RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ROCK2O75116 1388 aaKnown RBP14.57□□□□□ -0.08
TPM1-212ENST00000558347 HAP1P54257 671 aaPredicted RBP14.57□□□□□ -0.08
TPM1-212ENST00000558347 CRYBG1Q9Y4K1 1723 aa14.57□□□□□ -0.08
TPM1-212ENST00000558347 PLCH1Q4KWH8 1693 aa14.57□□□□□ -0.08
TPM1-212ENST00000558347 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
TPM1-212ENST00000558347 POLR3AO14802 1390 aaPredicted RBP14.56□□□□□ -0.08
TPM1-212ENST00000558347 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
TPM1-212ENST00000558347 UPF1Q92900 1129 aaKnown RBP eCLIP14.56□□□□□ -0.08
TPM1-212ENST00000558347 ACEP12821 1306 aa14.55□□□□□ -0.08
TPM1-212ENST00000558347 PLEKHG3A1L390 1219 aa14.55□□□□□ -0.08
TPM1-212ENST00000558347 SRPK2P78362 688 aaKnown RBP14.55□□□□□ -0.08
TPM1-212ENST00000558347 UNC5CLQ8IV45 518 aa14.55□□□□□ -0.08
TPM1-212ENST00000558347 CABP2Q9NPB3 220 aa14.55□□□□□ -0.08
TPM1-212ENST00000558347 NWD2Q9ULI1 1742 aa14.54□□□□□ -0.08
TPM1-212ENST00000558347 GLI3P10071 1580 aa14.54□□□□□ -0.08
TPM1-212ENST00000558347 TONSLQ96HA7 1378 aa14.54□□□□□ -0.08
TPM1-212ENST00000558347 PPIP5K1Q6PFW1 1433 aa14.53□□□□□ -0.08
TPM1-212ENST00000558347 GJD4Q96KN9 370 aaPredicted RBP14.53□□□□□ -0.08
TPM1-212ENST00000558347 RALGAPBQ86X10 1494 aa14.53□□□□□ -0.08
TPM1-212ENST00000558347 FAM83GA6ND36 823 aa14.52□□□□□ -0.08
TPM1-212ENST00000558347 PHRF1Q9P1Y6 1649 aaKnown RBP14.52□□□□□ -0.09
TPM1-212ENST00000558347 PELP1Q8IZL8 1130 aaKnown RBP14.51□□□□□ -0.09
TPM1-212ENST00000558347 NRAPQ86VF7 1730 aa14.51□□□□□ -0.09
TPM1-212ENST00000558347 EP400Q96L91 3159 aa14.5□□□□□ -0.09
TPM1-212ENST00000558347 COL14A1Q05707 1796 aaKnown RBP14.5□□□□□ -0.09
TPM1-212ENST00000558347 NUTM2GQ5VZR2 741 aa14.5□□□□□ -0.09
TPM1-212ENST00000558347 EVC2Q86UK5 1308 aa14.49□□□□□ -0.09
TPM1-212ENST00000558347 CABP1Q9NZU7 370 aa14.49□□□□□ -0.09
TPM1-212ENST00000558347 VPS72Q15906 364 aa14.48□□□□□ -0.09
TPM1-212ENST00000558347 CARD11Q9BXL7 1154 aa14.48□□□□□ -0.09
TPM1-212ENST00000558347 BTG4Q9NY30 223 aa14.48□□□□□ -0.09
TPM1-212ENST00000558347 ABTB2Q8N961 1025 aa14.46□□□□□ -0.09
TPM1-212ENST00000558347 NRKQ7Z2Y5 1582 aa14.46□□□□□ -0.09
TPM1-212ENST00000558347 USP6P35125 1406 aa14.46□□□□□ -0.09
TPM1-212ENST00000558347 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.09
TPM1-212ENST00000558347 KIAA0232Q92628 1395 aa14.46□□□□□ -0.09
TPM1-212ENST00000558347 BRWD3Q6RI45 1802 aa14.46□□□□□ -0.1
TPM1-212ENST00000558347 SBNO2Q9Y2G9 1366 aa14.45□□□□□ -0.1
TPM1-212ENST00000558347 PRDM11Q9NQV5 511 aa14.45□□□□□ -0.1
TPM1-212ENST00000558347 CCDC9Q9Y3X0 531 aaKnown RBP14.45□□□□□ -0.1
TPM1-212ENST00000558347 USP19O94966 1318 aa14.44□□□□□ -0.1
TPM1-212ENST00000558347 ZC3H6P61129 1189 aaKnown RBP14.44□□□□□ -0.1
TPM1-212ENST00000558347 CHRNA2Q15822 529 aa14.44□□□□□ -0.1
TPM1-212ENST00000558347 SSH2Q76I76 1423 aa14.44□□□□□ -0.1
TPM1-212ENST00000558347 AKAP12Q02952 1782 aa14.44□□□□□ -0.1
TPM1-212ENST00000558347 BRD4O60885 1362 aaPredicted RBP14.44□□□□□ -0.1
TPM1-212ENST00000558347 PIK3C2AO00443 1686 aa14.43□□□□□ -0.1
TPM1-212ENST00000558347 ONECUT3O60422 494 aaPredicted RBP14.42□□□□□ -0.1
TPM1-212ENST00000558347 SEPT12Q8IYM1 358 aa14.42□□□□□ -0.1
TPM1-212ENST00000558347 NLRP13Q86W25 1043 aa14.41□□□□□ -0.1
TPM1-212ENST00000558347 LMO7Q8WWI1 1683 aa14.4□□□□□ -0.1
TPM1-212ENST00000558347 SPATA31A5Q5VU36 1347 aa14.4□□□□□ -0.1
TPM1-212ENST00000558347 SPATA31A7Q8IWB4 1347 aa14.4□□□□□ -0.1
TPM1-212ENST00000558347 CPSF1Q10570 1443 aaKnown RBP14.4□□□□□ -0.1
TPM1-212ENST00000558347 SLIT3O75094 1523 aa14.4□□□□□ -0.1
TPM1-212ENST00000558347 GCP02774 474 aa14.4□□□□□ -0.1
TPM1-212ENST00000558347 FAM98CQ17RN3 349 aaKnown RBP14.4□□□□□ -0.1
TPM1-212ENST00000558347 CPDO75976 1380 aa14.4□□□□□ -0.1
TPM1-212ENST00000558347 CAMTA1Q9Y6Y1 1673 aa14.39□□□□□ -0.11
TPM1-212ENST00000558347 NLRP6P59044 892 aa14.39□□□□□ -0.11
TPM1-212ENST00000558347 MON2Q7Z3U7 1717 aa14.39□□□□□ -0.11
TPM1-212ENST00000558347 TTC21BQ7Z4L5 1316 aa14.38□□□□□ -0.11
TPM1-212ENST00000558347 CD163L1Q9NR16 1453 aa14.38□□□□□ -0.11
TPM1-212ENST00000558347 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
TPM1-212ENST00000558347 STRN4Q9NRL3 753 aa14.38□□□□□ -0.11
TPM1-212ENST00000558347 THSD7AQ9UPZ6 1657 aa14.38□□□□□ -0.11
TPM1-212ENST00000558347 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
TPM1-212ENST00000558347 A0A0G2JS52 829 aa14.37□□□□□ -0.11
TPM1-212ENST00000558347 MYT1Q01538 1121 aa14.37□□□□□ -0.11
TPM1-212ENST00000558347 KRT27Q7Z3Y8 459 aa14.37□□□□□ -0.11
TPM1-212ENST00000558347 KTN1Q86UP2 1357 aaKnown RBP14.37□□□□□ -0.11
TPM1-212ENST00000558347 TESK2Q96S53 571 aa14.36□□□□□ -0.11
TPM1-212ENST00000558347 SPATA31A1Q5TZJ5 1347 aa14.36□□□□□ -0.11
TPM1-212ENST00000558347 MIER1Q8N108 512 aa14.36□□□□□ -0.11
TPM1-212ENST00000558347 TTC21AQ8NDW8 1320 aa14.35□□□□□ -0.11
TPM1-212ENST00000558347 ZBTB7CA1YPR0 619 aa14.34□□□□□ -0.11
TPM1-212ENST00000558347 CCDC125Q86Z20 511 aa14.34□□□□□ -0.11
TPM1-212ENST00000558347 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
TPM1-212ENST00000558347 SLC12A5Q9H2X9 1139 aa14.34□□□□□ -0.11
TPM1-212ENST00000558347 COL5A2P05997 1499 aaPredicted RBP14.34□□□□□ -0.11
TPM1-212ENST00000558347 COL18A1P39060 1754 aa14.34□□□□□ -0.11
TPM1-212ENST00000558347 BLMP54132 1417 aaPredicted RBP14.33□□□□□ -0.11
TPM1-212ENST00000558347 EVA1CP58658 441 aa14.33□□□□□ -0.12
TPM1-212ENST00000558347 LARP1Q6PKG0 1096 aaKnown RBP14.33□□□□□ -0.12
TPM1-212ENST00000558347 USP35Q9P2H5 1018 aa14.33□□□□□ -0.12
TPM1-212ENST00000558347 PUS7Q96PZ0 661 aaKnown RBP14.32□□□□□ -0.12
TPM1-212ENST00000558347 ZRANB1Q9UGI0 708 aa14.32□□□□□ -0.12
TPM1-212ENST00000558347 GTF3C3Q9Y5Q9 886 aa14.32□□□□□ -0.12
TPM1-212ENST00000558347 A0A1W2PP64 1363 aa14.32□□□□□ -0.12
TPM1-212ENST00000558347 AATKQ6ZMQ8 1374 aa14.32□□□□□ -0.12
TPM1-212ENST00000558347 USP47Q96K76 1375 aa14.32□□□□□ -0.12
TPM1-212ENST00000558347 NFAT5O94916 1531 aa14.32□□□□□ -0.12
TPM1-212ENST00000558347 FAM182BQ5T319 152 aa14.31□□□□□ -0.12
TPM1-212ENST00000558347 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.31□□□□□ -0.12
TPM1-212ENST00000558347 USP54Q70EL1 1684 aa14.31□□□□□ -0.12
TPM1-212ENST00000558347 SOX12O15370 315 aa14.31□□□□□ -0.12
TPM1-212ENST00000558347 HDGFL2Q7Z4V5 671 aaPredicted RBP14.31□□□□□ -0.12
TPM1-212ENST00000558347 RGPD5Q99666 1765 aa14.3□□□□□ -0.12
TPM1-212ENST00000558347 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
TPM1-212ENST00000558347 ARHGEF25Q86VW2 580 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms