RNA–Protein interactions for RNA: ENST00000558560.1

RMDN3-206, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-206ENST00000558560 CCDC9Q9Y3X0 531 aaKnown RBP27.03■■□□□ 1.92
RMDN3-206ENST00000558560 NUDT16Q96DE0 195 aaKnown RBP27.02■■□□□ 1.92
RMDN3-206ENST00000558560 KRT27Q7Z3Y8 459 aa27■■□□□ 1.91
RMDN3-206ENST00000558560 BTG4Q9NY30 223 aa27■■□□□ 1.91
RMDN3-206ENST00000558560 PLEKHG5O94827 1062 aa26.98■■□□□ 1.91
RMDN3-206ENST00000558560 SF3B2Q13435 895 aaKnown RBP26.98■■□□□ 1.91
RMDN3-206ENST00000558560 TOPAZ1Q8N9V7 1692 aa26.98■■□□□ 1.91
RMDN3-206ENST00000558560 POLR3AO14802 1390 aaPredicted RBP26.97■■□□□ 1.91
RMDN3-206ENST00000558560 CDK19Q9BWU1 502 aa26.97■■□□□ 1.91
RMDN3-206ENST00000558560 CCDC61Q9Y6R9 512 aa26.97■■□□□ 1.91
RMDN3-206ENST00000558560 PAK3O75914 559 aaPredicted RBP26.96■■□□□ 1.91
RMDN3-206ENST00000558560 PLEKHG3A1L390 1219 aa26.94■■□□□ 1.9
RMDN3-206ENST00000558560 SPATA31A5Q5VU36 1347 aa26.93■■□□□ 1.9
RMDN3-206ENST00000558560 SPATA31A7Q8IWB4 1347 aa26.93■■□□□ 1.9
RMDN3-206ENST00000558560 SRCAPQ6ZRS2 3230 aa26.93■■□□□ 1.9
RMDN3-206ENST00000558560 PRDM11Q9NQV5 511 aa26.92■■□□□ 1.9
RMDN3-206ENST00000558560 PHRF1Q9P1Y6 1649 aaKnown RBP26.91■■□□□ 1.9
RMDN3-206ENST00000558560 FAM98CQ17RN3 349 aaKnown RBP26.9■■□□□ 1.9
RMDN3-206ENST00000558560 NBPF8Q3BBV2 869 aa26.9■■□□□ 1.9
RMDN3-206ENST00000558560 ACEP12821 1306 aa26.9■■□□□ 1.9
RMDN3-206ENST00000558560 BRD4O60885 1362 aaPredicted RBP26.89■■□□□ 1.9
RMDN3-206ENST00000558560 THSD7AQ9UPZ6 1657 aa26.88■■□□□ 1.89
RMDN3-206ENST00000558560 A0A0G2JS52 829 aa26.87■■□□□ 1.89
RMDN3-206ENST00000558560 MYT1Q01538 1121 aa26.87■■□□□ 1.89
RMDN3-206ENST00000558560 KIAA0232Q92628 1395 aa26.86■■□□□ 1.89
RMDN3-206ENST00000558560 NBPF1Q3BBV0 1214 aa26.86■■□□□ 1.89
RMDN3-206ENST00000558560 DEFB132Q7Z7B7 95 aa26.86■■□□□ 1.89
RMDN3-206ENST00000558560 RGPD1P0DJD0 1748 aa26.85■■□□□ 1.89
RMDN3-206ENST00000558560 CENPJQ9HC77 1338 aaPredicted RBP26.85■■□□□ 1.89
RMDN3-206ENST00000558560 BAG6P46379 1132 aa26.84■■□□□ 1.89
RMDN3-206ENST00000558560 SPATA31A1Q5TZJ5 1347 aa26.83■■□□□ 1.89
RMDN3-206ENST00000558560 CPDO75976 1380 aa26.82■■□□□ 1.88
RMDN3-206ENST00000558560 ABTB2Q8N961 1025 aa26.8■■□□□ 1.88
RMDN3-206ENST00000558560 USP19O94966 1318 aa26.8■■□□□ 1.88
RMDN3-206ENST00000558560 QRICH2Q9H0J4 1663 aa26.79■■□□□ 1.88
RMDN3-206ENST00000558560 SRPK2P78362 688 aaKnown RBP26.79■■□□□ 1.88
RMDN3-206ENST00000558560 NLRP13Q86W25 1043 aa26.79■■□□□ 1.88
RMDN3-206ENST00000558560 DISP2A7MBM2 1401 aa26.79■■□□□ 1.88
RMDN3-206ENST00000558560 PPIP5K1Q6PFW1 1433 aa26.79■■□□□ 1.88
RMDN3-206ENST00000558560 NRKQ7Z2Y5 1582 aa26.79■■□□□ 1.88
RMDN3-206ENST00000558560 ZC3H6P61129 1189 aaKnown RBP26.78■■□□□ 1.88
RMDN3-206ENST00000558560 CHRNA2Q15822 529 aa26.77■■□□□ 1.88
RMDN3-206ENST00000558560 BARGINQ6ZT62 677 aa26.77■■□□□ 1.88
RMDN3-206ENST00000558560 LMO7Q8WWI1 1683 aa26.76■■□□□ 1.87
RMDN3-206ENST00000558560 SSH2Q76I76 1423 aa26.74■■□□□ 1.87
RMDN3-206ENST00000558560 EVA1CP58658 441 aa26.74■■□□□ 1.87
RMDN3-206ENST00000558560 NUTM2GQ5VZR2 741 aa26.74■■□□□ 1.87
RMDN3-206ENST00000558560 FAM196AQ6ZSG2 479 aa26.74■■□□□ 1.87
RMDN3-206ENST00000558560 L3MBTL2Q969R5 705 aa26.74■■□□□ 1.87
RMDN3-206ENST00000558560 STRN4Q9NRL3 753 aa26.74■■□□□ 1.87
RMDN3-206ENST00000558560 CAMTA1Q9Y6Y1 1673 aa26.73■■□□□ 1.87
RMDN3-206ENST00000558560 LRP5O75197 1615 aa26.73■■□□□ 1.87
RMDN3-206ENST00000558560 TNS1Q9HBL0 1735 aaKnown RBP26.73■■□□□ 1.87
RMDN3-206ENST00000558560 TRPM1Q7Z4N2 1603 aa26.72■■□□□ 1.87
RMDN3-206ENST00000558560 GCP02774 474 aa26.72■■□□□ 1.87
RMDN3-206ENST00000558560 CABP2Q9NPB3 220 aa26.72■■□□□ 1.87
RMDN3-206ENST00000558560 THRAP3Q9Y2W1 955 aaKnown RBP26.72■■□□□ 1.87
RMDN3-206ENST00000558560 EVC2Q86UK5 1308 aa26.7■■□□□ 1.87
RMDN3-206ENST00000558560 USP6P35125 1406 aa26.7■■□□□ 1.86
RMDN3-206ENST00000558560 TCP11L2Q8N4U5 519 aa26.68■■□□□ 1.86
RMDN3-206ENST00000558560 CABP1Q9NZU7 370 aa26.68■■□□□ 1.86
RMDN3-206ENST00000558560 C11orf95C9JLR9 678 aaPredicted RBP26.67■■□□□ 1.86
RMDN3-206ENST00000558560 PARD3Q8TEW0 1356 aa26.67■■□□□ 1.86
RMDN3-206ENST00000558560 EN1Q05925 392 aaPredicted RBP26.66■■□□□ 1.86
RMDN3-206ENST00000558560 FAM182BQ5T319 152 aa26.66■■□□□ 1.86
RMDN3-206ENST00000558560 SLIT3O75094 1523 aa26.65■■□□□ 1.86
RMDN3-206ENST00000558560 PDE3BQ13370 1112 aa26.65■■□□□ 1.86
RMDN3-206ENST00000558560 ZNF692Q9BU19 519 aaPredicted RBP26.65■■□□□ 1.86
RMDN3-206ENST00000558560 AATKQ6ZMQ8 1374 aa26.64■■□□□ 1.86
RMDN3-206ENST00000558560 LARP1Q6PKG0 1096 aaKnown RBP26.64■■□□□ 1.86
RMDN3-206ENST00000558560 COL5A2P05997 1499 aaPredicted RBP26.63■■□□□ 1.85
RMDN3-206ENST00000558560 PARP4Q9UKK3 1724 aaKnown RBP26.63■■□□□ 1.85
RMDN3-206ENST00000558560 NLRP6P59044 892 aa26.63■■□□□ 1.85
RMDN3-206ENST00000558560 ROCK2O75116 1388 aaKnown RBP26.62■■□□□ 1.85
RMDN3-206ENST00000558560 USP35Q9P2H5 1018 aa26.62■■□□□ 1.85
RMDN3-206ENST00000558560 CAMKK2Q96RR4 588 aa26.61■■□□□ 1.85
RMDN3-206ENST00000558560 CRB1P82279 1406 aa26.61■■□□□ 1.85
RMDN3-206ENST00000558560 AKAP12Q02952 1782 aa26.61■■□□□ 1.85
RMDN3-206ENST00000558560 TRIM37O94972 964 aa26.6■■□□□ 1.85
RMDN3-206ENST00000558560 SIN3AQ96ST3 1273 aa26.6■■□□□ 1.85
RMDN3-206ENST00000558560 PIK3C2AO00443 1686 aa26.6■■□□□ 1.85
RMDN3-206ENST00000558560 COL18A1P39060 1754 aa26.58■■□□□ 1.85
RMDN3-206ENST00000558560 PSDA5PKW4 1024 aaPredicted RBP26.57■■□□□ 1.84
RMDN3-206ENST00000558560 TTC21AQ8NDW8 1320 aa26.57■■□□□ 1.84
RMDN3-206ENST00000558560 SBNO2Q9Y2G9 1366 aa26.57■■□□□ 1.84
RMDN3-206ENST00000558560 APBA3O96018 575 aa26.56■■□□□ 1.84
RMDN3-206ENST00000558560 EZH2Q15910 746 aaKnown RBP26.56■■□□□ 1.84
RMDN3-206ENST00000558560 KCNH5Q8NCM2 988 aa26.56■■□□□ 1.84
RMDN3-206ENST00000558560 RREB1Q92766 1687 aa26.54■■□□□ 1.84
RMDN3-206ENST00000558560 NEUROD1Q13562 356 aa26.54■■□□□ 1.84
RMDN3-206ENST00000558560 CPSF1Q10570 1443 aaKnown RBP26.54■■□□□ 1.84
RMDN3-206ENST00000558560 TTC21BQ7Z4L5 1316 aa26.53■■□□□ 1.84
RMDN3-206ENST00000558560 R3HDM1Q15032 1099 aaKnown RBP26.51■■□□□ 1.83
RMDN3-206ENST00000558560 CDCA7Q9BWT1 371 aaPredicted RBP26.51■■□□□ 1.83
RMDN3-206ENST00000558560 WDR17Q8IZU2 1322 aa26.5■■□□□ 1.83
RMDN3-206ENST00000558560 ARHGEF25Q86VW2 580 aa26.5■■□□□ 1.83
RMDN3-206ENST00000558560 PEAK1Q9H792 1746 aa26.5■■□□□ 1.83
RMDN3-206ENST00000558560 ABCC6O95255 1503 aa26.49■■□□□ 1.83
RMDN3-206ENST00000558560 SBF2Q86WG5 1849 aa26.49■■□□□ 1.83
RMDN3-206ENST00000558560 RGPD3A6NKT7 1758 aaPredicted RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms