RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 BCL11AQ9H165 835 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 FRAS1Q86XX4 4008 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 TRAK2O60296 914 aa2.34□□□□□ -2.03
CTDSPL2-202ENST00000558373 SMCPP49901 116 aaPredicted RBP2.34□□□□□ -2.03
CTDSPL2-202ENST00000558373 OCLNQ16625 522 aa2.34□□□□□ -2.03
CTDSPL2-202ENST00000558373 HPS5Q9UPZ3 1129 aa2.34□□□□□ -2.03
CTDSPL2-202ENST00000558373 PRSS12P56730 875 aa2.34□□□□□ -2.03
CTDSPL2-202ENST00000558373 CCDC125Q86Z20 511 aa2.34□□□□□ -2.03
CTDSPL2-202ENST00000558373 AAASQ9NRG9 546 aa2.34□□□□□ -2.03
CTDSPL2-202ENST00000558373 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.34□□□□□ -2.03
CTDSPL2-202ENST00000558373 PROSER2Q86WR7 435 aaPredicted RBP2.34□□□□□ -2.04
CTDSPL2-202ENST00000558373 MPNDQ8N594 471 aa2.34□□□□□ -2.04
CTDSPL2-202ENST00000558373 ALMS1Q8TCU4 4167 aa2.34□□□□□ -2.04
CTDSPL2-202ENST00000558373 DNAJB2P25686 324 aa2.34□□□□□ -2.04
CTDSPL2-202ENST00000558373 NKX2-3Q8TAU0 364 aa2.34□□□□□ -2.04
CTDSPL2-202ENST00000558373 ZNF516Q92618 1163 aa2.34□□□□□ -2.04
CTDSPL2-202ENST00000558373 DDX12PQ92771 950 aa2.34□□□□□ -2.04
CTDSPL2-202ENST00000558373 PKD2L1Q9P0L9 805 aa2.34□□□□□ -2.04
CTDSPL2-202ENST00000558373 CCDC9Q9Y3X0 531 aaKnown RBP2.34□□□□□ -2.04
CTDSPL2-202ENST00000558373 PKHD1L1Q86WI1 4243 aa2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 GRNP28799 593 aaKnown RBP2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 CLK2P49760 499 aaKnown RBP2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 C1orf216Q8TAB5 229 aa2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 PDZRN3Q9UPQ7 1066 aa2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 GSK3AP49840 483 aa2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 POM121Q96HA1 1249 aa2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 ZMIZ1Q9ULJ6 1067 aa2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 SALL2Q9Y467 1007 aaPredicted RBP2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 FAM26DQ5JW98 314 aa2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 GPBP1L1Q9HC44 474 aaPredicted RBP2.33□□□□□ -2.04
CTDSPL2-202ENST00000558373 GOLGA8CPA6NN73 597 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 Q3C1V9 767 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 DESI1Q6ICB0 168 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 RIC3Q7Z5B4 369 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 BEGAINQ9BUH8 593 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 CFHR5Q9BXR6 569 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 SEPT9Q9UHD8 586 aaPredicted RBP2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 SUPT5HO00267 1087 aaKnown RBP2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 SLC10A3P09131 477 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 ITGAEP38570 1179 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 MDM2Q00987 491 aaPredicted RBP2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 TSR1Q2NL82 804 aaKnown RBP2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 KMT5BQ4FZB7 885 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 SPRYD7Q5W111 196 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 LIAT1Q6ZQX7 453 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 ZNF598Q86UK7 904 aaKnown RBP2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 LRCH3Q96II8 777 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 ESPNB1AK53 854 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 LZTS3O60299 673 aaPredicted RBP2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 SLF2Q8IX21 1173 aa2.32□□□□□ -2.04
CTDSPL2-202ENST00000558373 PLA2G2CQ5R387 149 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 SAMD7Q7Z3H4 446 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 C1QTNF2Q9BXJ5 285 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 ZBTB3Q9H5J0 574 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 NDUFB9Q9Y6M9 179 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 KCNA1Q09470 495 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 STK17AQ9UEE5 414 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 COG6Q9Y2V7 657 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 VPS13BQ7Z7G8 4022 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 ZC3H4Q9UPT8 1303 aaKnown RBP2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 MYSM1Q5VVJ2 828 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 ARMC2Q8NEN0 867 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 ANKRD24Q8TF21 1146 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 RBM33Q96EV2 1170 aaKnown RBP2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 TOR4AQ9NXH8 423 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 HELBQ8NG08 1087 aaPredicted RBP2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 TBC1D2Q9BYX2 928 aa2.31□□□□□ -2.04
CTDSPL2-202ENST00000558373 NUTM2BA6NNL0 878 aaPredicted RBP2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 NUTM2EB1AL46 878 aaPredicted RBP2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 RNF223E7ERA6 249 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 NUTM2DQ5VT03 806 aaPredicted RBP2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 PADI6Q6TGC4 694 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 NUTM2AQ8IVF1 878 aaPredicted RBP2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 TATDN2Q93075 761 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 USTQ9Y2C2 406 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 ZPR1O75312 459 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 CSB-PGBD3P0DP91 1061 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 FOXK2Q01167 660 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 ANKLE1Q8NAG6 615 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 CDCA7LQ96GN5 454 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 LYSTQ99698 3801 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 MTMR7Q9Y216 660 aa2.3□□□□□ -2.04
CTDSPL2-202ENST00000558373 RFC5P40937 340 aa2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 PPP4CP60510 307 aa2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 KCNQ5Q9NR82 932 aa2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 DACH1Q9UI36 760 aa2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 WASLO00401 505 aaPredicted RBP2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 MMP16P51512 607 aa2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 GPKOWQ92917 476 aaPredicted RBP eCLIP2.29□□□□□ -2.042e-7■□□□□ 10.9
CTDSPL2-202ENST00000558373 LIMD1Q9UGP4 676 aa2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 EIF4G2P78344 907 aaKnown RBP eCLIP2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 RDH13Q8NBN7 331 aa2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 KIAA1522Q9P206 1035 aaPredicted RBP2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 PNMA3Q9UL41 463 aa2.29□□□□□ -2.04
CTDSPL2-202ENST00000558373 RSBN1LQ6PCB5 846 aaPredicted RBP2.28□□□□□ -2.04
CTDSPL2-202ENST00000558373 SPIRE2Q8WWL2 714 aa2.28□□□□□ -2.04
CTDSPL2-202ENST00000558373 RCCD1A6NED2 376 aa2.28□□□□□ -2.04
CTDSPL2-202ENST00000558373 KDM4AO75164 1064 aa2.28□□□□□ -2.04
CTDSPL2-202ENST00000558373 ERCC3P19447 782 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms