RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 TNKS1BP1Q9C0C2 1729 aaKnown RBP16■□□□□ 0.15
RORA-207ENST00000558234 TNS3Q68CZ2 1445 aa16■□□□□ 0.15
RORA-207ENST00000558234 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
RORA-207ENST00000558234 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
RORA-207ENST00000558234 PLCH1Q4KWH8 1693 aa15.99■□□□□ 0.15
RORA-207ENST00000558234 ATF3P18847 181 aa15.99■□□□□ 0.15
RORA-207ENST00000558234 SMG6Q86US8 1419 aaKnown RBP15.97■□□□□ 0.15
RORA-207ENST00000558234 ACEP12821 1306 aa15.97■□□□□ 0.15
RORA-207ENST00000558234 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
RORA-207ENST00000558234 WNK3Q9BYP7 1800 aa15.97■□□□□ 0.15
RORA-207ENST00000558234 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
RORA-207ENST00000558234 PHF8Q9UPP1 1060 aa15.97■□□□□ 0.15
RORA-207ENST00000558234 CABP1Q9NZU7 370 aa15.96■□□□□ 0.15
RORA-207ENST00000558234 USP19O94966 1318 aa15.96■□□□□ 0.15
RORA-207ENST00000558234 RGPD1P0DJD0 1748 aa15.96■□□□□ 0.15
RORA-207ENST00000558234 SLC12A5Q9H2X9 1139 aa15.95■□□□□ 0.14
RORA-207ENST00000558234 RGPD5Q99666 1765 aa15.95■□□□□ 0.14
RORA-207ENST00000558234 MAP2P11137 1827 aaKnown RBP15.95■□□□□ 0.14
RORA-207ENST00000558234 TOM1O60784 492 aa15.94■□□□□ 0.14
RORA-207ENST00000558234 PNPLA6Q8IY17 1366 aa15.94■□□□□ 0.14
RORA-207ENST00000558234 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
RORA-207ENST00000558234 SPATA31A3Q5VYP0 1347 aa15.93■□□□□ 0.14
RORA-207ENST00000558234 COL14A1Q05707 1796 aaKnown RBP15.93■□□□□ 0.14
RORA-207ENST00000558234 LRP6O75581 1613 aa15.93■□□□□ 0.14
RORA-207ENST00000558234 NSD3Q9BZ95 1437 aa15.92■□□□□ 0.14
RORA-207ENST00000558234 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
RORA-207ENST00000558234 NPHP3Q7Z494 1330 aa15.91■□□□□ 0.14
RORA-207ENST00000558234 NSD2O96028 1365 aa15.91■□□□□ 0.14
RORA-207ENST00000558234 KTN1Q86UP2 1357 aaKnown RBP15.91■□□□□ 0.14
RORA-207ENST00000558234 AMER1Q5JTC6 1135 aaPredicted RBP15.91■□□□□ 0.14
RORA-207ENST00000558234 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
RORA-207ENST00000558234 TTC21AQ8NDW8 1320 aa15.91■□□□□ 0.14
RORA-207ENST00000558234 CCER2I3L3R5 266 aa15.9■□□□□ 0.14
RORA-207ENST00000558234 FBXO41Q8TF61 875 aa15.9■□□□□ 0.14
RORA-207ENST00000558234 ESCO1Q5FWF5 840 aa15.9■□□□□ 0.14
RORA-207ENST00000558234 TTC21BQ7Z4L5 1316 aa15.89■□□□□ 0.13
RORA-207ENST00000558234 UBAP1LF5GYI3 381 aa15.89■□□□□ 0.13
RORA-207ENST00000558234 DDX17Q92841 729 aaKnown RBP15.88■□□□□ 0.13
RORA-207ENST00000558234 COL3A1P02461 1466 aaPredicted RBP15.88■□□□□ 0.13
RORA-207ENST00000558234 C14orf37Q86TY3 774 aa15.88■□□□□ 0.13
RORA-207ENST00000558234 PARD3Q8TEW0 1356 aa15.87■□□□□ 0.13
RORA-207ENST00000558234 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
RORA-207ENST00000558234 ARHGEF10O15013 1369 aa15.87■□□□□ 0.13
RORA-207ENST00000558234 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
RORA-207ENST00000558234 NUTM2FA1L443 756 aa15.86■□□□□ 0.13
RORA-207ENST00000558234 PANK3Q9H999 370 aa15.86■□□□□ 0.13
RORA-207ENST00000558234 RGPD2P0DJD1 1756 aa15.86■□□□□ 0.13
RORA-207ENST00000558234 CPDO75976 1380 aa15.85■□□□□ 0.13
RORA-207ENST00000558234 PRKRIP1Q9H875 184 aaPredicted RBP15.85■□□□□ 0.13
RORA-207ENST00000558234 AATKQ6ZMQ8 1374 aa15.85■□□□□ 0.13
RORA-207ENST00000558234 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
RORA-207ENST00000558234 TERF2IPQ9NYB0 399 aa15.84■□□□□ 0.13
RORA-207ENST00000558234 NCAPD2Q15021 1401 aa15.84■□□□□ 0.13
RORA-207ENST00000558234 FYB1O15117 783 aa15.84■□□□□ 0.13
RORA-207ENST00000558234 FOXO3O43524 673 aa15.84■□□□□ 0.13
RORA-207ENST00000558234 SHANK3Q9BYB0 1731 aa15.83■□□□□ 0.12
RORA-207ENST00000558234 JCADQ9P266 1359 aa15.82■□□□□ 0.12
RORA-207ENST00000558234 INSRP06213 1382 aa15.81■□□□□ 0.12
RORA-207ENST00000558234 HSPA1LP34931 641 aa15.81■□□□□ 0.12
RORA-207ENST00000558234 SLIT2O94813 1529 aa15.81■□□□□ 0.12
RORA-207ENST00000558234 HDGFL2Q7Z4V5 671 aaPredicted RBP15.8■□□□□ 0.12
RORA-207ENST00000558234 CDK12Q9NYV4 1490 aaPredicted RBP15.8■□□□□ 0.12
RORA-207ENST00000558234 PSME1Q06323 249 aa15.79■□□□□ 0.12
RORA-207ENST00000558234 KIF24Q5T7B8 1368 aa15.78■□□□□ 0.12
RORA-207ENST00000558234 NME9Q86XW9 330 aa15.78■□□□□ 0.12
RORA-207ENST00000558234 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
RORA-207ENST00000558234 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.12
RORA-207ENST00000558234 THSD7AQ9UPZ6 1657 aa15.77■□□□□ 0.12
RORA-207ENST00000558234 CGNL1Q0VF96 1302 aa15.77■□□□□ 0.12
RORA-207ENST00000558234 LRRC59Q96AG4 307 aaKnown RBP15.77■□□□□ 0.12
RORA-207ENST00000558234 CCDC184Q52MB2 194 aa15.77■□□□□ 0.11
RORA-207ENST00000558234 SPATA31A6Q5VVP1 1343 aa15.77■□□□□ 0.11
RORA-207ENST00000558234 RTL1A6NKG5 1358 aa15.77■□□□□ 0.11
RORA-207ENST00000558234 PKD1L3Q7Z443 1732 aa15.76■□□□□ 0.11
RORA-207ENST00000558234 TMC1Q8TDI8 760 aa15.76■□□□□ 0.11
RORA-207ENST00000558234 PIP4K2BP78356 416 aa15.75■□□□□ 0.11
RORA-207ENST00000558234 XPCQ01831 940 aaPredicted RBP15.75■□□□□ 0.11
RORA-207ENST00000558234 PARP4Q9UKK3 1724 aaKnown RBP15.75■□□□□ 0.11
RORA-207ENST00000558234 ANP32CO43423 234 aa15.74■□□□□ 0.11
RORA-207ENST00000558234 COL5A2P05997 1499 aaPredicted RBP15.73■□□□□ 0.11
RORA-207ENST00000558234 ADAMTS7Q9UKP4 1686 aa15.73■□□□□ 0.11
RORA-207ENST00000558234 BCL9LQ86UU0 1499 aa15.73■□□□□ 0.11
RORA-207ENST00000558234 GLI3P10071 1580 aa15.73■□□□□ 0.11
RORA-207ENST00000558234 VIRMAQ69YN4 1812 aaKnown RBP15.72■□□□□ 0.11
RORA-207ENST00000558234 BLMP54132 1417 aaPredicted RBP15.72■□□□□ 0.11
RORA-207ENST00000558234 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
RORA-207ENST00000558234 LRRC37A3O60309 1634 aa15.7■□□□□ 0.1
RORA-207ENST00000558234 ABTB2Q8N961 1025 aa15.68■□□□□ 0.1
RORA-207ENST00000558234 GCP02774 474 aa15.68■□□□□ 0.1
RORA-207ENST00000558234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.68■□□□□ 0.1
RORA-207ENST00000558234 GGNBP2Q9H3C7 697 aa15.68■□□□□ 0.1
RORA-207ENST00000558234 NLRP13Q86W25 1043 aa15.67■□□□□ 0.1
RORA-207ENST00000558234 ATRNO75882 1429 aa15.67■□□□□ 0.1
RORA-207ENST00000558234 RALBP1Q15311 655 aa15.67■□□□□ 0.1
RORA-207ENST00000558234 KIAA0232Q92628 1395 aa15.67■□□□□ 0.1
RORA-207ENST00000558234 KNSTRNQ9Y448 316 aa15.66■□□□□ 0.1
RORA-207ENST00000558234 PLEKHG2Q9H7P9 1386 aa15.66■□□□□ 0.1
RORA-207ENST00000558234 POLKQ9UBT6 870 aa15.66■□□□□ 0.1
RORA-207ENST00000558234 DISP2A7MBM2 1401 aa15.65■□□□□ 0.1
RORA-207ENST00000558234 MYBBP1AQ9BQG0 1328 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms