847 POLR3EQ9NVU0 708 aa8.83□□□□□ -1
CASC4-206ENST00000558847 WASF2Q9Y6W5 498 aa8.83□□□□□ -1
CASC4-206ENST00000558847 QPCTQ16769 361 aa8.82□□□□□ -1
CASC4-206ENST00000558847 PRR7Q8TB68 274 aa8.82□□□□□ -1
CASC4-206ENST00000558847 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.82□□□□□ -1
CASC4-206ENST00000558847 MTMR2Q13614 643 aa8.81□□□□□ -1
CASC4-206ENST00000558847 PRPF38BQ5VTL8 546 aaKnown RBP8.81□□□□□ -1
CASC4-206ENST00000558847 FBXO31Q5XUX0 539 aaPredicted RBP8.81□□□□□ -1
CASC4-206ENST00000558847 CABLES1Q8TDN4 633 aa8.81□□□□□ -1
CASC4-206ENST00000558847 LILRB3O75022 631 aa8.8□□□□□ -1
CASC4-206ENST00000558847 SNRPBP14678 240 aaKnown RBP8.8□□□□□ -1
CASC4-206ENST00000558847 HRCP23327 699 aa8.8□□□□□ -1
CASC4-206ENST00000558847 PTPRNQ16849 979 aa8.8□□□□□ -1
CASC4-206ENST00000558847 CSPP1Q1MSJ5 1256 aa8.8□□□□□ -1
CASC4-206ENST00000558847 LINC01559Q495D7 138 aa8.8□□□□□ -1
CASC4-206ENST00000558847 PROCA1Q8NCQ7 364 aaPredicted RBP8.8□□□□□ -1
CASC4-206ENST00000558847 ZBTB3Q9H5J0 574 aa8.8□□□□□ -1
CASC4-206ENST00000558847 TRIM47Q96LD4 638 aa8.79□□□□□ -1
CASC4-206ENST00000558847 UNC93B1Q9H1C4 597 aa8.79□□□□□ -1
CASC4-206ENST00000558847 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
CASC4-206ENST00000558847 SH3BP2P78314 561 aa8.78□□□□□ -1
CASC4-206ENST00000558847 KIFC2Q96AC6 838 aa8.78□□□□□ -1
CASC4-206ENST00000558847 EVA1BQ9NVM1 165 aa8.78□□□□□ -1
CASC4-206ENST00000558847 CFAP99D6REC4 459 aa8.77□□□□□ -1.01
CASC4-206ENST00000558847 CTHP32929 405 aa8.77□□□□□ -1.01
CASC4-206ENST00000558847 KCNH2Q12809 1159 aa8.77□□□□□ -1.01
CASC4-206ENST00000558847 BAP1Q92560 729 aa8.77□□□□□ -1.01
CASC4-206ENST00000558847 CAPN5O15484 640 aaPredicted RBP8.76□□□□□ -1.01
CASC4-206ENST00000558847 SIAH2O43255 324 aa8.76□□□□□ -1.01
CASC4-206ENST00000558847 RTL5Q5HYW3 569 aaPredicted RBP8.75□□□□□ -1.01
CASC4-206ENST00000558847 LCE2AQ5TA79 106 aaPredicted RBP8.75□□□□□ -1.01
CASC4-206ENST00000558847 PPP2R2DQ66LE6 453 aa8.75□□□□□ -1.01
CASC4-206ENST00000558847 PCMTD1Q96MG8 357 aaPredicted RBP8.75□□□□□ -1.01
CASC4-206ENST00000558847 BMP1P13497 986 aa8.74□□□□□ -1.01
CASC4-206ENST00000558847 NFX1Q12986 1120 aaKnown RBP8.74□□□□□ -1.01
CASC4-206ENST00000558847 TLL2Q9Y6L7 1015 aa8.74□□□□□ -1.01
CASC4-206ENST00000558847 TERTO14746 1132 aaKnown RBP8.73□□□□□ -1.01
CASC4-206ENST00000558847 DESI1Q6ICB0 168 aa8.73□□□□□ -1.01
CASC4-206ENST00000558847 ZNF511Q8NB15 262 aa8.73□□□□□ -1.01
CASC4-206ENST00000558847 TSC1Q92574 1164 aa8.72□□□□□ -1.01
CASC4-206ENST00000558847 NUTM2BA6NNL0 878 aaPredicted RBP8.71□□□□□ -1.02
CASC4-206ENST00000558847 NUTM2EB1AL46 878 aaPredicted RBP8.71□□□□□ -1.02
CASC4-206ENST00000558847 VARSP26640 1264 aaKnown RBP8.71□□□□□ -1.02
CASC4-206ENST00000558847 NUTM2DQ5VT03 806 aaPredicted RBP8.71□□□□□ -1.02
CASC4-206ENST00000558847 NUTM2AQ8IVF1 878 aaPredicted RBP8.71□□□□□ -1.02
CASC4-206ENST00000558847 RFC5P40937 340 aa8.7□□□□□ -1.02
CASC4-206ENST00000558847 INSM1Q01101 510 aaPredicted RBP8.69□□□□□ -1.02
CASC4-206ENST00000558847 AGERQ15109 404 aa8.69□□□□□ -1.02
CASC4-206ENST00000558847 LYPD8Q6UX82 237 aa8.69□□□□□ -1.02
CASC4-206ENST00000558847 TRIM46Q7Z4K8 759 aa8.69□□□□□ -1.02
CASC4-206ENST00000558847 SLC16A10Q8TF71 515 aa8.69□□□□□ -1.02
CASC4-206ENST00000558847 PER1O15534 1290 aaPredicted RBP8.68□□□□□ -1.02
CASC4-206ENST00000558847 NNTQ13423 1086 aa8.68□□□□□ -1.02
CASC4-206ENST00000558847 ARID5BQ14865 1188 aa8.68□□□□□ -1.02
CASC4-206ENST00000558847 FAM174AQ8TBP5 190 aa8.68□□□□□ -1.02
CASC4-206ENST00000558847 MAP10Q9P2G4 905 aa8.67□□□□□ -1.02
CASC4-206ENST00000558847 F12P00748 615 aaPredicted RBP8.66□□□□□ -1.02
CASC4-206ENST00000558847 HELBQ8NG08 1087 aaPredicted RBP8.66□□□□□ -1.02
CASC4-206ENST00000558847 WIPF1O43516 503 aa8.65□□□□□ -1.02
CASC4-206ENST00000558847 WDR4P57081 412 aaKnown RBP8.65□□□□□ -1.02
CASC4-206ENST00000558847 FOXJ1Q92949 421 aa8.65□□□□□ -1.02
CASC4-206ENST00000558847 ZFP42Q96MM3 310 aa8.65□□□□□ -1.02
CASC4-206ENST00000558847 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.02
CASC4-206ENST00000558847 ATP1B4Q9UN42 357 aaPredicted RBP8.65□□□□□ -1.02
CASC4-206ENST00000558847 ADH1CP00326 375 aa8.64□□□□□ -1.03
CASC4-206ENST00000558847 USP17L8P0C7I0 530 aa8.64□□□□□ -1.03
CASC4-206ENST00000558847 CTDSPL2Q05D32 466 aa8.64□□□□□ -1.03
CASC4-206ENST00000558847 SCARF1Q14162 830 aa8.64□□□□□ -1.03
CASC4-206ENST00000558847 STK17AQ9UEE5 414 aa8.64□□□□□ -1.03
CASC4-206ENST00000558847 VEGFBP49765 207 aa8.63□□□□□ -1.03
CASC4-206ENST00000558847 MPNDQ8N594 471 aa8.63□□□□□ -1.03
CASC4-206ENST00000558847 AP1G2O75843 785 aa8.62□□□□□ -1.03
CASC4-206ENST00000558847 FLIIQ13045 1269 aa8.62□□□□□ -1.03
CASC4-206ENST00000558847 MRPL14Q6P1L8 145 aaKnown RBP8.62□□□□□ -1.03
CASC4-206ENST00000558847 LRRN4Q8WUT4 740 aa8.62□□□□□ -1.03
CASC4-206ENST00000558847 PURBQ96QR8 312 aaKnown RBP8.62□□□□□ -1.03
CASC4-206ENST00000558847 ARXQ96QS3 562 aa8.62□□□□□ -1.03
CASC4-206ENST00000558847 TIMP2P16035 220 aa8.61□□□□□ -1.03
CASC4-206ENST00000558847 TMEM259Q4ZIN3 620 aa8.61□□□□□ -1.03
CASC4-206ENST00000558847 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
CASC4-206ENST00000558847 BPHLQ86WA6 291 aaPredicted RBP8.61□□□□□ -1.03
CASC4-206ENST00000558847 HMX1Q9NP08 348 aaPredicted RBP8.61□□□□□ -1.03
CASC4-206ENST00000558847 IRF7Q92985 503 aa8.6□□□□□ -1.03
CASC4-206ENST00000558847 ZIC2O95409 532 aaPredicted RBP8.59□□□□□ -1.03
CASC4-206ENST00000558847 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
CASC4-206ENST00000558847 SOCS7O14512 581 aa8.58□□□□□ -1.04
CASC4-206ENST00000558847 NR5A1Q13285 461 aa8.58□□□□□ -1.04
CASC4-206ENST00000558847 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
CASC4-206ENST00000558847 CDK15Q96Q40 435 aa8.58□□□□□ -1.04
CASC4-206ENST00000558847 GMPRP36959 345 aa8.57□□□□□ -1.04
CASC4-206ENST00000558847 C6orf118Q5T5N4 469 aa8.57□□□□□ -1.04
CASC4-206ENST00000558847 NPAS3Q8IXF0 933 aa8.57□□□□□ -1.04
CASC4-206ENST00000558847 MTMR14Q8NCE2 650 aa8.57□□□□□ -1.04
CASC4-206ENST00000558847 TRIM34Q9BYJ4 488 aa8.57□□□□□ -1.04
CASC4-206ENST00000558847 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
CASC4-206ENST00000558847 ZFAND3Q9H8U3 227 aa8.57□□□□□ -1.04
CASC4-206ENST00000558847 MAGEB6P1A0A0J9YX57 407 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms