RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 CABLES1Q8TDN4 633 aa15.63■□□□□ 0.09
PBX1-213ENST00000558796 NGLY1Q96IV0 654 aa15.63■□□□□ 0.09
PBX1-213ENST00000558796 SBNO2Q9Y2G9 1366 aa15.62■□□□□ 0.09
PBX1-213ENST00000558796 NRKQ7Z2Y5 1582 aa15.62■□□□□ 0.09
PBX1-213ENST00000558796 HAP1P54257 671 aaPredicted RBP15.62■□□□□ 0.09
PBX1-213ENST00000558796 NRAPQ86VF7 1730 aa15.61■□□□□ 0.09
PBX1-213ENST00000558796 PLEKHG3A1L390 1219 aa15.61■□□□□ 0.09
PBX1-213ENST00000558796 PIK3C2AO00443 1686 aa15.6■□□□□ 0.09
PBX1-213ENST00000558796 COL14A1Q05707 1796 aaKnown RBP15.6■□□□□ 0.09
PBX1-213ENST00000558796 CABP1Q9NZU7 370 aa15.58■□□□□ 0.08
PBX1-213ENST00000558796 USP21Q9UK80 565 aa15.58■□□□□ 0.08
PBX1-213ENST00000558796 ATAD2Q6PL18 1390 aa15.58■□□□□ 0.08
PBX1-213ENST00000558796 USP47Q96K76 1375 aa15.58■□□□□ 0.08
PBX1-213ENST00000558796 USP6P35125 1406 aa15.58■□□□□ 0.08
PBX1-213ENST00000558796 BCL9LQ86UU0 1499 aa15.58■□□□□ 0.08
PBX1-213ENST00000558796 SLIT2O94813 1529 aa15.58■□□□□ 0.08
PBX1-213ENST00000558796 NUTM2GQ5VZR2 741 aa15.57■□□□□ 0.08
PBX1-213ENST00000558796 ATRNO75882 1429 aa15.57■□□□□ 0.08
PBX1-213ENST00000558796 RXRBP28702 533 aa15.56■□□□□ 0.08
PBX1-213ENST00000558796 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
PBX1-213ENST00000558796 QTRT2Q9H974 415 aaKnown RBP15.56■□□□□ 0.08
PBX1-213ENST00000558796 TIMELESSQ9UNS1 1208 aa15.56■□□□□ 0.08
PBX1-213ENST00000558796 RGS12O14924 1447 aa15.56■□□□□ 0.08
PBX1-213ENST00000558796 CDK12Q9NYV4 1490 aaPredicted RBP15.55■□□□□ 0.08
PBX1-213ENST00000558796 ST20-MTHFSA0A0A6YYL1 179 aa15.55■□□□□ 0.08
PBX1-213ENST00000558796 BRWD3Q6RI45 1802 aa15.54■□□□□ 0.08
PBX1-213ENST00000558796 GLI3P10071 1580 aa15.54■□□□□ 0.08
PBX1-213ENST00000558796 TESK2Q96S53 571 aa15.53■□□□□ 0.08
PBX1-213ENST00000558796 TRPC5Q9UL62 973 aaPredicted RBP15.53■□□□□ 0.08
PBX1-213ENST00000558796 CD163L1Q9NR16 1453 aa15.52■□□□□ 0.08
PBX1-213ENST00000558796 MYOM1P52179 1685 aa15.52■□□□□ 0.08
PBX1-213ENST00000558796 RBM6P78332 1123 aaKnown RBP15.52■□□□□ 0.08
PBX1-213ENST00000558796 ABTB2Q8N961 1025 aa15.52■□□□□ 0.08
PBX1-213ENST00000558796 CPSF1Q10570 1443 aaKnown RBP15.51■□□□□ 0.07
PBX1-213ENST00000558796 SSH2Q76I76 1423 aa15.51■□□□□ 0.07
PBX1-213ENST00000558796 BRD4O60885 1362 aaPredicted RBP15.51■□□□□ 0.07
PBX1-213ENST00000558796 USP54Q70EL1 1684 aa15.51■□□□□ 0.07
PBX1-213ENST00000558796 RGPD5Q99666 1765 aa15.51■□□□□ 0.07
PBX1-213ENST00000558796 LMO7Q8WWI1 1683 aa15.51■□□□□ 0.07
PBX1-213ENST00000558796 KTN1Q86UP2 1357 aaKnown RBP15.5■□□□□ 0.07
PBX1-213ENST00000558796 USP19O94966 1318 aa15.5■□□□□ 0.07
PBX1-213ENST00000558796 SLIT3O75094 1523 aa15.5■□□□□ 0.07
PBX1-213ENST00000558796 FAM83GA6ND36 823 aa15.5■□□□□ 0.07
PBX1-213ENST00000558796 UNC5CLQ8IV45 518 aa15.5■□□□□ 0.07
PBX1-213ENST00000558796 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
PBX1-213ENST00000558796 TMC1Q8TDI8 760 aa15.49■□□□□ 0.07
PBX1-213ENST00000558796 EP400Q96L91 3159 aa15.49■□□□□ 0.07
PBX1-213ENST00000558796 LTN1O94822 1766 aa15.49■□□□□ 0.07
PBX1-213ENST00000558796 PRDM11Q9NQV5 511 aa15.48■□□□□ 0.07
PBX1-213ENST00000558796 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
PBX1-213ENST00000558796 TTC21BQ7Z4L5 1316 aa15.47■□□□□ 0.07
PBX1-213ENST00000558796 ZC3H6P61129 1189 aaKnown RBP15.47■□□□□ 0.07
PBX1-213ENST00000558796 CHRNA2Q15822 529 aa15.47■□□□□ 0.07
PBX1-213ENST00000558796 BTG4Q9NY30 223 aa15.47■□□□□ 0.07
PBX1-213ENST00000558796 A0A1W2PP64 1363 aa15.47■□□□□ 0.07
PBX1-213ENST00000558796 NLRP13Q86W25 1043 aa15.46■□□□□ 0.07
PBX1-213ENST00000558796 GJD4Q96KN9 370 aaPredicted RBP15.46■□□□□ 0.07
PBX1-213ENST00000558796 ZNF692Q9BU19 519 aaPredicted RBP15.46■□□□□ 0.07
PBX1-213ENST00000558796 SLC12A5Q9H2X9 1139 aa15.46■□□□□ 0.07
PBX1-213ENST00000558796 COL18A1P39060 1754 aa15.46■□□□□ 0.07
PBX1-213ENST00000558796 NLRP6P59044 892 aa15.45■□□□□ 0.06
PBX1-213ENST00000558796 TMF1P82094 1093 aa15.45■□□□□ 0.06
PBX1-213ENST00000558796 CCDC9Q9Y3X0 531 aaKnown RBP15.45■□□□□ 0.06
PBX1-213ENST00000558796 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
PBX1-213ENST00000558796 NFAT5O94916 1531 aa15.44■□□□□ 0.06
PBX1-213ENST00000558796 HDGFL2Q7Z4V5 671 aaPredicted RBP15.44■□□□□ 0.06
PBX1-213ENST00000558796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.44■□□□□ 0.06
PBX1-213ENST00000558796 NINLQ9Y2I6 1382 aa15.44■□□□□ 0.06
PBX1-213ENST00000558796 CAMTA1Q9Y6Y1 1673 aa15.44■□□□□ 0.06
PBX1-213ENST00000558796 EDC4Q6P2E9 1401 aaKnown RBP15.43■□□□□ 0.06
PBX1-213ENST00000558796 WNK3Q9BYP7 1800 aa15.43■□□□□ 0.06
PBX1-213ENST00000558796 GCP02774 474 aa15.43■□□□□ 0.06
PBX1-213ENST00000558796 VPS72Q15906 364 aa15.43■□□□□ 0.06
PBX1-213ENST00000558796 PUS7Q96PZ0 661 aaKnown RBP15.43■□□□□ 0.06
PBX1-213ENST00000558796 CPDO75976 1380 aa15.43■□□□□ 0.06
PBX1-213ENST00000558796 THSD7AQ9UPZ6 1657 aa15.42■□□□□ 0.06
PBX1-213ENST00000558796 ZBTB7CA1YPR0 619 aa15.42■□□□□ 0.06
PBX1-213ENST00000558796 TERF2IPQ9NYB0 399 aa15.42■□□□□ 0.06
PBX1-213ENST00000558796 SOX12O15370 315 aa15.41■□□□□ 0.06
PBX1-213ENST00000558796 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
PBX1-213ENST00000558796 NME9Q86XW9 330 aa15.41■□□□□ 0.06
PBX1-213ENST00000558796 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
PBX1-213ENST00000558796 STRN4Q9NRL3 753 aa15.4■□□□□ 0.06
PBX1-213ENST00000558796 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
PBX1-213ENST00000558796 ANKRD36BQ8N2N9 1353 aa15.39■□□□□ 0.05
PBX1-213ENST00000558796 OVOS2A0A0J9YW53 1432 aa15.38■□□□□ 0.05
PBX1-213ENST00000558796 OVOS2Q6IE36 1432 aa15.38■□□□□ 0.05
PBX1-213ENST00000558796 HSPA5P11021 654 aaKnown RBP15.38■□□□□ 0.05
PBX1-213ENST00000558796 SPATA31A5Q5VU36 1347 aa15.38■□□□□ 0.05
PBX1-213ENST00000558796 SPATA31A7Q8IWB4 1347 aa15.38■□□□□ 0.05
PBX1-213ENST00000558796 USP31Q70CQ4 1352 aa15.37■□□□□ 0.05
PBX1-213ENST00000558796 A0A0G2JS52 829 aa15.37■□□□□ 0.05
PBX1-213ENST00000558796 EIF4G2P78344 907 aaKnown RBP eCLIP15.37■□□□□ 0.05
PBX1-213ENST00000558796 MYT1Q01538 1121 aa15.37■□□□□ 0.05
PBX1-213ENST00000558796 FAM98CQ17RN3 349 aaKnown RBP15.37■□□□□ 0.05
PBX1-213ENST00000558796 CDCA8Q53HL2 280 aa15.37■□□□□ 0.05
PBX1-213ENST00000558796 SEPT12Q8IYM1 358 aa15.36■□□□□ 0.05
PBX1-213ENST00000558796 UPF1Q92900 1129 aaKnown RBP eCLIP15.36■□□□□ 0.05
PBX1-213ENST00000558796 ABCC6O95255 1503 aa15.36■□□□□ 0.05
PBX1-213ENST00000558796 AATKQ6ZMQ8 1374 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms